RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 RTEL1-TNFRSF6BF6WH68 1400 aa15.93■□□□□ 0.14
CHMP1B-201ENST00000526991 RRP1P56182 461 aaKnown RBP15.92■□□□□ 0.14
CHMP1B-201ENST00000526991 NBR1Q14596 966 aa15.92■□□□□ 0.14
CHMP1B-201ENST00000526991 LRPPRCP42704 1394 aaKnown RBP15.91■□□□□ 0.14
CHMP1B-201ENST00000526991 PAK3O75914 559 aaPredicted RBP15.91■□□□□ 0.14
CHMP1B-201ENST00000526991 TNNT2P45379 298 aaPredicted RBP15.91■□□□□ 0.14
CHMP1B-201ENST00000526991 TRPM1Q7Z4N2 1603 aa15.91■□□□□ 0.14
CHMP1B-201ENST00000526991 ZNF518AQ6AHZ1 1483 aa15.9■□□□□ 0.14
CHMP1B-201ENST00000526991 STK26Q9P289 416 aa15.9■□□□□ 0.14
CHMP1B-201ENST00000526991 CLTCL1P53675 1640 aa15.9■□□□□ 0.14
CHMP1B-201ENST00000526991 AEBP2Q6ZN18 517 aaPredicted RBP15.9■□□□□ 0.14
CHMP1B-201ENST00000526991 RNF123Q5XPI4 1314 aa15.9■□□□□ 0.14
CHMP1B-201ENST00000526991 MAGI2Q86UL8 1455 aa15.9■□□□□ 0.14
CHMP1B-201ENST00000526991 KIDINS220Q9ULH0 1771 aa15.9■□□□□ 0.14
CHMP1B-201ENST00000526991 FBXO31Q5XUX0 539 aaPredicted RBP15.89■□□□□ 0.13
CHMP1B-201ENST00000526991 YEATS2Q9ULM3 1422 aa15.89■□□□□ 0.13
CHMP1B-201ENST00000526991 ADAMTS8Q9UP79 889 aa15.88■□□□□ 0.13
CHMP1B-201ENST00000526991 PARD3Q8TEW0 1356 aa15.88■□□□□ 0.13
CHMP1B-201ENST00000526991 INO80Q9ULG1 1556 aaPredicted RBP15.88■□□□□ 0.13
CHMP1B-201ENST00000526991 TSPOAP1O95153 1857 aa15.87■□□□□ 0.13
CHMP1B-201ENST00000526991 POGZQ7Z3K3 1410 aa15.87■□□□□ 0.13
CHMP1B-201ENST00000526991 KNSTRNQ9Y448 316 aa15.87■□□□□ 0.13
CHMP1B-201ENST00000526991 PRDM15P57071 1507 aaPredicted RBP15.87■□□□□ 0.13
CHMP1B-201ENST00000526991 NOS1P29475 1434 aa15.86■□□□□ 0.13
CHMP1B-201ENST00000526991 RTN4Q9NQC3 1192 aaKnown RBP15.86■□□□□ 0.13
CHMP1B-201ENST00000526991 CCDC146Q8IYE0 955 aa15.85■□□□□ 0.13
CHMP1B-201ENST00000526991 CEP152O94986 1710 aa15.84■□□□□ 0.13
CHMP1B-201ENST00000526991 NPATQ14207 1427 aa15.84■□□□□ 0.13
CHMP1B-201ENST00000526991 ARAP3Q8WWN8 1544 aa15.83■□□□□ 0.12
CHMP1B-201ENST00000526991 SPHKAPQ2M3C7 1700 aa15.83■□□□□ 0.12
CHMP1B-201ENST00000526991 IDI1Q13907 227 aa15.83■□□□□ 0.12
CHMP1B-201ENST00000526991 NOP58Q9Y2X3 529 aaKnown RBP15.83■□□□□ 0.12
CHMP1B-201ENST00000526991 GPRASP1Q5JY77 1395 aa15.83■□□□□ 0.12
CHMP1B-201ENST00000526991 C20orf194Q5TEA3 1177 aa15.82■□□□□ 0.12
CHMP1B-201ENST00000526991 WDR43Q15061 677 aaKnown RBP eCLIP15.82■□□□□ 0.12
CHMP1B-201ENST00000526991 CRBNQ96SW2 442 aa15.82■□□□□ 0.12
CHMP1B-201ENST00000526991 TRPM2O94759 1503 aa15.82■□□□□ 0.12
CHMP1B-201ENST00000526991 MROH1Q8NDA8 1641 aa15.82■□□□□ 0.12
CHMP1B-201ENST00000526991 COL17A1Q9UMD9 1497 aaPredicted RBP15.82■□□□□ 0.12
CHMP1B-201ENST00000526991 STAG3Q9UJ98 1225 aa15.81■□□□□ 0.12
CHMP1B-201ENST00000526991 PTPRTO14522 1441 aa15.81■□□□□ 0.12
CHMP1B-201ENST00000526991 ANP32AP39687 249 aaKnown RBP15.81■□□□□ 0.12
CHMP1B-201ENST00000526991 PPRC1Q5VV67 1664 aaKnown RBP15.8■□□□□ 0.12
CHMP1B-201ENST00000526991 PPP2R1AP30153 589 aa15.8■□□□□ 0.12
CHMP1B-201ENST00000526991 TET3O43151 1660 aa15.79■□□□□ 0.12
CHMP1B-201ENST00000526991 FRMPD1Q5SYB0 1578 aa15.79■□□□□ 0.12
CHMP1B-201ENST00000526991 SLC12A5Q9H2X9 1139 aa15.79■□□□□ 0.12
CHMP1B-201ENST00000526991 ABCA6Q8N139 1617 aa15.78■□□□□ 0.12
CHMP1B-201ENST00000526991 MADDQ8WXG6 1647 aa15.77■□□□□ 0.12
CHMP1B-201ENST00000526991 PDE3BQ13370 1112 aa15.76■□□□□ 0.11
CHMP1B-201ENST00000526991 DEPDC5O75140 1603 aa15.76■□□□□ 0.11
CHMP1B-201ENST00000526991 EFCAB6Q5THR3 1501 aa15.75■□□□□ 0.11
CHMP1B-201ENST00000526991 AMER1Q5JTC6 1135 aaPredicted RBP15.75■□□□□ 0.11
CHMP1B-201ENST00000526991 RIMBP3CA6NJZ7 1639 aa15.75■□□□□ 0.11
CHMP1B-201ENST00000526991 RIMBP3BA6NNM3 1639 aa15.75■□□□□ 0.11
CHMP1B-201ENST00000526991 RIMBP3Q9UFD9 1639 aa15.75■□□□□ 0.11
CHMP1B-201ENST00000526991 HECW2Q9P2P5 1572 aa15.75■□□□□ 0.11
CHMP1B-201ENST00000526991 SCAF11Q99590 1463 aaKnown RBP15.75■□□□□ 0.11
CHMP1B-201ENST00000526991 ZBTB47Q9UFB7 747 aaPredicted RBP15.74■□□□□ 0.11
CHMP1B-201ENST00000526991 MROH2AA6NES4 1674 aa15.74■□□□□ 0.11
CHMP1B-201ENST00000526991 CARD14Q9BXL6 1004 aa15.74■□□□□ 0.11
CHMP1B-201ENST00000526991 CABP2Q9NPB3 220 aa15.74■□□□□ 0.11
CHMP1B-201ENST00000526991 RNF17Q9BXT8 1623 aaKnown RBP15.73■□□□□ 0.11
CHMP1B-201ENST00000526991 IPO9Q96P70 1041 aaKnown RBP15.73■□□□□ 0.11
CHMP1B-201ENST00000526991 PLEKHH1Q9ULM0 1364 aa15.73■□□□□ 0.11
CHMP1B-201ENST00000526991 CENPJQ9HC77 1338 aaPredicted RBP15.73■□□□□ 0.11
CHMP1B-201ENST00000526991 MLH3Q9UHC1 1453 aa15.73■□□□□ 0.11
CHMP1B-201ENST00000526991 PDE4AP27815 886 aa15.72■□□□□ 0.11
CHMP1B-201ENST00000526991 EIF2AK4Q9P2K8 1649 aaKnown RBP15.72■□□□□ 0.11
CHMP1B-201ENST00000526991 APAF1O14727 1248 aa15.72■□□□□ 0.11
CHMP1B-201ENST00000526991 NEUROD2Q15784 382 aa15.72■□□□□ 0.11
CHMP1B-201ENST00000526991 VWDEQ8N2E2 1590 aa15.72■□□□□ 0.11
CHMP1B-201ENST00000526991 DEKP35659 375 aaKnown RBP15.71■□□□□ 0.11
CHMP1B-201ENST00000526991 MINK1Q8N4C8 1332 aaPredicted RBP15.71■□□□□ 0.11
CHMP1B-201ENST00000526991 SPINK5Q9NQ38 1064 aaPredicted RBP15.7■□□□□ 0.1
CHMP1B-201ENST00000526991 LAS1LQ9Y4W2 734 aaKnown RBP15.7■□□□□ 0.1
CHMP1B-201ENST00000526991 KIF1BO60333 1816 aa15.69■□□□□ 0.1
CHMP1B-201ENST00000526991 ABCC3O15438 1527 aa15.69■□□□□ 0.1
CHMP1B-201ENST00000526991 EIF3AQ14152 1382 aaKnown RBP15.69■□□□□ 0.1
CHMP1B-201ENST00000526991 SRPK2P78362 688 aaKnown RBP15.68■□□□□ 0.1
CHMP1B-201ENST00000526991 CDCA8Q53HL2 280 aa15.68■□□□□ 0.1
CHMP1B-201ENST00000526991 GOLGA2Q08379 1002 aa15.68■□□□□ 0.1
CHMP1B-201ENST00000526991 DUSP27Q5VZP5 1158 aa15.68■□□□□ 0.1
CHMP1B-201ENST00000526991 C14orf93Q9H972 538 aaKnown RBP15.68■□□□□ 0.1
CHMP1B-201ENST00000526991 DIP2CQ9Y2E4 1556 aa15.68■□□□□ 0.1
CHMP1B-201ENST00000526991 NEO1Q92859 1461 aa15.67■□□□□ 0.1
CHMP1B-201ENST00000526991 DMRT2Q9Y5R5 561 aa15.67■□□□□ 0.1
CHMP1B-201ENST00000526991 BLMP54132 1417 aaPredicted RBP15.67■□□□□ 0.1
CHMP1B-201ENST00000526991 TCERG1O14776 1098 aaKnown RBP15.66■□□□□ 0.1
CHMP1B-201ENST00000526991 RRP7AQ9Y3A4 280 aaKnown RBP15.66■□□□□ 0.1
CHMP1B-201ENST00000526991 ESF1Q9H501 851 aaKnown RBP15.66■□□□□ 0.1
CHMP1B-201ENST00000526991 SIGLEC1Q9BZZ2 1709 aa15.66■□□□□ 0.1
CHMP1B-201ENST00000526991 VGFO15240 615 aaPredicted RBP15.66■□□□□ 0.1
CHMP1B-201ENST00000526991 BCAR3O75815 825 aa15.65■□□□□ 0.1
CHMP1B-201ENST00000526991 POGKQ9P215 609 aa15.65■□□□□ 0.1
CHMP1B-201ENST00000526991 MAP3K4Q9Y6R4 1608 aa15.65■□□□□ 0.1
CHMP1B-201ENST00000526991 RGS3P49796 1198 aa15.65■□□□□ 0.1
CHMP1B-201ENST00000526991 A0A0U1RQG5 324 aaPredicted RBP15.64■□□□□ 0.09
CHMP1B-201ENST00000526991 FBLN1P23142 703 aa15.64■□□□□ 0.09
CHMP1B-201ENST00000526991 CEBPAP49715 358 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms