RNA–Protein interactions for RNA: ENST00000534477.5

LINC00958-207, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 888 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-207ENST00000534477 CHIC2Q9UKJ5 165 aa12.49□□□□□ -0.41
LINC00958-207ENST00000534477 PTPN23Q9H3S7 1636 aa12.48□□□□□ -0.41
LINC00958-207ENST00000534477 CPS1P31327 1500 aa12.48□□□□□ -0.41
LINC00958-207ENST00000534477 DUOX2Q9NRD8 1548 aa12.48□□□□□ -0.41
LINC00958-207ENST00000534477 ERVK-7P63135 1459 aa12.48□□□□□ -0.41
LINC00958-207ENST00000534477 TOM1O60784 492 aa12.48□□□□□ -0.41
LINC00958-207ENST00000534477 HSPA1LP34931 641 aa12.48□□□□□ -0.41
LINC00958-207ENST00000534477 IQGAP1P46940 1657 aa12.48□□□□□ -0.41
LINC00958-207ENST00000534477 MROH1Q8NDA8 1641 aa12.48□□□□□ -0.41
LINC00958-207ENST00000534477 MAP3K1Q13233 1512 aa12.47□□□□□ -0.41
LINC00958-207ENST00000534477 SOCS7O14512 581 aa12.47□□□□□ -0.41
LINC00958-207ENST00000534477 CROCC2H7BZ55 1655 aa12.46□□□□□ -0.41
LINC00958-207ENST00000534477 CLEC11AQ9Y240 323 aa12.46□□□□□ -0.41
LINC00958-207ENST00000534477 VWDEQ8N2E2 1590 aa12.46□□□□□ -0.42
LINC00958-207ENST00000534477 ABCC5O15440 1437 aa12.45□□□□□ -0.42
LINC00958-207ENST00000534477 REM2Q8IYK8 340 aaPredicted RBP12.45□□□□□ -0.42
LINC00958-207ENST00000534477 DEPDC5O75140 1603 aa12.44□□□□□ -0.42
LINC00958-207ENST00000534477 FAM50AQ14320 339 aaKnown RBP12.44□□□□□ -0.42
LINC00958-207ENST00000534477 DAPK1P53355 1430 aa12.44□□□□□ -0.42
LINC00958-207ENST00000534477 KANK1Q14678 1352 aa12.43□□□□□ -0.42
LINC00958-207ENST00000534477 UBR1Q8IWV7 1749 aa12.43□□□□□ -0.42
LINC00958-207ENST00000534477 TXNDC2Q86VQ3 553 aa12.43□□□□□ -0.42
LINC00958-207ENST00000534477 FGD6Q6ZV73 1430 aa12.43□□□□□ -0.42
LINC00958-207ENST00000534477 MED14O60244 1454 aa12.42□□□□□ -0.42
LINC00958-207ENST00000534477 SCAF11Q99590 1463 aaKnown RBP12.42□□□□□ -0.42
LINC00958-207ENST00000534477 ERBINQ96RT1 1412 aa12.42□□□□□ -0.42
LINC00958-207ENST00000534477 PRDM15P57071 1507 aaPredicted RBP12.42□□□□□ -0.42
LINC00958-207ENST00000534477 STRCP1A6NGW2 1772 aa12.41□□□□□ -0.42
LINC00958-207ENST00000534477 EID1Q9Y6B2 187 aa12.41□□□□□ -0.42
LINC00958-207ENST00000534477 ANKRD30AQ9BXX3 1397 aa12.41□□□□□ -0.42
LINC00958-207ENST00000534477 PRR29P0C7W0 189 aa12.4□□□□□ -0.42
LINC00958-207ENST00000534477 LTKP29376 864 aa12.4□□□□□ -0.42
LINC00958-207ENST00000534477 BCANQ96GW7 911 aa12.4□□□□□ -0.42
LINC00958-207ENST00000534477 PIK3C2BO00750 1634 aa12.4□□□□□ -0.42
LINC00958-207ENST00000534477 LRRC7Q96NW7 1537 aa12.39□□□□□ -0.43
LINC00958-207ENST00000534477 MED1Q15648 1581 aaPredicted RBP12.39□□□□□ -0.43
LINC00958-207ENST00000534477 ECM2O94769 699 aaPredicted RBP12.38□□□□□ -0.43
LINC00958-207ENST00000534477 SYNMO15061 1565 aa12.36□□□□□ -0.43
LINC00958-207ENST00000534477 ARHGAP31Q2M1Z3 1444 aa12.36□□□□□ -0.43
LINC00958-207ENST00000534477 IDI1Q13907 227 aa12.35□□□□□ -0.43
LINC00958-207ENST00000534477 RBM33Q96EV2 1170 aaKnown RBP12.35□□□□□ -0.43
LINC00958-207ENST00000534477 ALKQ9UM73 1620 aa12.35□□□□□ -0.43
LINC00958-207ENST00000534477 TMEM2Q9UHN6 1383 aa12.34□□□□□ -0.43
LINC00958-207ENST00000534477 SLIT1O75093 1534 aa12.34□□□□□ -0.43
LINC00958-207ENST00000534477 EFCAB6Q5THR3 1501 aa12.34□□□□□ -0.43
LINC00958-207ENST00000534477 SLC26A8Q96RN1 970 aa12.34□□□□□ -0.43
LINC00958-207ENST00000534477 ARHGAP23Q9P227 1491 aa12.34□□□□□ -0.43
LINC00958-207ENST00000534477 CHGAP10645 457 aaKnown RBP12.33□□□□□ -0.44
LINC00958-207ENST00000534477 ITGAEP38570 1179 aa12.33□□□□□ -0.44
LINC00958-207ENST00000534477 PPARGC1BQ86YN6 1023 aaKnown RBP12.33□□□□□ -0.44
LINC00958-207ENST00000534477 PITPNM1O00562 1244 aa12.32□□□□□ -0.44
LINC00958-207ENST00000534477 CHRDL2Q6WN34 429 aa12.32□□□□□ -0.44
LINC00958-207ENST00000534477 CIZ1Q9ULV3 898 aaPredicted RBP12.32□□□□□ -0.44
LINC00958-207ENST00000534477 ANKRD50Q9ULJ7 1429 aa12.31□□□□□ -0.44
LINC00958-207ENST00000534477 PPP1R15AO75807 674 aaPredicted RBP12.31□□□□□ -0.44
LINC00958-207ENST00000534477 PROSER2Q86WR7 435 aaPredicted RBP12.31□□□□□ -0.44
LINC00958-207ENST00000534477 ADGRB3O60242 1522 aa12.3□□□□□ -0.44
LINC00958-207ENST00000534477 LMTK2Q8IWU2 1503 aa12.3□□□□□ -0.44
LINC00958-207ENST00000534477 XIRP1Q702N8 1843 aaKnown RBP12.3□□□□□ -0.44
LINC00958-207ENST00000534477 TMEM94Q12767 1356 aa12.3□□□□□ -0.44
LINC00958-207ENST00000534477 NUTM2DQ5VT03 806 aaPredicted RBP12.29□□□□□ -0.44
LINC00958-207ENST00000534477 CREBZFQ9NS37 354 aa12.29□□□□□ -0.44
LINC00958-207ENST00000534477 ADGRL2O95490 1459 aa12.28□□□□□ -0.44
LINC00958-207ENST00000534477 NOS1P29475 1434 aa12.28□□□□□ -0.44
LINC00958-207ENST00000534477 MYO5BQ9ULV0 1848 aa12.27□□□□□ -0.44
LINC00958-207ENST00000534477 GCC2Q8IWJ2 1684 aa12.27□□□□□ -0.45
LINC00958-207ENST00000534477 KCNA6P17658 529 aa12.26□□□□□ -0.45
LINC00958-207ENST00000534477 C14orf37Q86TY3 774 aa12.26□□□□□ -0.45
LINC00958-207ENST00000534477 SLC52A1Q9NWF4 448 aa12.26□□□□□ -0.45
LINC00958-207ENST00000534477 RIMS2Q9UQ26 1411 aa12.25□□□□□ -0.45
LINC00958-207ENST00000534477 TET3O43151 1660 aa12.25□□□□□ -0.45
LINC00958-207ENST00000534477 KDM5AP29375 1690 aaKnown RBP12.25□□□□□ -0.45
LINC00958-207ENST00000534477 GSE1Q14687 1217 aa12.24□□□□□ -0.45
LINC00958-207ENST00000534477 ROBO1Q9Y6N7 1651 aa12.23□□□□□ -0.45
LINC00958-207ENST00000534477 MSH6P52701 1360 aa12.23□□□□□ -0.45
LINC00958-207ENST00000534477 POTEHQ6S545 545 aa12.23□□□□□ -0.45
LINC00958-207ENST00000534477 RPRD2Q5VT52 1461 aaKnown RBP12.22□□□□□ -0.45
LINC00958-207ENST00000534477 HDGFP51858 240 aaKnown RBP12.22□□□□□ -0.45
LINC00958-207ENST00000534477 UNC13BO14795 1591 aa12.22□□□□□ -0.45
LINC00958-207ENST00000534477 NUBP1P53384 320 aa12.21□□□□□ -0.45
LINC00958-207ENST00000534477 E9PCH4 1651 aa12.21□□□□□ -0.45
LINC00958-207ENST00000534477 NKTRP30414 1462 aaKnown RBP12.21□□□□□ -0.46
LINC00958-207ENST00000534477 NUP155O75694 1391 aa12.2□□□□□ -0.46
LINC00958-207ENST00000534477 PLEKHG1Q9ULL1 1385 aa12.2□□□□□ -0.46
LINC00958-207ENST00000534477 TMEM131LA2VDJ0 1609 aa12.2□□□□□ -0.46
LINC00958-207ENST00000534477 RGL2O15211 777 aa12.2□□□□□ -0.46
LINC00958-207ENST00000534477 NWD1Q149M9 1564 aa12.2□□□□□ -0.46
LINC00958-207ENST00000534477 ZFYVE9O95405 1425 aa12.2□□□□□ -0.46
LINC00958-207ENST00000534477 FAM135BQ49AJ0 1406 aa12.2□□□□□ -0.46
LINC00958-207ENST00000534477 MNX1P50219 401 aaPredicted RBP12.19□□□□□ -0.46
LINC00958-207ENST00000534477 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.19□□□□□ -0.46
LINC00958-207ENST00000534477 FAM212AQ96EL1 285 aa12.19□□□□□ -0.46
LINC00958-207ENST00000534477 PLCB2Q00722 1185 aa12.18□□□□□ -0.46
LINC00958-207ENST00000534477 ZNF326Q5BKZ1 582 aaKnown RBP12.18□□□□□ -0.46
LINC00958-207ENST00000534477 SLAIN2Q9P270 581 aa12.18□□□□□ -0.46
LINC00958-207ENST00000534477 PHLPP1O60346 1717 aa12.17□□□□□ -0.46
LINC00958-207ENST00000534477 CHD2O14647 1828 aaKnown RBP12.17□□□□□ -0.46
LINC00958-207ENST00000534477 RGS17Q9UGC6 210 aaPredicted RBP12.17□□□□□ -0.46
LINC00958-207ENST00000534477 IQGAP3Q86VI3 1631 aa12.17□□□□□ -0.46
LINC00958-207ENST00000534477 ROCK1Q13464 1354 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms