RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 FAM135AQ9P2D6 1515 aa8.72□□□□□ -1.01
HMGB1P42-201ENST00000532126 NPM2Q86SE8 214 aaKnown RBP8.72□□□□□ -1.01
HMGB1P42-201ENST00000532126 MROH2AA6NES4 1674 aa8.72□□□□□ -1.01
HMGB1P42-201ENST00000532126 C3P01024 1663 aa8.72□□□□□ -1.01
HMGB1P42-201ENST00000532126 NPATQ14207 1427 aa8.71□□□□□ -1.01
HMGB1P42-201ENST00000532126 UHRF1BP1Q6BDS2 1440 aa8.71□□□□□ -1.01
HMGB1P42-201ENST00000532126 ANKRD50Q9ULJ7 1429 aa8.71□□□□□ -1.01
HMGB1P42-201ENST00000532126 HSPA2P54652 639 aa8.71□□□□□ -1.02
HMGB1P42-201ENST00000532126 RNF17Q9BXT8 1623 aaKnown RBP8.71□□□□□ -1.02
HMGB1P42-201ENST00000532126 KANK1Q14678 1352 aa8.71□□□□□ -1.02
HMGB1P42-201ENST00000532126 FBXO31Q5XUX0 539 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P42-201ENST00000532126 ABCC3O15438 1527 aa8.7□□□□□ -1.02
HMGB1P42-201ENST00000532126 GSE1Q14687 1217 aa8.69□□□□□ -1.02
HMGB1P42-201ENST00000532126 PZPP20742 1482 aa8.69□□□□□ -1.02
HMGB1P42-201ENST00000532126 MROH1Q8NDA8 1641 aa8.69□□□□□ -1.02
HMGB1P42-201ENST00000532126 TNRQ92752 1358 aa8.68□□□□□ -1.02
HMGB1P42-201ENST00000532126 PRDM15P57071 1507 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P42-201ENST00000532126 PREX1Q8TCU6 1659 aa8.68□□□□□ -1.02
HMGB1P42-201ENST00000532126 ZC3H13Q5T200 1668 aaKnown RBP8.67□□□□□ -1.02
HMGB1P42-201ENST00000532126 DEPDC5O75140 1603 aa8.66□□□□□ -1.02
HMGB1P42-201ENST00000532126 ARHGAP31Q2M1Z3 1444 aa8.65□□□□□ -1.02
HMGB1P42-201ENST00000532126 LMTK2Q8IWU2 1503 aa8.64□□□□□ -1.03
HMGB1P42-201ENST00000532126 NUP155O75694 1391 aa8.64□□□□□ -1.03
HMGB1P42-201ENST00000532126 BRPF1P55201 1214 aaPredicted RBP8.64□□□□□ -1.03
HMGB1P42-201ENST00000532126 RNF25Q96BH1 459 aaPredicted RBP8.64□□□□□ -1.03
HMGB1P42-201ENST00000532126 CAMSAP1Q5T5Y3 1602 aa8.64□□□□□ -1.03
HMGB1P42-201ENST00000532126 MYO3AQ8NEV4 1616 aa8.64□□□□□ -1.03
HMGB1P42-201ENST00000532126 VWDEQ8N2E2 1590 aa8.64□□□□□ -1.03
HMGB1P42-201ENST00000532126 A2ML1A8K2U0 1454 aa8.64□□□□□ -1.03
HMGB1P42-201ENST00000532126 ERVK-7P63135 1459 aa8.64□□□□□ -1.03
HMGB1P42-201ENST00000532126 NLRP1Q9C000 1473 aa8.64□□□□□ -1.03
HMGB1P42-201ENST00000532126 HFM1A2PYH4 1435 aa8.63□□□□□ -1.03
HMGB1P42-201ENST00000532126 NAIPQ13075 1403 aa8.63□□□□□ -1.03
HMGB1P42-201ENST00000532126 SETD1BQ9UPS6 1966 aaKnown RBP8.63□□□□□ -1.03
HMGB1P42-201ENST00000532126 CEP170BQ9Y4F5 1589 aaPredicted RBP8.63□□□□□ -1.03
HMGB1P42-201ENST00000532126 CEP152O94986 1710 aa8.63□□□□□ -1.03
HMGB1P42-201ENST00000532126 UNC13BO14795 1591 aa8.62□□□□□ -1.03
HMGB1P42-201ENST00000532126 SPATA31D1Q6ZQQ2 1576 aa8.62□□□□□ -1.03
HMGB1P42-201ENST00000532126 RIOK3O14730 519 aaKnown RBP8.62□□□□□ -1.03
HMGB1P42-201ENST00000532126 DCAF8Q5TAQ9 597 aa8.62□□□□□ -1.03
HMGB1P42-201ENST00000532126 THEMISQ8N1K5 641 aaPredicted RBP8.62□□□□□ -1.03
HMGB1P42-201ENST00000532126 EFCAB6Q5THR3 1501 aa8.61□□□□□ -1.03
HMGB1P42-201ENST00000532126 NCKAP5LQ9HCH0 1330 aa8.6□□□□□ -1.03
HMGB1P42-201ENST00000532126 ZNF142P52746 1687 aaPredicted RBP8.6□□□□□ -1.03
HMGB1P42-201ENST00000532126 PLA2R1Q13018 1463 aa8.6□□□□□ -1.03
HMGB1P42-201ENST00000532126 RPRD2Q5VT52 1461 aaKnown RBP8.6□□□□□ -1.03
HMGB1P42-201ENST00000532126 TRIM26Q12899 539 aaPredicted RBP8.6□□□□□ -1.03
HMGB1P42-201ENST00000532126 NKX1-1Q15270 411 aaPredicted RBP8.6□□□□□ -1.03
HMGB1P42-201ENST00000532126 LMOD2Q6P5Q4 547 aa8.6□□□□□ -1.03
HMGB1P42-201ENST00000532126 TRIM52Q96A61 297 aa8.6□□□□□ -1.03
HMGB1P42-201ENST00000532126 UGGT1Q9NYU2 1555 aa8.6□□□□□ -1.03
HMGB1P42-201ENST00000532126 NUBP1P53384 320 aa8.59□□□□□ -1.03
HMGB1P42-201ENST00000532126 IDI1Q13907 227 aa8.59□□□□□ -1.03
HMGB1P42-201ENST00000532126 SLC52A1Q9NWF4 448 aa8.59□□□□□ -1.03
HMGB1P42-201ENST00000532126 PTPRTO14522 1441 aa8.58□□□□□ -1.04
HMGB1P42-201ENST00000532126 NOS1P29475 1434 aa8.58□□□□□ -1.04
HMGB1P42-201ENST00000532126 GTPBP6O43824 516 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P42-201ENST00000532126 ANKLE2Q86XL3 938 aa8.58□□□□□ -1.04
HMGB1P42-201ENST00000532126 RYDENQ9NUL5 291 aaKnown RBP8.58□□□□□ -1.04
HMGB1P42-201ENST00000532126 TET3O43151 1660 aa8.58□□□□□ -1.04
HMGB1P42-201ENST00000532126 GCC2Q8IWJ2 1684 aa8.58□□□□□ -1.04
HMGB1P42-201ENST00000532126 IQGAP3Q86VI3 1631 aa8.58□□□□□ -1.04
HMGB1P42-201ENST00000532126 STK25O00506 426 aa8.57□□□□□ -1.04
HMGB1P42-201ENST00000532126 NEUROD2Q15784 382 aa8.57□□□□□ -1.04
HMGB1P42-201ENST00000532126 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.57□□□□□ -1.04
HMGB1P42-201ENST00000532126 STRCQ7RTU9 1775 aa8.57□□□□□ -1.04
HMGB1P42-201ENST00000532126 ACIN1Q9UKV3 1341 aaKnown RBP8.55□□□□□ -1.04
HMGB1P42-201ENST00000532126 SETD5Q9C0A6 1442 aa8.55□□□□□ -1.04
HMGB1P42-201ENST00000532126 VGFO15240 615 aaPredicted RBP8.55□□□□□ -1.04
HMGB1P42-201ENST00000532126 TXNDC2Q86VQ3 553 aa8.55□□□□□ -1.04
HMGB1P42-201ENST00000532126 EID1Q9Y6B2 187 aa8.55□□□□□ -1.04
HMGB1P42-201ENST00000532126 SYNMO15061 1565 aa8.55□□□□□ -1.04
HMGB1P42-201ENST00000532126 E9PCH4 1651 aa8.54□□□□□ -1.04
HMGB1P42-201ENST00000532126 TMEM2Q9UHN6 1383 aa8.54□□□□□ -1.04
HMGB1P42-201ENST00000532126 FAM212AQ96EL1 285 aa8.54□□□□□ -1.04
HMGB1P42-201ENST00000532126 PIK3C2BO00750 1634 aa8.54□□□□□ -1.04
HMGB1P42-201ENST00000532126 CFAP65Q6ZU64 1925 aaKnown RBP8.53□□□□□ -1.04
HMGB1P42-201ENST00000532126 RAB3GAP2Q9H2M9 1393 aa8.53□□□□□ -1.04
HMGB1P42-201ENST00000532126 UBR1Q8IWV7 1749 aa8.53□□□□□ -1.04
HMGB1P42-201ENST00000532126 NPHP4O75161 1426 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P42-201ENST00000532126 SCAF11Q99590 1463 aaKnown RBP8.52□□□□□ -1.05
HMGB1P42-201ENST00000532126 ARHGAP23Q9P227 1491 aa8.52□□□□□ -1.05
HMGB1P42-201ENST00000532126 LTKP29376 864 aa8.52□□□□□ -1.05
HMGB1P42-201ENST00000532126 HDGFP51858 240 aaKnown RBP8.52□□□□□ -1.05
HMGB1P42-201ENST00000532126 MPHOSPH9Q99550 1183 aa8.52□□□□□ -1.05
HMGB1P42-201ENST00000532126 RSPH6AQ9H0K4 717 aa8.52□□□□□ -1.05
HMGB1P42-201ENST00000532126 ADGRB3O60242 1522 aa8.52□□□□□ -1.05
HMGB1P42-201ENST00000532126 SLIT1O75093 1534 aa8.52□□□□□ -1.05
HMGB1P42-201ENST00000532126 NEURL4Q96JN8 1562 aa8.52□□□□□ -1.05
HMGB1P42-201ENST00000532126 ZNF335Q9H4Z2 1342 aaPredicted RBP8.52□□□□□ -1.05
HMGB1P42-201ENST00000532126 MED14O60244 1454 aa8.51□□□□□ -1.05
HMGB1P42-201ENST00000532126 PPP1R15AO75807 674 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P42-201ENST00000532126 CERKQ8TCT0 537 aa8.51□□□□□ -1.05
HMGB1P42-201ENST00000532126 KDM5AP29375 1690 aaKnown RBP8.5□□□□□ -1.05
HMGB1P42-201ENST00000532126 POLR1AO95602 1720 aaPredicted RBP8.5□□□□□ -1.05
HMGB1P42-201ENST00000532126 SPDYE1Q8NFV5 336 aaPredicted RBP8.5□□□□□ -1.05
HMGB1P42-201ENST00000532126 ZMYND15Q9H091 742 aa8.5□□□□□ -1.05
HMGB1P42-201ENST00000532126 RIMS2Q9UQ26 1411 aa8.49□□□□□ -1.05
HMGB1P42-201ENST00000532126 CHRM1P11229 460 aaPredicted RBP8.49□□□□□ -1.05
HMGB1P42-201ENST00000532126 HRCP23327 699 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms