RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 PANK1Q8TE04 598 aa15.69■□□□□ 0.1
RAD50-209ENST00000533482 FAM161AQ3B820 660 aa15.68■□□□□ 0.1
RAD50-209ENST00000533482 CUL7Q14999 1698 aa15.67■□□□□ 0.1
RAD50-209ENST00000533482 PRAM1Q96QH2 718 aa15.67■□□□□ 0.1
RAD50-209ENST00000533482 MAPKBP1O60336 1514 aa15.67■□□□□ 0.1
RAD50-209ENST00000533482 MAP3K1Q13233 1512 aa15.67■□□□□ 0.1
RAD50-209ENST00000533482 RIPK4P57078 832 aa15.67■□□□□ 0.1
RAD50-209ENST00000533482 FOXD4L1Q9NU39 408 aa15.67■□□□□ 0.1
RAD50-209ENST00000533482 DIAPH1O60610 1272 aaKnown RBP15.66■□□□□ 0.1
RAD50-209ENST00000533482 CAMSAP2Q08AD1 1489 aa15.66■□□□□ 0.1
RAD50-209ENST00000533482 CALD1Q05682 793 aaKnown RBP15.66■□□□□ 0.1
RAD50-209ENST00000533482 NCOA1Q15788 1441 aa15.66■□□□□ 0.1
RAD50-209ENST00000533482 PTPN23Q9H3S7 1636 aa15.66■□□□□ 0.1
RAD50-209ENST00000533482 NECTIN2Q92692 538 aa15.66■□□□□ 0.1
RAD50-209ENST00000533482 TXNDC2Q86VQ3 553 aa15.65■□□□□ 0.1
RAD50-209ENST00000533482 THOC2Q8NI27 1593 aaKnown RBP15.65■□□□□ 0.1
RAD50-209ENST00000533482 STK31Q9BXU1 1019 aa15.65■□□□□ 0.1
RAD50-209ENST00000533482 KCNJ4P48050 445 aa15.64■□□□□ 0.09
RAD50-209ENST00000533482 SKAP1Q86WV1 359 aa15.64■□□□□ 0.09
RAD50-209ENST00000533482 ZKSCAN2Q63HK3 967 aa15.64■□□□□ 0.09
RAD50-209ENST00000533482 ROCK1Q13464 1354 aa15.63■□□□□ 0.09
RAD50-209ENST00000533482 TCP11L2Q8N4U5 519 aa15.63■□□□□ 0.09
RAD50-209ENST00000533482 BCAR3O75815 825 aa15.62■□□□□ 0.09
RAD50-209ENST00000533482 SLC26A8Q96RN1 970 aa15.61■□□□□ 0.09
RAD50-209ENST00000533482 RUNDC1Q96C34 613 aa15.61■□□□□ 0.09
RAD50-209ENST00000533482 PLCB2Q00722 1185 aa15.6■□□□□ 0.09
RAD50-209ENST00000533482 STAC3Q96MF2 364 aa15.6■□□□□ 0.09
RAD50-209ENST00000533482 ANKRD45Q5TZF3 282 aa15.6■□□□□ 0.09
RAD50-209ENST00000533482 CABP1Q9NZU7 370 aa15.59■□□□□ 0.09
RAD50-209ENST00000533482 NAP1L2Q9ULW6 460 aaPredicted RBP15.59■□□□□ 0.09
RAD50-209ENST00000533482 CCDC141Q6ZP82 1450 aa15.59■□□□□ 0.09
RAD50-209ENST00000533482 NPHP1O15259 732 aa15.58■□□□□ 0.09
RAD50-209ENST00000533482 PTMAP06454 111 aaKnown RBP15.58■□□□□ 0.08
RAD50-209ENST00000533482 FGD1P98174 961 aa15.57■□□□□ 0.08
RAD50-209ENST00000533482 DZIP1LQ8IYY4 767 aaKnown RBP15.57■□□□□ 0.08
RAD50-209ENST00000533482 ERBINQ96RT1 1412 aa15.57■□□□□ 0.08
RAD50-209ENST00000533482 PLEKHH2Q8IVE3 1493 aa15.57■□□□□ 0.08
RAD50-209ENST00000533482 LMOD3Q0VAK6 560 aa15.57■□□□□ 0.08
RAD50-209ENST00000533482 FBXO31Q5XUX0 539 aaPredicted RBP15.57■□□□□ 0.08
RAD50-209ENST00000533482 EIF2S2P20042 333 aaKnown RBP15.56■□□□□ 0.08
RAD50-209ENST00000533482 NAP1L5Q96NT1 182 aaPredicted RBP15.56■□□□□ 0.08
RAD50-209ENST00000533482 ADGRF5Q8IZF2 1346 aa15.56■□□□□ 0.08
RAD50-209ENST00000533482 GPATCH8Q9UKJ3 1502 aaKnown RBP15.55■□□□□ 0.08
RAD50-209ENST00000533482 NOL8Q76FK4 1167 aaKnown RBP15.55■□□□□ 0.08
RAD50-209ENST00000533482 TSR2Q969E8 191 aaKnown RBP15.55■□□□□ 0.08
RAD50-209ENST00000533482 PSME1Q06323 249 aa15.54■□□□□ 0.08
RAD50-209ENST00000533482 NGEFQ8N5V2 710 aa15.54■□□□□ 0.08
RAD50-209ENST00000533482 NLRP6P59044 892 aa15.54■□□□□ 0.08
RAD50-209ENST00000533482 SMG6Q86US8 1419 aaKnown RBP15.54■□□□□ 0.08
RAD50-209ENST00000533482 RPRD2Q5VT52 1461 aaKnown RBP15.54■□□□□ 0.08
RAD50-209ENST00000533482 TRIM6-TRIM34B2RNG4 842 aa15.54■□□□□ 0.08
RAD50-209ENST00000533482 CDK19Q9BWU1 502 aa15.54■□□□□ 0.08
RAD50-209ENST00000533482 LNPKQ9C0E8 428 aa15.54■□□□□ 0.08
RAD50-209ENST00000533482 CHMP3Q9Y3E7 222 aa15.54■□□□□ 0.08
RAD50-209ENST00000533482 C20orf194Q5TEA3 1177 aa15.53■□□□□ 0.08
RAD50-209ENST00000533482 NUP153P49790 1475 aaKnown RBP15.53■□□□□ 0.08
RAD50-209ENST00000533482 MSH5O43196 834 aa15.53■□□□□ 0.08
RAD50-209ENST00000533482 WAPLQ7Z5K2 1190 aa15.53■□□□□ 0.08
RAD50-209ENST00000533482 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.53■□□□□ 0.08
RAD50-209ENST00000533482 ATP10BO94823 1461 aa15.53■□□□□ 0.08
RAD50-209ENST00000533482 CD109Q6YHK3 1445 aa15.53■□□□□ 0.08
RAD50-209ENST00000533482 PRKAR2BP31323 418 aa15.52■□□□□ 0.08
RAD50-209ENST00000533482 CCDC9Q9Y3X0 531 aaKnown RBP15.52■□□□□ 0.08
RAD50-209ENST00000533482 SLC52A1Q9NWF4 448 aa15.52■□□□□ 0.07
RAD50-209ENST00000533482 IDI1Q13907 227 aa15.51■□□□□ 0.07
RAD50-209ENST00000533482 TEFQ10587 303 aa15.5■□□□□ 0.07
RAD50-209ENST00000533482 EXOSC9Q06265 439 aaKnown RBP15.5■□□□□ 0.07
RAD50-209ENST00000533482 FOXD4L5Q5VV16 416 aaPredicted RBP15.5■□□□□ 0.07
RAD50-209ENST00000533482 FOXD4L4Q8WXT5 416 aaPredicted RBP15.5■□□□□ 0.07
RAD50-209ENST00000533482 DDX19BQ9UMR2 479 aa15.5■□□□□ 0.07
RAD50-209ENST00000533482 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.49■□□□□ 0.07
RAD50-209ENST00000533482 DNTTIP2Q5QJE6 756 aaKnown RBP15.49■□□□□ 0.07
RAD50-209ENST00000533482 L1TD1Q5T7N2 865 aaKnown RBP15.48■□□□□ 0.07
RAD50-209ENST00000533482 RBM33Q96EV2 1170 aaKnown RBP15.48■□□□□ 0.07
RAD50-209ENST00000533482 ADGRL1O94910 1474 aa15.48■□□□□ 0.07
RAD50-209ENST00000533482 RRS1Q15050 365 aaKnown RBP15.48■□□□□ 0.07
RAD50-209ENST00000533482 CEBPAP49715 358 aaPredicted RBP15.48■□□□□ 0.07
RAD50-209ENST00000533482 GBP4Q96PP9 640 aa15.48■□□□□ 0.07
RAD50-209ENST00000533482 BACH2Q9BYV9 841 aa15.48■□□□□ 0.07
RAD50-209ENST00000533482 MCCP23508 829 aa15.47■□□□□ 0.07
RAD50-209ENST00000533482 KIF14Q15058 1648 aa15.47■□□□□ 0.07
RAD50-209ENST00000533482 HMMRO75330 724 aa15.47■□□□□ 0.07
RAD50-209ENST00000533482 GSE1Q14687 1217 aa15.47■□□□□ 0.07
RAD50-209ENST00000533482 ZNF428Q96B54 188 aa15.47■□□□□ 0.07
RAD50-209ENST00000533482 USP35Q9P2H5 1018 aa15.46■□□□□ 0.07
RAD50-209ENST00000533482 ABTB2Q8N961 1025 aa15.45■□□□□ 0.06
RAD50-209ENST00000533482 FKBP5Q13451 457 aaPredicted RBP15.45■□□□□ 0.06
RAD50-209ENST00000533482 KIAA1211Q6ZU35 1233 aa15.45■□□□□ 0.06
RAD50-209ENST00000533482 NFKBIBQ15653 356 aa15.45■□□□□ 0.06
RAD50-209ENST00000533482 TSPYL4Q9UJ04 414 aa15.45■□□□□ 0.06
RAD50-209ENST00000533482 C1orf141Q5JVX7 400 aa15.44■□□□□ 0.06
RAD50-209ENST00000533482 UGGT2Q9NYU1 1516 aa15.44■□□□□ 0.06
RAD50-209ENST00000533482 FOXD4L6Q3SYB3 417 aaPredicted RBP15.44■□□□□ 0.06
RAD50-209ENST00000533482 FOXD4L3Q6VB84 417 aaPredicted RBP15.44■□□□□ 0.06
RAD50-209ENST00000533482 ESCO1Q5FWF5 840 aa15.44■□□□□ 0.06
RAD50-209ENST00000533482 RILPL2Q969X0 211 aa15.44■□□□□ 0.06
RAD50-209ENST00000533482 SULT6B1Q6IMI4 303 aa15.43■□□□□ 0.06
RAD50-209ENST00000533482 PDZRN3Q9UPQ7 1066 aa15.43■□□□□ 0.06
RAD50-209ENST00000533482 THUMPD2Q9BTF0 503 aaKnown RBP15.43■□□□□ 0.06
RAD50-209ENST00000533482 C1orf115Q9H7X2 142 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms