RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 ADGRL2O95490 1459 aa13.58□□□□□ -0.24
CCDC90B-219ENST00000534753 ANKRD50Q9ULJ7 1429 aa13.57□□□□□ -0.24
CCDC90B-219ENST00000534753 CERKQ8TCT0 537 aa13.57□□□□□ -0.24
CCDC90B-219ENST00000534753 CLEC11AQ9Y240 323 aa13.57□□□□□ -0.24
CCDC90B-219ENST00000534753 PRDM15P57071 1507 aaPredicted RBP13.57□□□□□ -0.24
CCDC90B-219ENST00000534753 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCDC90B-219ENST00000534753 ERVK-7P63135 1459 aa13.56□□□□□ -0.24
CCDC90B-219ENST00000534753 THEMISQ8N1K5 641 aaPredicted RBP13.56□□□□□ -0.24
CCDC90B-219ENST00000534753 PTPRTO14522 1441 aa13.56□□□□□ -0.24
CCDC90B-219ENST00000534753 SPDYE1Q8NFV5 336 aaPredicted RBP13.55□□□□□ -0.24
CCDC90B-219ENST00000534753 FBXO41Q8TF61 875 aa13.55□□□□□ -0.24
CCDC90B-219ENST00000534753 UGGT1Q9NYU2 1555 aa13.54□□□□□ -0.24
CCDC90B-219ENST00000534753 DEPDC5O75140 1603 aa13.54□□□□□ -0.24
CCDC90B-219ENST00000534753 ANKLE2Q86XL3 938 aa13.54□□□□□ -0.24
CCDC90B-219ENST00000534753 NLRP1Q9C000 1473 aa13.54□□□□□ -0.24
CCDC90B-219ENST00000534753 REM2Q8IYK8 340 aaPredicted RBP13.53□□□□□ -0.24
CCDC90B-219ENST00000534753 PLA2R1Q13018 1463 aa13.53□□□□□ -0.24
CCDC90B-219ENST00000534753 SPATA31D1Q6ZQQ2 1576 aa13.53□□□□□ -0.24
CCDC90B-219ENST00000534753 ZBTB47Q9UFB7 747 aaPredicted RBP13.52□□□□□ -0.25
CCDC90B-219ENST00000534753 ROCK1Q13464 1354 aa13.51□□□□□ -0.25
CCDC90B-219ENST00000534753 ZNF335Q9H4Z2 1342 aaPredicted RBP13.51□□□□□ -0.25
CCDC90B-219ENST00000534753 ARHGAP31Q2M1Z3 1444 aa13.5□□□□□ -0.25
CCDC90B-219ENST00000534753 HAP1P54257 671 aaPredicted RBP13.49□□□□□ -0.25
CCDC90B-219ENST00000534753 RRBP1Q9P2E9 1410 aaKnown RBP13.48□□□□□ -0.25
CCDC90B-219ENST00000534753 NUP155O75694 1391 aa13.48□□□□□ -0.25
CCDC90B-219ENST00000534753 POLR1AO95602 1720 aaPredicted RBP13.48□□□□□ -0.25
CCDC90B-219ENST00000534753 IDI1Q13907 227 aa13.48□□□□□ -0.25
CCDC90B-219ENST00000534753 VWDEQ8N2E2 1590 aa13.48□□□□□ -0.25
CCDC90B-219ENST00000534753 LMTK2Q8IWU2 1503 aa13.48□□□□□ -0.25
CCDC90B-219ENST00000534753 CHGAP10645 457 aaKnown RBP13.47□□□□□ -0.25
CCDC90B-219ENST00000534753 TXNDC2Q86VQ3 553 aa13.47□□□□□ -0.25
CCDC90B-219ENST00000534753 CREBZFQ9NS37 354 aa13.47□□□□□ -0.25
CCDC90B-219ENST00000534753 EFCAB6Q5THR3 1501 aa13.47□□□□□ -0.25
CCDC90B-219ENST00000534753 EID1Q9Y6B2 187 aa13.46□□□□□ -0.25
CCDC90B-219ENST00000534753 UBR1Q8IWV7 1749 aa13.46□□□□□ -0.25
CCDC90B-219ENST00000534753 NPHP4O75161 1426 aaPredicted RBP13.46□□□□□ -0.26
CCDC90B-219ENST00000534753 PIK3C2BO00750 1634 aa13.46□□□□□ -0.26
CCDC90B-219ENST00000534753 NEURL4Q96JN8 1562 aa13.45□□□□□ -0.26
CCDC90B-219ENST00000534753 PRR29P0C7W0 189 aa13.45□□□□□ -0.26
CCDC90B-219ENST00000534753 TRIM52Q96A61 297 aa13.45□□□□□ -0.26
CCDC90B-219ENST00000534753 BCANQ96GW7 911 aa13.45□□□□□ -0.26
CCDC90B-219ENST00000534753 UNC13BO14795 1591 aa13.45□□□□□ -0.26
CCDC90B-219ENST00000534753 LTBP4Q8N2S1 1624 aa13.44□□□□□ -0.26
CCDC90B-219ENST00000534753 NUBP1P53384 320 aa13.44□□□□□ -0.26
CCDC90B-219ENST00000534753 SYNMO15061 1565 aa13.44□□□□□ -0.26
CCDC90B-219ENST00000534753 TET3O43151 1660 aa13.44□□□□□ -0.26
CCDC90B-219ENST00000534753 LTKP29376 864 aa13.43□□□□□ -0.26
CCDC90B-219ENST00000534753 SLC52A1Q9NWF4 448 aa13.42□□□□□ -0.26
CCDC90B-219ENST00000534753 IQGAP1P46940 1657 aa13.41□□□□□ -0.26
CCDC90B-219ENST00000534753 GCC2Q8IWJ2 1684 aa13.41□□□□□ -0.26
CCDC90B-219ENST00000534753 NOS1P29475 1434 aa13.41□□□□□ -0.26
CCDC90B-219ENST00000534753 RPRD2Q5VT52 1461 aaKnown RBP13.41□□□□□ -0.26
CCDC90B-219ENST00000534753 SCAF11Q99590 1463 aaKnown RBP13.41□□□□□ -0.26
CCDC90B-219ENST00000534753 E9PCH4 1651 aa13.4□□□□□ -0.26
CCDC90B-219ENST00000534753 IQGAP3Q86VI3 1631 aa13.4□□□□□ -0.26
CCDC90B-219ENST00000534753 UBAP1LF5GYI3 381 aa13.4□□□□□ -0.26
CCDC90B-219ENST00000534753 PITPNM1O00562 1244 aa13.4□□□□□ -0.26
CCDC90B-219ENST00000534753 TMEM2Q9UHN6 1383 aa13.4□□□□□ -0.26
CCDC90B-219ENST00000534753 NAIPQ13075 1403 aa13.39□□□□□ -0.27
CCDC90B-219ENST00000534753 PPP1R15AO75807 674 aaPredicted RBP13.39□□□□□ -0.27
CCDC90B-219ENST00000534753 MNX1P50219 401 aaPredicted RBP13.39□□□□□ -0.27
CCDC90B-219ENST00000534753 NUTM2DQ5VT03 806 aaPredicted RBP13.39□□□□□ -0.27
CCDC90B-219ENST00000534753 BBXQ8WY36 941 aaPredicted RBP13.39□□□□□ -0.27
CCDC90B-219ENST00000534753 MED14O60244 1454 aa13.38□□□□□ -0.27
CCDC90B-219ENST00000534753 ADGRB3O60242 1522 aa13.38□□□□□ -0.27
CCDC90B-219ENST00000534753 SLIT1O75093 1534 aa13.38□□□□□ -0.27
CCDC90B-219ENST00000534753 SLC26A8Q96RN1 970 aa13.37□□□□□ -0.27
CCDC90B-219ENST00000534753 ARHGAP23Q9P227 1491 aa13.36□□□□□ -0.27
CCDC90B-219ENST00000534753 PAXIP1Q6ZW49 1069 aaPredicted RBP13.36□□□□□ -0.27
CCDC90B-219ENST00000534753 PIP4K2BP78356 416 aa13.35□□□□□ -0.27
CCDC90B-219ENST00000534753 ZNF326Q5BKZ1 582 aaKnown RBP13.35□□□□□ -0.27
CCDC90B-219ENST00000534753 DCAF8Q5TAQ9 597 aa13.35□□□□□ -0.27
CCDC90B-219ENST00000534753 RNF25Q96BH1 459 aaPredicted RBP13.35□□□□□ -0.27
CCDC90B-219ENST00000534753 HFM1A2PYH4 1435 aa13.35□□□□□ -0.27
CCDC90B-219ENST00000534753 MYO5BQ9ULV0 1848 aa13.34□□□□□ -0.27
CCDC90B-219ENST00000534753 HDGFP51858 240 aaKnown RBP13.34□□□□□ -0.27
CCDC90B-219ENST00000534753 CFAP44Q96MT7 982 aa13.34□□□□□ -0.27
CCDC90B-219ENST00000534753 CPS1P31327 1500 aa13.34□□□□□ -0.27
CCDC90B-219ENST00000534753 RIMS2Q9UQ26 1411 aa13.33□□□□□ -0.28
CCDC90B-219ENST00000534753 GSE1Q14687 1217 aa13.33□□□□□ -0.28
CCDC90B-219ENST00000534753 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.33□□□□□ -0.28
CCDC90B-219ENST00000534753 KDM5AP29375 1690 aaKnown RBP13.33□□□□□ -0.28
CCDC90B-219ENST00000534753 IQSEC2Q5JU85 1478 aa13.32□□□□□ -0.28
CCDC90B-219ENST00000534753 TMEM131LA2VDJ0 1609 aa13.31□□□□□ -0.28
CCDC90B-219ENST00000534753 RBM33Q96EV2 1170 aaKnown RBP13.31□□□□□ -0.28
CCDC90B-219ENST00000534753 SPHKAPQ2M3C7 1700 aa13.3□□□□□ -0.28
CCDC90B-219ENST00000534753 STRCP1A6NGW2 1772 aa13.3□□□□□ -0.28
CCDC90B-219ENST00000534753 TOM1O60784 492 aa13.3□□□□□ -0.28
CCDC90B-219ENST00000534753 RASEFQ8IZ41 740 aa13.3□□□□□ -0.28
CCDC90B-219ENST00000534753 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.3□□□□□ -0.28
CCDC90B-219ENST00000534753 PROSER2Q86WR7 435 aaPredicted RBP13.28□□□□□ -0.28
CCDC90B-219ENST00000534753 ZFYVE9O95405 1425 aa13.28□□□□□ -0.28
CCDC90B-219ENST00000534753 LRRC7Q96NW7 1537 aa13.28□□□□□ -0.28
CCDC90B-219ENST00000534753 PLEKHG1Q9ULL1 1385 aa13.27□□□□□ -0.29
CCDC90B-219ENST00000534753 KCNA6P17658 529 aa13.26□□□□□ -0.29
CCDC90B-219ENST00000534753 CLTCL1P53675 1640 aa13.25□□□□□ -0.29
CCDC90B-219ENST00000534753 SETD5Q9C0A6 1442 aa13.25□□□□□ -0.29
CCDC90B-219ENST00000534753 CHADLQ6NUI6 762 aa13.25□□□□□ -0.29
CCDC90B-219ENST00000534753 FAM212AQ96EL1 285 aa13.25□□□□□ -0.29
CCDC90B-219ENST00000534753 MPHOSPH9Q99550 1183 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms