RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 DDRGK1Q96HY6 314 aa12.73□□□□□ -0.37
PHC1-208ENST00000540574 HSP90AA1P07900 732 aaKnown RBP12.72□□□□□ -0.37
PHC1-208ENST00000540574 GCC2Q8IWJ2 1684 aa12.72□□□□□ -0.37
PHC1-208ENST00000540574 PER1O15534 1290 aaPredicted RBP12.72□□□□□ -0.37
PHC1-208ENST00000540574 OSCARQ8IYS5 282 aa12.72□□□□□ -0.37
PHC1-208ENST00000540574 TRAPPC8Q9Y2L5 1435 aa12.72□□□□□ -0.37
PHC1-208ENST00000540574 ITPRIPQ8IWB1 547 aa12.71□□□□□ -0.37
PHC1-208ENST00000540574 TCP11L2Q8N4U5 519 aa12.71□□□□□ -0.38
PHC1-208ENST00000540574 SMC4Q9NTJ3 1288 aa12.71□□□□□ -0.38
PHC1-208ENST00000540574 APBB1O00213 710 aa12.7□□□□□ -0.38
PHC1-208ENST00000540574 FAM135AQ9P2D6 1515 aa12.7□□□□□ -0.38
PHC1-208ENST00000540574 KDM5BQ9UGL1 1544 aa12.7□□□□□ -0.38
PHC1-208ENST00000540574 PRAG1Q86YV5 1406 aa12.69□□□□□ -0.38
PHC1-208ENST00000540574 RALGAPBQ86X10 1494 aa12.69□□□□□ -0.38
PHC1-208ENST00000540574 ITSN2Q9NZM3 1697 aa12.69□□□□□ -0.38
PHC1-208ENST00000540574 NUP160Q12769 1436 aa12.69□□□□□ -0.38
PHC1-208ENST00000540574 E9PSI1 815 aa12.68□□□□□ -0.38
PHC1-208ENST00000540574 TSR2Q969E8 191 aaKnown RBP12.68□□□□□ -0.38
PHC1-208ENST00000540574 FBLN1P23142 703 aa12.68□□□□□ -0.38
PHC1-208ENST00000540574 CFAP65Q6ZU64 1925 aaKnown RBP12.67□□□□□ -0.38
PHC1-208ENST00000540574 HMOX1P09601 288 aa12.67□□□□□ -0.38
PHC1-208ENST00000540574 CENPQQ7L2Z9 268 aaPredicted RBP12.67□□□□□ -0.38
PHC1-208ENST00000540574 CGNL1Q0VF96 1302 aa12.66□□□□□ -0.38
PHC1-208ENST00000540574 VGFO15240 615 aaPredicted RBP12.66□□□□□ -0.38
PHC1-208ENST00000540574 SPINK5Q9NQ38 1064 aaPredicted RBP12.66□□□□□ -0.38
PHC1-208ENST00000540574 HDGFL2Q7Z4V5 671 aaPredicted RBP12.65□□□□□ -0.38
PHC1-208ENST00000540574 BACH2Q9BYV9 841 aa12.65□□□□□ -0.38
PHC1-208ENST00000540574 EVC2Q86UK5 1308 aa12.65□□□□□ -0.38
PHC1-208ENST00000540574 EIF5BO60841 1220 aaKnown RBP12.65□□□□□ -0.38
PHC1-208ENST00000540574 AMER1Q5JTC6 1135 aaPredicted RBP12.65□□□□□ -0.38
PHC1-208ENST00000540574 DUSP27Q5VZP5 1158 aa12.64□□□□□ -0.39
PHC1-208ENST00000540574 MFAP1P55081 439 aaKnown RBP12.64□□□□□ -0.39
PHC1-208ENST00000540574 FAM161AQ3B820 660 aa12.64□□□□□ -0.39
PHC1-208ENST00000540574 A2MP01023 1474 aa12.64□□□□□ -0.39
PHC1-208ENST00000540574 FAM69CQ0P6D2 419 aa12.63□□□□□ -0.39
PHC1-208ENST00000540574 PRAM1Q96QH2 718 aa12.63□□□□□ -0.39
PHC1-208ENST00000540574 MYH16Q9H6N6 1097 aa12.63□□□□□ -0.39
PHC1-208ENST00000540574 RUNDC1Q96C34 613 aa12.63□□□□□ -0.39
PHC1-208ENST00000540574 TERF2IPQ9NYB0 399 aa12.63□□□□□ -0.39
PHC1-208ENST00000540574 PARD3Q8TEW0 1356 aa12.62□□□□□ -0.39
PHC1-208ENST00000540574 SLFN5Q08AF3 891 aa12.62□□□□□ -0.39
PHC1-208ENST00000540574 BECN1Q14457 450 aa12.62□□□□□ -0.39
PHC1-208ENST00000540574 ADGRL2O95490 1459 aa12.62□□□□□ -0.39
PHC1-208ENST00000540574 MBD5Q9P267 1494 aa12.62□□□□□ -0.39
PHC1-208ENST00000540574 RIPK4P57078 832 aa12.62□□□□□ -0.39
PHC1-208ENST00000540574 CARD14Q9BXL6 1004 aa12.62□□□□□ -0.39
PHC1-208ENST00000540574 DMRT2Q9Y5R5 561 aa12.62□□□□□ -0.39
PHC1-208ENST00000540574 FBXO31Q5XUX0 539 aaPredicted RBP12.62□□□□□ -0.39
PHC1-208ENST00000540574 PLEKHH1Q9ULM0 1364 aa12.61□□□□□ -0.39
PHC1-208ENST00000540574 GZF1Q9H116 711 aaPredicted RBP12.61□□□□□ -0.39
PHC1-208ENST00000540574 TNNQ9UQP3 1299 aa12.61□□□□□ -0.39
PHC1-208ENST00000540574 ABCC10Q5T3U5 1492 aa12.61□□□□□ -0.39
PHC1-208ENST00000540574 BCORL1Q5H9F3 1711 aa12.61□□□□□ -0.39
PHC1-208ENST00000540574 TPRNQ4KMQ1 711 aa12.61□□□□□ -0.39
PHC1-208ENST00000540574 WWC1Q8IX03 1113 aa12.61□□□□□ -0.39
PHC1-208ENST00000540574 NSD3Q9BZ95 1437 aa12.6□□□□□ -0.39
PHC1-208ENST00000540574 ADGRL1O94910 1474 aa12.6□□□□□ -0.39
PHC1-208ENST00000540574 PLCH2O75038 1416 aa12.6□□□□□ -0.39
PHC1-208ENST00000540574 LMOD2Q6P5Q4 547 aa12.6□□□□□ -0.39
PHC1-208ENST00000540574 FOXD4L1Q9NU39 408 aa12.6□□□□□ -0.39
PHC1-208ENST00000540574 FANCAO15360 1455 aa12.6□□□□□ -0.39
PHC1-208ENST00000540574 MS4A1P11836 297 aa12.59□□□□□ -0.39
PHC1-208ENST00000540574 EXOSC9Q06265 439 aaKnown RBP12.59□□□□□ -0.39
PHC1-208ENST00000540574 IDI1Q13907 227 aa12.59□□□□□ -0.39
PHC1-208ENST00000540574 RWDD1Q9H446 243 aaPredicted RBP12.59□□□□□ -0.39
PHC1-208ENST00000540574 CABP1Q9NZU7 370 aa12.59□□□□□ -0.39
PHC1-208ENST00000540574 NOS1P29475 1434 aa12.59□□□□□ -0.39
PHC1-208ENST00000540574 WAPLQ7Z5K2 1190 aa12.58□□□□□ -0.4
PHC1-208ENST00000540574 THUMPD2Q9BTF0 503 aaKnown RBP12.58□□□□□ -0.4
PHC1-208ENST00000540574 ERCC6L2Q5T890 1561 aa12.58□□□□□ -0.4
PHC1-208ENST00000540574 UHRF1BP1Q6BDS2 1440 aa12.58□□□□□ -0.4
PHC1-208ENST00000540574 LRPPRCP42704 1394 aaKnown RBP12.56□□□□□ -0.4
PHC1-208ENST00000540574 DIAPH1O60610 1272 aaKnown RBP12.56□□□□□ -0.4
PHC1-208ENST00000540574 ZKSCAN2Q63HK3 967 aa12.56□□□□□ -0.4
PHC1-208ENST00000540574 LTV1Q96GA3 475 aaPredicted RBP12.56□□□□□ -0.4
PHC1-208ENST00000540574 IGHDP01880 384 aa12.56□□□□□ -0.4
PHC1-208ENST00000540574 TXNDC2Q86VQ3 553 aa12.56□□□□□ -0.4
PHC1-208ENST00000540574 PMFBP1Q8TBY8 1022 aa12.55□□□□□ -0.4
PHC1-208ENST00000540574 C1orf115Q9H7X2 142 aa12.55□□□□□ -0.4
PHC1-208ENST00000540574 DZIP1LQ8IYY4 767 aaKnown RBP12.55□□□□□ -0.4
PHC1-208ENST00000540574 SHANK2Q9UPX8 1470 aa12.55□□□□□ -0.4
PHC1-208ENST00000540574 KDM5CP41229 1560 aa12.55□□□□□ -0.4
PHC1-208ENST00000540574 LNPKQ9C0E8 428 aa12.55□□□□□ -0.4
PHC1-208ENST00000540574 PLA2R1Q13018 1463 aa12.55□□□□□ -0.4
PHC1-208ENST00000540574 SAMD9LQ8IVG5 1584 aa12.55□□□□□ -0.4
PHC1-208ENST00000540574 SCAF11Q99590 1463 aaKnown RBP12.54□□□□□ -0.4
PHC1-208ENST00000540574 ABCA8O94911 1581 aa12.54□□□□□ -0.4
PHC1-208ENST00000540574 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.53□□□□□ -0.4
PHC1-208ENST00000540574 PRKAR2BP31323 418 aa12.53□□□□□ -0.4
PHC1-208ENST00000540574 NFKBIBQ15653 356 aa12.53□□□□□ -0.4
PHC1-208ENST00000540574 NECTIN2Q92692 538 aa12.53□□□□□ -0.4
PHC1-208ENST00000540574 STAC3Q96MF2 364 aa12.53□□□□□ -0.4
PHC1-208ENST00000540574 CD109Q6YHK3 1445 aa12.53□□□□□ -0.4
PHC1-208ENST00000540574 CDC42BPAQ5VT25 1732 aa12.53□□□□□ -0.4
PHC1-208ENST00000540574 SLC4A10Q6U841 1118 aa12.53□□□□□ -0.4
PHC1-208ENST00000540574 CDK19Q9BWU1 502 aa12.53□□□□□ -0.4
PHC1-208ENST00000540574 NUTM2GQ5VZR2 741 aa12.53□□□□□ -0.4
PHC1-208ENST00000540574 PDZRN3Q9UPQ7 1066 aa12.53□□□□□ -0.4
PHC1-208ENST00000540574 ADGBQ8N7X0 1667 aa12.53□□□□□ -0.4
PHC1-208ENST00000540574 FRAT2O75474 233 aaPredicted RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms