RNA–Protein interactions for RNA: ENST00000529919.5

CTNND1-222, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 4,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-222ENST00000529919 CCDC146Q8IYE0 955 aa9.85□□□□□ -0.83
CTNND1-222ENST00000529919 FAM13BQ9NYF5 915 aa9.85□□□□□ -0.83
CTNND1-222ENST00000529919 ZNF608Q9ULD9 1512 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-222ENST00000529919 FOXD4L6Q3SYB3 417 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-222ENST00000529919 FOXD4L3Q6VB84 417 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-222ENST00000529919 DHX57Q6P158 1386 aaKnown RBP9.85□□□□□ -0.83
CTNND1-222ENST00000529919 CREBRFQ8IUR6 639 aa9.84□□□□□ -0.83
CTNND1-222ENST00000529919 STK31Q9BXU1 1019 aa9.84□□□□□ -0.83
CTNND1-222ENST00000529919 MAGI1Q96QZ7 1491 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-222ENST00000529919 CASKIN1Q8WXD9 1431 aa9.84□□□□□ -0.83
CTNND1-222ENST00000529919 PLIN1O60240 522 aa9.84□□□□□ -0.83
CTNND1-222ENST00000529919 C1orf141Q5JVX7 400 aa9.84□□□□□ -0.83
CTNND1-222ENST00000529919 NUTM2GQ5VZR2 741 aa9.84□□□□□ -0.83
CTNND1-222ENST00000529919 KLHL34Q8N239 644 aa9.84□□□□□ -0.83
CTNND1-222ENST00000529919 SYNJ1O43426 1573 aa9.84□□□□□ -0.84
CTNND1-222ENST00000529919 G3V3G9 751 aa9.83□□□□□ -0.84
CTNND1-222ENST00000529919 TPM3P06753 285 aa9.83□□□□□ -0.84
CTNND1-222ENST00000529919 DCAF8Q5TAQ9 597 aa9.83□□□□□ -0.84
CTNND1-222ENST00000529919 SLC4A10Q6U841 1118 aa9.83□□□□□ -0.84
CTNND1-222ENST00000529919 CENPQQ7L2Z9 268 aaPredicted RBP9.83□□□□□ -0.84
CTNND1-222ENST00000529919 EXOC6Q8TAG9 804 aa9.83□□□□□ -0.84
CTNND1-222ENST00000529919 SLC52A1Q9NWF4 448 aa9.83□□□□□ -0.84
CTNND1-222ENST00000529919 PDE4CQ08493 712 aa9.83□□□□□ -0.84
CTNND1-222ENST00000529919 SF3A1Q15459 793 aaKnown RBP9.83□□□□□ -0.84
CTNND1-222ENST00000529919 CCAR2Q8N163 923 aaKnown RBP9.83□□□□□ -0.84
CTNND1-222ENST00000529919 KIF16BQ96L93 1317 aa9.83□□□□□ -0.84
CTNND1-222ENST00000529919 TROQ12816 1431 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-222ENST00000529919 FGD6Q6ZV73 1430 aa9.82□□□□□ -0.84
CTNND1-222ENST00000529919 NLRP6P59044 892 aa9.82□□□□□ -0.84
CTNND1-222ENST00000529919 SKOR2Q2VWA4 1001 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-222ENST00000529919 NLRP2Q9NX02 1062 aa9.82□□□□□ -0.84
CTNND1-222ENST00000529919 CEBPAP49715 358 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-222ENST00000529919 ABCA10Q8WWZ4 1543 aa9.82□□□□□ -0.84
CTNND1-222ENST00000529919 SF3B2Q13435 895 aaKnown RBP9.82□□□□□ -0.84
CTNND1-222ENST00000529919 ZNF771Q7L3S4 317 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-222ENST00000529919 BCL2L13Q9BXK5 485 aa9.82□□□□□ -0.84
CTNND1-222ENST00000529919 TEFQ10587 303 aa9.81□□□□□ -0.84
CTNND1-222ENST00000529919 GORABQ5T7V8 394 aa9.81□□□□□ -0.84
CTNND1-222ENST00000529919 GRIN2AQ12879 1464 aa9.81□□□□□ -0.84
CTNND1-222ENST00000529919 DCAF8L1A6NGE4 600 aa9.81□□□□□ -0.84
CTNND1-222ENST00000529919 BECN2A8MW95 431 aa9.81□□□□□ -0.84
CTNND1-222ENST00000529919 RASSF8Q8NHQ8 419 aa9.81□□□□□ -0.84
CTNND1-222ENST00000529919 GPRASP1Q5JY77 1395 aa9.81□□□□□ -0.84
CTNND1-222ENST00000529919 URB2Q14146 1524 aaKnown RBP9.81□□□□□ -0.84
CTNND1-222ENST00000529919 CHMP3Q9Y3E7 222 aa9.81□□□□□ -0.84
CTNND1-222ENST00000529919 GOLGA6L19H0YKK7 550 aa9.8□□□□□ -0.84
CTNND1-222ENST00000529919 CGNL1Q0VF96 1302 aa9.8□□□□□ -0.84
CTNND1-222ENST00000529919 NCOA2Q15596 1464 aa9.8□□□□□ -0.84
CTNND1-222ENST00000529919 TAF7LQ5H9L4 462 aa9.8□□□□□ -0.84
CTNND1-222ENST00000529919 PLEKHH2Q8IVE3 1493 aa9.8□□□□□ -0.84
CTNND1-222ENST00000529919 RAPGEF4Q8WZA2 1011 aa9.8□□□□□ -0.84
CTNND1-222ENST00000529919 DMRT2Q9Y5R5 561 aa9.8□□□□□ -0.84
CTNND1-222ENST00000529919 STAC3Q96MF2 364 aa9.8□□□□□ -0.84
CTNND1-222ENST00000529919 GPATCH3Q96I76 525 aa9.8□□□□□ -0.84
CTNND1-222ENST00000529919 KIF3AQ9Y496 699 aa9.8□□□□□ -0.84
CTNND1-222ENST00000529919 FAM43AQ8N2R8 423 aa9.79□□□□□ -0.84
CTNND1-222ENST00000529919 ZNF592Q92610 1267 aa9.79□□□□□ -0.84
CTNND1-222ENST00000529919 RRP1P56182 461 aaKnown RBP9.79□□□□□ -0.84
CTNND1-222ENST00000529919 TTC5Q8N0Z6 440 aa9.79□□□□□ -0.84
CTNND1-222ENST00000529919 STRN4Q9NRL3 753 aa9.79□□□□□ -0.84
CTNND1-222ENST00000529919 ATP6V1DQ9Y5K8 247 aa9.79□□□□□ -0.84
CTNND1-222ENST00000529919 PHLDB1Q86UU1 1377 aa9.79□□□□□ -0.84
CTNND1-222ENST00000529919 FYCO1Q9BQS8 1478 aa9.78□□□□□ -0.84
CTNND1-222ENST00000529919 LMOD3Q0VAK6 560 aa9.78□□□□□ -0.84
CTNND1-222ENST00000529919 ANKRD45Q5TZF3 282 aa9.78□□□□□ -0.84
CTNND1-222ENST00000529919 ABTB2Q8N961 1025 aa9.78□□□□□ -0.84
CTNND1-222ENST00000529919 PRKRIP1Q9H875 184 aaPredicted RBP9.78□□□□□ -0.84
CTNND1-222ENST00000529919 PANK3Q9H999 370 aa9.78□□□□□ -0.84
CTNND1-222ENST00000529919 RRP7AQ9Y3A4 280 aaKnown RBP9.78□□□□□ -0.84
CTNND1-222ENST00000529919 CFAP70Q5T0N1 1121 aa9.78□□□□□ -0.84
CTNND1-222ENST00000529919 CRBNQ96SW2 442 aa9.78□□□□□ -0.84
CTNND1-222ENST00000529919 HDAC5Q9UQL6 1122 aa9.78□□□□□ -0.84
CTNND1-222ENST00000529919 COG6Q9Y2V7 657 aa9.78□□□□□ -0.84
CTNND1-222ENST00000529919 TOP2BQ02880 1626 aa9.78□□□□□ -0.84
CTNND1-222ENST00000529919 PES1O00541 588 aaKnown RBP9.78□□□□□ -0.84
CTNND1-222ENST00000529919 ELL2O00472 640 aaPredicted RBP9.78□□□□□ -0.84
CTNND1-222ENST00000529919 CHMP5Q9NZZ3 219 aa9.77□□□□□ -0.85
CTNND1-222ENST00000529919 ZBED9Q6R2W3 1325 aa9.77□□□□□ -0.85
CTNND1-222ENST00000529919 GPS2Q13227 327 aa9.76□□□□□ -0.85
CTNND1-222ENST00000529919 RILPL2Q969X0 211 aa9.76□□□□□ -0.85
CTNND1-222ENST00000529919 CABP2Q9NPB3 220 aa9.76□□□□□ -0.85
CTNND1-222ENST00000529919 SETQ01105 290 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-222ENST00000529919 PLB1Q6P1J6 1458 aa9.76□□□□□ -0.85
CTNND1-222ENST00000529919 LRRC9Q6ZRR7 1453 aa9.76□□□□□ -0.85
CTNND1-222ENST00000529919 H3BQV1 296 aa9.76□□□□□ -0.85
CTNND1-222ENST00000529919 IFFO2Q5TF58 517 aa9.76□□□□□ -0.85
CTNND1-222ENST00000529919 TOMM22Q9NS69 142 aa9.76□□□□□ -0.85
CTNND1-222ENST00000529919 PRXQ9BXM0 1461 aa9.76□□□□□ -0.85
CTNND1-222ENST00000529919 C9orf84Q5VXU9 1444 aa9.75□□□□□ -0.85
CTNND1-222ENST00000529919 PRAM1Q96QH2 718 aa9.75□□□□□ -0.85
CTNND1-222ENST00000529919 FRAT2O75474 233 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-222ENST00000529919 NFKBIBQ15653 356 aa9.75□□□□□ -0.85
CTNND1-222ENST00000529919 CEP89Q96ST8 783 aa9.75□□□□□ -0.85
CTNND1-222ENST00000529919 NGEFQ8N5V2 710 aa9.75□□□□□ -0.85
CTNND1-222ENST00000529919 FAM184AQ8NB25 1140 aa9.75□□□□□ -0.85
CTNND1-222ENST00000529919 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-222ENST00000529919 MYBBP1AQ9BQG0 1328 aaKnown RBP9.75□□□□□ -0.85
CTNND1-222ENST00000529919 TSR1Q2NL82 804 aaKnown RBP9.74□□□□□ -0.85
CTNND1-222ENST00000529919 PRDM11Q9NQV5 511 aa9.74□□□□□ -0.85
CTNND1-222ENST00000529919 ZKSCAN2Q63HK3 967 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms