RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 DCAF11Q8TEB1 546 aa14.31□□□□□ -0.12
POLR1B-216ENST00000537335 GTPBP4Q9BZE4 634 aaKnown RBP14.3□□□□□ -0.12
POLR1B-216ENST00000537335 MYBBP1AQ9BQG0 1328 aaKnown RBP14.3□□□□□ -0.12
POLR1B-216ENST00000537335 ERLIN1O75477 346 aa14.3□□□□□ -0.12
POLR1B-216ENST00000537335 INCENPQ9NQS7 918 aa14.3□□□□□ -0.12
POLR1B-216ENST00000537335 PRPF40AO75400 957 aaKnown RBP14.29□□□□□ -0.12
POLR1B-216ENST00000537335 PPP4R3BQ5MIZ7 849 aa14.29□□□□□ -0.12
POLR1B-216ENST00000537335 PAXIP1Q6ZW49 1069 aaPredicted RBP14.29□□□□□ -0.12
POLR1B-216ENST00000537335 GPATCH3Q96I76 525 aa14.29□□□□□ -0.12
POLR1B-216ENST00000537335 RAB3GAP2Q9H2M9 1393 aa14.29□□□□□ -0.12
POLR1B-216ENST00000537335 RBM25P49756 843 aaKnown RBP14.29□□□□□ -0.12
POLR1B-216ENST00000537335 NBPF1Q3BBV0 1214 aa14.29□□□□□ -0.12
POLR1B-216ENST00000537335 RASSF8Q8NHQ8 419 aa14.29□□□□□ -0.12
POLR1B-216ENST00000537335 C11orf95C9JLR9 678 aaPredicted RBP14.28□□□□□ -0.12
POLR1B-216ENST00000537335 U2AF1L5P0DN76 240 aaPredicted RBP14.28□□□□□ -0.12
POLR1B-216ENST00000537335 U2AF1Q01081 240 aaKnown RBP eCLIP14.28□□□□□ -0.12
POLR1B-216ENST00000537335 ANKRD20A12PQ8NF67 263 aa14.28□□□□□ -0.12
POLR1B-216ENST00000537335 CEP164Q9UPV0 1460 aa14.28□□□□□ -0.12
POLR1B-216ENST00000537335 TNNT1P13805 278 aa14.28□□□□□ -0.12
POLR1B-216ENST00000537335 NAT10Q9H0A0 1025 aaKnown RBP14.27□□□□□ -0.12
POLR1B-216ENST00000537335 ESF1Q9H501 851 aaKnown RBP14.27□□□□□ -0.12
POLR1B-216ENST00000537335 PABPN1Q86U42 306 aaKnown RBP eCLIP14.27□□□□□ -0.12
POLR1B-216ENST00000537335 SPC24Q8NBT2 197 aa14.27□□□□□ -0.12
POLR1B-216ENST00000537335 CENPHQ9H3R5 247 aa14.27□□□□□ -0.12
POLR1B-216ENST00000537335 FAM107BQ9H098 131 aa14.26□□□□□ -0.13
POLR1B-216ENST00000537335 DHX8Q14562 1220 aaKnown RBP14.26□□□□□ -0.13
POLR1B-216ENST00000537335 ZKSCAN2Q63HK3 967 aa14.26□□□□□ -0.13
POLR1B-216ENST00000537335 TMCO3Q6UWJ1 677 aa14.26□□□□□ -0.13
POLR1B-216ENST00000537335 CCDC73Q6ZRK6 1079 aa14.26□□□□□ -0.13
POLR1B-216ENST00000537335 KIF15Q9NS87 1388 aa14.26□□□□□ -0.13
POLR1B-216ENST00000537335 XPCQ01831 940 aaPredicted RBP14.26□□□□□ -0.13
POLR1B-216ENST00000537335 SMAP1Q8IYB5 467 aaPredicted RBP14.25□□□□□ -0.13
POLR1B-216ENST00000537335 SMC3Q9UQE7 1217 aa14.25□□□□□ -0.13
POLR1B-216ENST00000537335 SCRIBQ14160 1630 aa14.25□□□□□ -0.13
POLR1B-216ENST00000537335 GTF2F1P35269 517 aaKnown RBP eCLIP14.25□□□□□ -0.13
POLR1B-216ENST00000537335 ZRSR2Q15696 482 aaKnown RBP14.25□□□□□ -0.13
POLR1B-216ENST00000537335 MPNDQ8N594 471 aa14.25□□□□□ -0.13
POLR1B-216ENST00000537335 VPS37CA5D8V6 355 aaPredicted RBP14.24□□□□□ -0.13
POLR1B-216ENST00000537335 AAMPQ13685 434 aa14.24□□□□□ -0.13
POLR1B-216ENST00000537335 CCDC146Q8IYE0 955 aa14.24□□□□□ -0.13
POLR1B-216ENST00000537335 CAGE1Q8TC20 777 aa14.24□□□□□ -0.13
POLR1B-216ENST00000537335 UBXN4Q92575 508 aa14.24□□□□□ -0.13
POLR1B-216ENST00000537335 CIZ1Q9ULV3 898 aaPredicted RBP14.24□□□□□ -0.13
POLR1B-216ENST00000537335 MCM5P33992 734 aa14.23□□□□□ -0.13
POLR1B-216ENST00000537335 CTR9Q6PD62 1173 aa14.23□□□□□ -0.13
POLR1B-216ENST00000537335 DDX11Q96FC9 970 aa14.23□□□□□ -0.13
POLR1B-216ENST00000537335 RILPL2Q969X0 211 aa14.23□□□□□ -0.13
POLR1B-216ENST00000537335 SSR1P43307 286 aaKnown RBP14.23□□□□□ -0.13
POLR1B-216ENST00000537335 MEX3CQ5U5Q3 659 aaKnown RBP14.23□□□□□ -0.13
POLR1B-216ENST00000537335 HOOK1Q9UJC3 728 aaKnown RBP14.22□□□□□ -0.13
POLR1B-216ENST00000537335 DHX57Q6P158 1386 aaKnown RBP14.22□□□□□ -0.13
POLR1B-216ENST00000537335 SPDYE4A6NLX3 237 aa14.21□□□□□ -0.13
POLR1B-216ENST00000537335 INTS3Q68E01 1043 aaKnown RBP14.21□□□□□ -0.13
POLR1B-216ENST00000537335 DDX19BQ9UMR2 479 aa14.21□□□□□ -0.13
POLR1B-216ENST00000537335 CT47A1Q5JQC4 288 aaPredicted RBP14.21□□□□□ -0.14
POLR1B-216ENST00000537335 CCDC102AQ96A19 550 aa14.21□□□□□ -0.14
POLR1B-216ENST00000537335 EIF3AQ14152 1382 aaKnown RBP14.2□□□□□ -0.14
POLR1B-216ENST00000537335 MNAT1P51948 309 aa14.2□□□□□ -0.14
POLR1B-216ENST00000537335 PRIMPOLQ96LW4 560 aa14.2□□□□□ -0.14
POLR1B-216ENST00000537335 PDILTQ8N807 584 aa14.2□□□□□ -0.14
POLR1B-216ENST00000537335 PCMTD1Q96MG8 357 aaPredicted RBP14.2□□□□□ -0.14
POLR1B-216ENST00000537335 KIF20AO95235 890 aa14.2□□□□□ -0.14
POLR1B-216ENST00000537335 TDO2P48775 406 aa14.2□□□□□ -0.14
POLR1B-216ENST00000537335 NOL10Q9BSC4 688 aaKnown RBP14.2□□□□□ -0.14
POLR1B-216ENST00000537335 KIF2AO00139 706 aaPredicted RBP14.2□□□□□ -0.14
POLR1B-216ENST00000537335 CCDC192P0DO97 292 aa14.2□□□□□ -0.14
POLR1B-216ENST00000537335 NEXNQ0ZGT2 675 aa14.2□□□□□ -0.14
POLR1B-216ENST00000537335 BCL2L13Q9BXK5 485 aa14.2□□□□□ -0.14
POLR1B-216ENST00000537335 TTLL5Q6EMB2 1281 aa14.19□□□□□ -0.14
POLR1B-216ENST00000537335 DNAAF4Q8WXU2 420 aa14.19□□□□□ -0.14
POLR1B-216ENST00000537335 HDAC5Q9UQL6 1122 aa14.19□□□□□ -0.14
POLR1B-216ENST00000537335 SHTN1A0MZ66 631 aa14.19□□□□□ -0.14
POLR1B-216ENST00000537335 ZKSCAN1P17029 563 aaPredicted RBP14.19□□□□□ -0.14
POLR1B-216ENST00000537335 C14orf37Q86TY3 774 aa14.19□□□□□ -0.14
POLR1B-216ENST00000537335 NCBP3Q53F19 620 aaKnown RBP14.19□□□□□ -0.14
POLR1B-216ENST00000537335 FBXW7Q969H0 707 aa14.19□□□□□ -0.14
POLR1B-216ENST00000537335 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.18□□□□□ -0.14
POLR1B-216ENST00000537335 TICAM2Q86XR7 235 aa14.18□□□□□ -0.14
POLR1B-216ENST00000537335 VPS8Q8N3P4 1428 aa14.18□□□□□ -0.14
POLR1B-216ENST00000537335 LMOD3Q0VAK6 560 aa14.18□□□□□ -0.14
POLR1B-216ENST00000537335 RTF1Q92541 710 aaKnown RBP14.18□□□□□ -0.14
POLR1B-216ENST00000537335 CCDC94Q9BW85 323 aaPredicted RBP14.18□□□□□ -0.14
POLR1B-216ENST00000537335 CWC22Q9HCG8 908 aaKnown RBP14.18□□□□□ -0.14
POLR1B-216ENST00000537335 GOLGA6L10A6NI86 522 aa14.17□□□□□ -0.14
POLR1B-216ENST00000537335 SMC2O95347 1197 aa14.17□□□□□ -0.14
POLR1B-216ENST00000537335 SDF4Q9BRK5 362 aa14.17□□□□□ -0.14
POLR1B-216ENST00000537335 CFDP1Q9UEE9 299 aaPredicted RBP14.17□□□□□ -0.14
POLR1B-216ENST00000537335 CLGNO14967 610 aa14.17□□□□□ -0.14
POLR1B-216ENST00000537335 POLR3GO15318 223 aaPredicted RBP14.17□□□□□ -0.14
POLR1B-216ENST00000537335 FILIP1Q7Z7B0 1213 aa14.17□□□□□ -0.14
POLR1B-216ENST00000537335 ZNF526Q8TF50 670 aaPredicted RBP14.17□□□□□ -0.14
POLR1B-216ENST00000537335 STK31Q9BXU1 1019 aa14.17□□□□□ -0.14
POLR1B-216ENST00000537335 KRT222Q8N1A0 295 aa14.16□□□□□ -0.14
POLR1B-216ENST00000537335 LRRCC1Q9C099 1032 aa14.16□□□□□ -0.14
POLR1B-216ENST00000537335 ANO2Q9NQ90 1003 aa14.16□□□□□ -0.14
POLR1B-216ENST00000537335 IBSPP21815 317 aaPredicted RBP14.16□□□□□ -0.14
POLR1B-216ENST00000537335 RABEP1Q15276 862 aa14.16□□□□□ -0.14
POLR1B-216ENST00000537335 TXLNBQ8N3L3 684 aa14.16□□□□□ -0.14
POLR1B-216ENST00000537335 RUFY2Q8WXA3 655 aa14.16□□□□□ -0.14
POLR1B-216ENST00000537335 L3MBTL2Q969R5 705 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms