RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 NUP155O75694 1391 aa9.34□□□□□ -0.91
ATPAF1-209ENST00000529214 PRDM15P57071 1507 aaPredicted RBP9.34□□□□□ -0.91
ATPAF1-209ENST00000529214 SETD1BQ9UPS6 1966 aaKnown RBP9.34□□□□□ -0.91
ATPAF1-209ENST00000529214 VASPP50552 380 aaPredicted RBP9.34□□□□□ -0.91
ATPAF1-209ENST00000529214 ARHGAP31Q2M1Z3 1444 aa9.34□□□□□ -0.92
ATPAF1-209ENST00000529214 PZPP20742 1482 aa9.33□□□□□ -0.92
ATPAF1-209ENST00000529214 VWDEQ8N2E2 1590 aa9.33□□□□□ -0.92
ATPAF1-209ENST00000529214 LMTK2Q8IWU2 1503 aa9.32□□□□□ -0.92
ATPAF1-209ENST00000529214 UHRF1BP1Q6BDS2 1440 aa9.31□□□□□ -0.92
ATPAF1-209ENST00000529214 ZC3H13Q5T200 1668 aaKnown RBP9.31□□□□□ -0.92
ATPAF1-209ENST00000529214 LMTK3Q96Q04 1460 aa9.31□□□□□ -0.92
ATPAF1-209ENST00000529214 HSPA2P54652 639 aa9.31□□□□□ -0.92
ATPAF1-209ENST00000529214 TRIM52Q96A61 297 aa9.31□□□□□ -0.92
ATPAF1-209ENST00000529214 TNRQ92752 1358 aa9.31□□□□□ -0.92
ATPAF1-209ENST00000529214 SETD5Q9C0A6 1442 aa9.3□□□□□ -0.92
ATPAF1-209ENST00000529214 ACIN1Q9UKV3 1341 aaKnown RBP9.3□□□□□ -0.92
ATPAF1-209ENST00000529214 UNC13BO14795 1591 aa9.29□□□□□ -0.92
ATPAF1-209ENST00000529214 HRCP23327 699 aa9.29□□□□□ -0.92
ATPAF1-209ENST00000529214 CEP152O94986 1710 aa9.29□□□□□ -0.92
ATPAF1-209ENST00000529214 CAMSAP1Q5T5Y3 1602 aa9.28□□□□□ -0.92
ATPAF1-209ENST00000529214 IDI1Q13907 227 aa9.28□□□□□ -0.92
ATPAF1-209ENST00000529214 LHX8Q68G74 356 aa9.28□□□□□ -0.92
ATPAF1-209ENST00000529214 ERVK-7P63135 1459 aa9.28□□□□□ -0.92
ATPAF1-209ENST00000529214 SPATA31D1Q6ZQQ2 1576 aa9.28□□□□□ -0.92
ATPAF1-209ENST00000529214 GCC2Q8IWJ2 1684 aa9.28□□□□□ -0.92
ATPAF1-209ENST00000529214 TRIM26Q12899 539 aaPredicted RBP9.28□□□□□ -0.92
ATPAF1-209ENST00000529214 SLC52A1Q9NWF4 448 aa9.28□□□□□ -0.92
ATPAF1-209ENST00000529214 NOS1P29475 1434 aa9.27□□□□□ -0.92
ATPAF1-209ENST00000529214 RPRD2Q5VT52 1461 aaKnown RBP9.27□□□□□ -0.93
ATPAF1-209ENST00000529214 PREX1Q8TCU6 1659 aa9.27□□□□□ -0.93
ATPAF1-209ENST00000529214 IFNLR1Q8IU57 520 aaPredicted RBP9.27□□□□□ -0.93
ATPAF1-209ENST00000529214 THEMISQ8N1K5 641 aaPredicted RBP9.27□□□□□ -0.93
ATPAF1-209ENST00000529214 PODXL2Q9NZ53 605 aa9.27□□□□□ -0.93
ATPAF1-209ENST00000529214 RAB3GAP2Q9H2M9 1393 aa9.27□□□□□ -0.93
ATPAF1-209ENST00000529214 NLRP1Q9C000 1473 aa9.27□□□□□ -0.93
ATPAF1-209ENST00000529214 EFCAB6Q5THR3 1501 aa9.27□□□□□ -0.93
ATPAF1-209ENST00000529214 IQGAP3Q86VI3 1631 aa9.26□□□□□ -0.93
ATPAF1-209ENST00000529214 A2ML1A8K2U0 1454 aa9.26□□□□□ -0.93
ATPAF1-209ENST00000529214 MPHOSPH9Q99550 1183 aa9.26□□□□□ -0.93
ATPAF1-209ENST00000529214 TSHZ2Q9NRE2 1034 aa9.26□□□□□ -0.93
ATPAF1-209ENST00000529214 CFAP65Q6ZU64 1925 aaKnown RBP9.25□□□□□ -0.93
ATPAF1-209ENST00000529214 TET3O43151 1660 aa9.25□□□□□ -0.93
ATPAF1-209ENST00000529214 BCL11AQ9H165 835 aa9.25□□□□□ -0.93
ATPAF1-209ENST00000529214 CEP170BQ9Y4F5 1589 aaPredicted RBP9.24□□□□□ -0.93
ATPAF1-209ENST00000529214 STAG3Q9UJ98 1225 aa9.23□□□□□ -0.93
ATPAF1-209ENST00000529214 MYO3AQ8NEV4 1616 aa9.23□□□□□ -0.93
ATPAF1-209ENST00000529214 PTPRTO14522 1441 aa9.23□□□□□ -0.93
ATPAF1-209ENST00000529214 E9PCH4 1651 aa9.22□□□□□ -0.93
ATPAF1-209ENST00000529214 NCKAP5LQ9HCH0 1330 aa9.22□□□□□ -0.93
ATPAF1-209ENST00000529214 ANKLE2Q86XL3 938 aa9.22□□□□□ -0.93
ATPAF1-209ENST00000529214 SPRYD3Q8NCJ5 442 aa9.22□□□□□ -0.93
ATPAF1-209ENST00000529214 UGGT1Q9NYU2 1555 aa9.22□□□□□ -0.93
ATPAF1-209ENST00000529214 PLA2R1Q13018 1463 aa9.21□□□□□ -0.93
ATPAF1-209ENST00000529214 SYNMO15061 1565 aa9.21□□□□□ -0.94
ATPAF1-209ENST00000529214 ZNF142P52746 1687 aaPredicted RBP9.21□□□□□ -0.94
ATPAF1-209ENST00000529214 TXNDC2Q86VQ3 553 aa9.2□□□□□ -0.94
ATPAF1-209ENST00000529214 ATF5Q9Y2D1 282 aaPredicted RBP9.2□□□□□ -0.94
ATPAF1-209ENST00000529214 CHGAP10645 457 aaKnown RBP9.19□□□□□ -0.94
ATPAF1-209ENST00000529214 LTKP29376 864 aa9.19□□□□□ -0.94
ATPAF1-209ENST00000529214 HDGFP51858 240 aaKnown RBP9.19□□□□□ -0.94
ATPAF1-209ENST00000529214 EID1Q9Y6B2 187 aa9.19□□□□□ -0.94
ATPAF1-209ENST00000529214 TMEM2Q9UHN6 1383 aa9.19□□□□□ -0.94
ATPAF1-209ENST00000529214 STRCQ7RTU9 1775 aa9.18□□□□□ -0.94
ATPAF1-209ENST00000529214 C19orf67A6NJJ6 358 aa9.18□□□□□ -0.94
ATPAF1-209ENST00000529214 PRKAR2AP13861 404 aaKnown RBP9.18□□□□□ -0.94
ATPAF1-209ENST00000529214 PIK3C2BO00750 1634 aa9.18□□□□□ -0.94
ATPAF1-209ENST00000529214 GABBR2O75899 941 aa9.17□□□□□ -0.94
ATPAF1-209ENST00000529214 UBR1Q8IWV7 1749 aa9.17□□□□□ -0.94
ATPAF1-209ENST00000529214 ARHGAP23Q9P227 1491 aa9.17□□□□□ -0.94
ATPAF1-209ENST00000529214 SLIT1O75093 1534 aa9.16□□□□□ -0.94
ATPAF1-209ENST00000529214 KDM5AP29375 1690 aaKnown RBP9.16□□□□□ -0.94
ATPAF1-209ENST00000529214 TRPM2O94759 1503 aa9.16□□□□□ -0.94
ATPAF1-209ENST00000529214 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.15□□□□□ -0.94
ATPAF1-209ENST00000529214 PLSCR2Q9NRY7 297 aa9.15□□□□□ -0.94
ATPAF1-209ENST00000529214 MED14O60244 1454 aa9.15□□□□□ -0.94
ATPAF1-209ENST00000529214 TMEM131LA2VDJ0 1609 aa9.15□□□□□ -0.94
ATPAF1-209ENST00000529214 SPHKAPQ2M3C7 1700 aa9.15□□□□□ -0.94
ATPAF1-209ENST00000529214 ANKRD30BQ9BXX2 1392 aa9.15□□□□□ -0.95
ATPAF1-209ENST00000529214 SPDYE4A6NLX3 237 aa9.15□□□□□ -0.95
ATPAF1-209ENST00000529214 ZNF326Q5BKZ1 582 aaKnown RBP9.15□□□□□ -0.95
ATPAF1-209ENST00000529214 ADGRB3O60242 1522 aa9.14□□□□□ -0.95
ATPAF1-209ENST00000529214 NPHP4O75161 1426 aaPredicted RBP9.14□□□□□ -0.95
ATPAF1-209ENST00000529214 SCAF11Q99590 1463 aaKnown RBP9.14□□□□□ -0.95
ATPAF1-209ENST00000529214 NUTM2DQ5VT03 806 aaPredicted RBP9.14□□□□□ -0.95
ATPAF1-209ENST00000529214 PCGF6Q9BYE7 350 aa9.14□□□□□ -0.95
ATPAF1-209ENST00000529214 CCDC144AA2RUR9 1427 aa9.13□□□□□ -0.95
ATPAF1-209ENST00000529214 ZFYVE9O95405 1425 aa9.13□□□□□ -0.95
ATPAF1-209ENST00000529214 RIMS2Q9UQ26 1411 aa9.13□□□□□ -0.95
ATPAF1-209ENST00000529214 ECM2O94769 699 aaPredicted RBP9.13□□□□□ -0.95
ATPAF1-209ENST00000529214 PROM2Q8N271 834 aa9.13□□□□□ -0.95
ATPAF1-209ENST00000529214 NEURL4Q96JN8 1562 aa9.12□□□□□ -0.95
ATPAF1-209ENST00000529214 RPGRIP1LQ68CZ1 1315 aa9.12□□□□□ -0.95
ATPAF1-209ENST00000529214 CLTCL1P53675 1640 aa9.12□□□□□ -0.95
ATPAF1-209ENST00000529214 PPP1R15AO75807 674 aaPredicted RBP9.12□□□□□ -0.95
ATPAF1-209ENST00000529214 RGL3Q3MIN7 710 aa9.12□□□□□ -0.95
ATPAF1-209ENST00000529214 VGFO15240 615 aaPredicted RBP9.11□□□□□ -0.95
ATPAF1-209ENST00000529214 SLC26A8Q96RN1 970 aa9.11□□□□□ -0.95
ATPAF1-209ENST00000529214 PLEKHG1Q9ULL1 1385 aa9.11□□□□□ -0.95
ATPAF1-209ENST00000529214 SPATA31E1Q6ZUB1 1445 aa9.1□□□□□ -0.95
ATPAF1-209ENST00000529214 SPDYE2BA6NHP3 402 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms