RNA–Protein interactions for RNA: ENST00000528246.5

MSRA-210, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-210ENST00000528246 KIAA1210Q9ULL0 1709 aa13.62□□□□□ -0.23
MSRA-210ENST00000528246 PLCH2O75038 1416 aa13.62□□□□□ -0.23
MSRA-210ENST00000528246 PTPRMP28827 1452 aa13.62□□□□□ -0.23
MSRA-210ENST00000528246 SENP3Q9H4L4 574 aaPredicted RBP13.61□□□□□ -0.23
MSRA-210ENST00000528246 TRPM2O94759 1503 aa13.61□□□□□ -0.23
MSRA-210ENST00000528246 CDCA8Q53HL2 280 aa13.61□□□□□ -0.23
MSRA-210ENST00000528246 MADDQ8WXG6 1647 aa13.61□□□□□ -0.23
MSRA-210ENST00000528246 ABCC1P33527 1531 aa13.6□□□□□ -0.23
MSRA-210ENST00000528246 ZBTB47Q9UFB7 747 aaPredicted RBP13.6□□□□□ -0.23
MSRA-210ENST00000528246 DISP3Q9P2K9 1392 aa13.6□□□□□ -0.23
MSRA-210ENST00000528246 NEO1Q92859 1461 aa13.6□□□□□ -0.23
MSRA-210ENST00000528246 DEPDC5O75140 1603 aa13.59□□□□□ -0.23
MSRA-210ENST00000528246 USP35Q9P2H5 1018 aa13.59□□□□□ -0.23
MSRA-210ENST00000528246 SPHKAPQ2M3C7 1700 aa13.59□□□□□ -0.23
MSRA-210ENST00000528246 PTPRTO14522 1441 aa13.59□□□□□ -0.23
MSRA-210ENST00000528246 CEP152O94986 1710 aa13.59□□□□□ -0.23
MSRA-210ENST00000528246 PIK3C2GO75747 1445 aa13.58□□□□□ -0.23
MSRA-210ENST00000528246 NGEFQ8N5V2 710 aa13.58□□□□□ -0.24
MSRA-210ENST00000528246 SCAF11Q99590 1463 aaKnown RBP13.56□□□□□ -0.24
MSRA-210ENST00000528246 NBPF1Q3BBV0 1214 aa13.56□□□□□ -0.24
MSRA-210ENST00000528246 EXOC6Q8TAG9 804 aa13.56□□□□□ -0.24
MSRA-210ENST00000528246 BACH2Q9BYV9 841 aa13.56□□□□□ -0.24
MSRA-210ENST00000528246 DEKP35659 375 aaKnown RBP13.56□□□□□ -0.24
MSRA-210ENST00000528246 FANCAO15360 1455 aa13.55□□□□□ -0.24
MSRA-210ENST00000528246 PANK3Q9H999 370 aa13.55□□□□□ -0.24
MSRA-210ENST00000528246 VWDEQ8N2E2 1590 aa13.55□□□□□ -0.24
MSRA-210ENST00000528246 TET3O43151 1660 aa13.54□□□□□ -0.24
MSRA-210ENST00000528246 PAK3O75914 559 aaPredicted RBP13.54□□□□□ -0.24
MSRA-210ENST00000528246 ASXL1Q8IXJ9 1541 aa13.54□□□□□ -0.24
MSRA-210ENST00000528246 EIF3AQ14152 1382 aaKnown RBP13.54□□□□□ -0.24
MSRA-210ENST00000528246 FRMPD1Q5SYB0 1578 aa13.53□□□□□ -0.24
MSRA-210ENST00000528246 PDE4AP27815 886 aa13.53□□□□□ -0.24
MSRA-210ENST00000528246 EFCAB2Q5VUJ9 269 aa13.53□□□□□ -0.24
MSRA-210ENST00000528246 ZNF521Q96K83 1311 aa13.53□□□□□ -0.24
MSRA-210ENST00000528246 ILDR2Q71H61 639 aa13.53□□□□□ -0.24
MSRA-210ENST00000528246 RTL5Q5HYW3 569 aaPredicted RBP13.52□□□□□ -0.25
MSRA-210ENST00000528246 DDRGK1Q96HY6 314 aa13.52□□□□□ -0.25
MSRA-210ENST00000528246 ZFYVE16Q7Z3T8 1539 aa13.51□□□□□ -0.25
MSRA-210ENST00000528246 MYOM2P54296 1465 aa13.51□□□□□ -0.25
MSRA-210ENST00000528246 CFAP74Q9C0B2 1584 aa13.51□□□□□ -0.25
MSRA-210ENST00000528246 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.5□□□□□ -0.25
MSRA-210ENST00000528246 PPM1GO15355 546 aaPredicted RBP13.5□□□□□ -0.25
MSRA-210ENST00000528246 RGL3Q3MIN7 710 aa13.5□□□□□ -0.25
MSRA-210ENST00000528246 AMER1Q5JTC6 1135 aaPredicted RBP13.5□□□□□ -0.25
MSRA-210ENST00000528246 RICTORQ6R327 1708 aa13.49□□□□□ -0.25
MSRA-210ENST00000528246 KDM2BQ8NHM5 1336 aa13.49□□□□□ -0.25
MSRA-210ENST00000528246 MYOM1P52179 1685 aa13.49□□□□□ -0.25
MSRA-210ENST00000528246 SOCS7O14512 581 aa13.49□□□□□ -0.25
MSRA-210ENST00000528246 CENPQQ7L2Z9 268 aaPredicted RBP13.49□□□□□ -0.25
MSRA-210ENST00000528246 KNSTRNQ9Y448 316 aa13.49□□□□□ -0.25
MSRA-210ENST00000528246 SBNO2Q9Y2G9 1366 aa13.49□□□□□ -0.25
MSRA-210ENST00000528246 KDM5AP29375 1690 aaKnown RBP13.49□□□□□ -0.25
MSRA-210ENST00000528246 INO80Q9ULG1 1556 aaPredicted RBP13.47□□□□□ -0.25
MSRA-210ENST00000528246 NINLQ9Y2I6 1382 aa13.47□□□□□ -0.25
MSRA-210ENST00000528246 PPP2R1AP30153 589 aa13.47□□□□□ -0.25
MSRA-210ENST00000528246 CNGB1Q14028 1251 aaPredicted RBP13.47□□□□□ -0.25
MSRA-210ENST00000528246 TRMT2AQ8IZ69 625 aaKnown RBP13.47□□□□□ -0.25
MSRA-210ENST00000528246 CDCA7LQ96GN5 454 aa13.47□□□□□ -0.25
MSRA-210ENST00000528246 CLTCL1P53675 1640 aa13.47□□□□□ -0.25
MSRA-210ENST00000528246 MYO3AQ8NEV4 1616 aa13.47□□□□□ -0.25
MSRA-210ENST00000528246 CC2D1BQ5T0F9 858 aaKnown RBP13.47□□□□□ -0.25
MSRA-210ENST00000528246 DUSP27Q5VZP5 1158 aa13.46□□□□□ -0.25
MSRA-210ENST00000528246 ARHGEF40Q8TER5 1519 aa13.46□□□□□ -0.25
MSRA-210ENST00000528246 RIMS1Q86UR5 1692 aaKnown RBP13.46□□□□□ -0.26
MSRA-210ENST00000528246 KANK1Q14678 1352 aa13.45□□□□□ -0.26
MSRA-210ENST00000528246 GOLGA2Q08379 1002 aa13.45□□□□□ -0.26
MSRA-210ENST00000528246 WDR43Q15061 677 aaKnown RBP eCLIP13.45□□□□□ -0.26
MSRA-210ENST00000528246 CERKQ8TCT0 537 aa13.45□□□□□ -0.26
MSRA-210ENST00000528246 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.45□□□□□ -0.26
MSRA-210ENST00000528246 ADAMTS8Q9UP79 889 aa13.45□□□□□ -0.26
MSRA-210ENST00000528246 TRAPPC8Q9Y2L5 1435 aa13.45□□□□□ -0.26
MSRA-210ENST00000528246 NRXN1Q9ULB1 1477 aa13.44□□□□□ -0.26
MSRA-210ENST00000528246 YEATS2Q9ULM3 1422 aa13.44□□□□□ -0.26
MSRA-210ENST00000528246 CRBNQ96SW2 442 aa13.44□□□□□ -0.26
MSRA-210ENST00000528246 SPAG9O60271 1321 aaKnown RBP13.44□□□□□ -0.26
MSRA-210ENST00000528246 LMTK2Q8IWU2 1503 aa13.43□□□□□ -0.26
MSRA-210ENST00000528246 PLEKHH1Q9ULM0 1364 aa13.43□□□□□ -0.26
MSRA-210ENST00000528246 SETBP1Q9Y6X0 1596 aa13.43□□□□□ -0.26
MSRA-210ENST00000528246 POGZQ7Z3K3 1410 aa13.43□□□□□ -0.26
MSRA-210ENST00000528246 HSPA2P54652 639 aa13.43□□□□□ -0.26
MSRA-210ENST00000528246 AAMPQ13685 434 aa13.43□□□□□ -0.26
MSRA-210ENST00000528246 IFT172Q9UG01 1749 aa13.43□□□□□ -0.26
MSRA-210ENST00000528246 ATP7AQ04656 1500 aa13.43□□□□□ -0.26
MSRA-210ENST00000528246 NKTRP30414 1462 aaKnown RBP13.42□□□□□ -0.26
MSRA-210ENST00000528246 SLFN5Q08AF3 891 aa13.42□□□□□ -0.26
MSRA-210ENST00000528246 NCBP3Q53F19 620 aaKnown RBP13.42□□□□□ -0.26
MSRA-210ENST00000528246 NBR1Q14596 966 aa13.42□□□□□ -0.26
MSRA-210ENST00000528246 ZMYM3Q14202 1370 aa13.41□□□□□ -0.26
MSRA-210ENST00000528246 PLPPR3Q6T4P5 718 aa13.4□□□□□ -0.26
MSRA-210ENST00000528246 MLECQ14165 292 aa13.39□□□□□ -0.27
MSRA-210ENST00000528246 POLR3AO14802 1390 aaPredicted RBP13.39□□□□□ -0.27
MSRA-210ENST00000528246 EFCAB6Q5THR3 1501 aa13.39□□□□□ -0.27
MSRA-210ENST00000528246 MROH1Q8NDA8 1641 aa13.39□□□□□ -0.27
MSRA-210ENST00000528246 USP32Q8NFA0 1604 aa13.39□□□□□ -0.27
MSRA-210ENST00000528246 E9PSI1 815 aa13.39□□□□□ -0.27
MSRA-210ENST00000528246 FAM161AQ3B820 660 aa13.39□□□□□ -0.27
MSRA-210ENST00000528246 AFAP1Q8N556 730 aa13.39□□□□□ -0.27
MSRA-210ENST00000528246 ERVK-7P63135 1459 aa13.39□□□□□ -0.27
MSRA-210ENST00000528246 SIGLEC1Q9BZZ2 1709 aa13.38□□□□□ -0.27
MSRA-210ENST00000528246 KIF1BO60333 1816 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 556.5 ms