RNA–Protein interactions for RNA: ENST00000526789.1

COMMD9-204, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-204ENST00000526789 C7P10643 843 aa11.58□□□□□ -0.56
COMMD9-204ENST00000526789 RGS17Q9UGC6 210 aaPredicted RBP11.58□□□□□ -0.56
COMMD9-204ENST00000526789 WASHC2CQ9Y4E1 1318 aa11.58□□□□□ -0.56
COMMD9-204ENST00000526789 CCNB3Q8WWL7 1395 aa11.57□□□□□ -0.56
COMMD9-204ENST00000526789 FAM135AQ9P2D6 1515 aa11.57□□□□□ -0.56
COMMD9-204ENST00000526789 SLC24A1O60721 1099 aa11.57□□□□□ -0.56
COMMD9-204ENST00000526789 MNX1P50219 401 aaPredicted RBP11.57□□□□□ -0.56
COMMD9-204ENST00000526789 SLC39A7Q92504 469 aa11.57□□□□□ -0.56
COMMD9-204ENST00000526789 ADGBQ8N7X0 1667 aa11.56□□□□□ -0.56
COMMD9-204ENST00000526789 ASTLQ6HA08 431 aaPredicted RBP11.56□□□□□ -0.56
COMMD9-204ENST00000526789 VWDEQ8N2E2 1590 aa11.56□□□□□ -0.56
COMMD9-204ENST00000526789 PLEKHH2Q8IVE3 1493 aa11.56□□□□□ -0.56
COMMD9-204ENST00000526789 PLXNC1O60486 1568 aa11.55□□□□□ -0.56
COMMD9-204ENST00000526789 UGGT1Q9NYU2 1555 aa11.55□□□□□ -0.56
COMMD9-204ENST00000526789 INO80Q9ULG1 1556 aaPredicted RBP11.55□□□□□ -0.56
COMMD9-204ENST00000526789 NUBP1P53384 320 aa11.55□□□□□ -0.56
COMMD9-204ENST00000526789 POTEAQ6S8J7 498 aa11.55□□□□□ -0.56
COMMD9-204ENST00000526789 RNF17Q9BXT8 1623 aaKnown RBP11.55□□□□□ -0.56
COMMD9-204ENST00000526789 IQGAP1P46940 1657 aa11.54□□□□□ -0.56
COMMD9-204ENST00000526789 GPATCH8Q9UKJ3 1502 aaKnown RBP11.54□□□□□ -0.56
COMMD9-204ENST00000526789 CASKIN1Q8WXD9 1431 aa11.53□□□□□ -0.56
COMMD9-204ENST00000526789 ATMINO43313 823 aaPredicted RBP11.53□□□□□ -0.56
COMMD9-204ENST00000526789 LRRC7Q96NW7 1537 aa11.53□□□□□ -0.56
COMMD9-204ENST00000526789 ALKQ9UM73 1620 aa11.53□□□□□ -0.56
COMMD9-204ENST00000526789 SCUBE2Q9NQ36 999 aa11.52□□□□□ -0.57
COMMD9-204ENST00000526789 SETD1AO15047 1707 aaKnown RBP11.52□□□□□ -0.57
COMMD9-204ENST00000526789 KIAA1107Q9UPP5 1409 aa11.52□□□□□ -0.57
COMMD9-204ENST00000526789 RGL2O15211 777 aa11.51□□□□□ -0.57
COMMD9-204ENST00000526789 ZNF644Q9H582 1327 aaPredicted RBP11.51□□□□□ -0.57
COMMD9-204ENST00000526789 MTUS2Q5JR59 1369 aa11.51□□□□□ -0.57
COMMD9-204ENST00000526789 MIA2Q96PC5 1412 aa11.51□□□□□ -0.57
COMMD9-204ENST00000526789 PZPP20742 1482 aa11.51□□□□□ -0.57
COMMD9-204ENST00000526789 NLRP1Q9C000 1473 aa11.51□□□□□ -0.57
COMMD9-204ENST00000526789 KDM5DQ9BY66 1539 aa11.5□□□□□ -0.57
COMMD9-204ENST00000526789 SYNMO15061 1565 aa11.5□□□□□ -0.57
COMMD9-204ENST00000526789 STRCP1A6NGW2 1772 aa11.5□□□□□ -0.57
COMMD9-204ENST00000526789 DEPDC5O75140 1603 aa11.49□□□□□ -0.57
COMMD9-204ENST00000526789 MEX3CQ5U5Q3 659 aaKnown RBP11.49□□□□□ -0.57
COMMD9-204ENST00000526789 DHX29Q7Z478 1369 aaKnown RBP11.49□□□□□ -0.57
COMMD9-204ENST00000526789 GSE1Q14687 1217 aa11.48□□□□□ -0.57
COMMD9-204ENST00000526789 CDAN1Q8IWY9 1227 aa11.48□□□□□ -0.57
COMMD9-204ENST00000526789 TRIM52Q96A61 297 aa11.48□□□□□ -0.57
COMMD9-204ENST00000526789 MS4A3Q96HJ5 214 aa11.48□□□□□ -0.57
COMMD9-204ENST00000526789 MED14O60244 1454 aa11.48□□□□□ -0.57
COMMD9-204ENST00000526789 CFAP65Q6ZU64 1925 aaKnown RBP11.48□□□□□ -0.57
COMMD9-204ENST00000526789 TXNDC2Q86VQ3 553 aa11.47□□□□□ -0.57
COMMD9-204ENST00000526789 FYCO1Q9BQS8 1478 aa11.46□□□□□ -0.57
COMMD9-204ENST00000526789 DCAF8Q5TAQ9 597 aa11.46□□□□□ -0.57
COMMD9-204ENST00000526789 BCANQ96GW7 911 aa11.46□□□□□ -0.57
COMMD9-204ENST00000526789 EID1Q9Y6B2 187 aa11.46□□□□□ -0.57
COMMD9-204ENST00000526789 RASEFQ8IZ41 740 aa11.45□□□□□ -0.58
COMMD9-204ENST00000526789 RBM33Q96EV2 1170 aaKnown RBP11.45□□□□□ -0.58
COMMD9-204ENST00000526789 FAM212AQ96EL1 285 aa11.44□□□□□ -0.58
COMMD9-204ENST00000526789 RTEL1-TNFRSF6BF6WH68 1400 aa11.43□□□□□ -0.58
COMMD9-204ENST00000526789 TSPY4P0CV99 314 aa11.43□□□□□ -0.58
COMMD9-204ENST00000526789 TSPY10P0CW01 314 aa11.43□□□□□ -0.58
COMMD9-204ENST00000526789 PROSER2Q86WR7 435 aaPredicted RBP11.43□□□□□ -0.58
COMMD9-204ENST00000526789 SCAF11Q99590 1463 aaKnown RBP11.43□□□□□ -0.58
COMMD9-204ENST00000526789 FAM135BQ49AJ0 1406 aa11.42□□□□□ -0.58
COMMD9-204ENST00000526789 ROBO1Q9Y6N7 1651 aa11.41□□□□□ -0.58
COMMD9-204ENST00000526789 UPF1Q92900 1129 aaKnown RBP eCLIP11.41□□□□□ -0.58
COMMD9-204ENST00000526789 TMEM94Q12767 1356 aa11.41□□□□□ -0.58
COMMD9-204ENST00000526789 CCDC141Q6ZP82 1450 aa11.4□□□□□ -0.58
COMMD9-204ENST00000526789 LTKP29376 864 aa11.4□□□□□ -0.58
COMMD9-204ENST00000526789 XIRP1Q702N8 1843 aaKnown RBP11.39□□□□□ -0.59
COMMD9-204ENST00000526789 MBD5Q9P267 1494 aa11.39□□□□□ -0.59
COMMD9-204ENST00000526789 TIAM1Q13009 1591 aa11.39□□□□□ -0.59
COMMD9-204ENST00000526789 ZNF772Q68DY9 489 aaPredicted RBP11.39□□□□□ -0.59
COMMD9-204ENST00000526789 C14orf37Q86TY3 774 aa11.39□□□□□ -0.59
COMMD9-204ENST00000526789 ZC3H13Q5T200 1668 aaKnown RBP11.39□□□□□ -0.59
COMMD9-204ENST00000526789 PHLPP1O60346 1717 aa11.38□□□□□ -0.59
COMMD9-204ENST00000526789 ATN1P54259 1190 aaPredicted RBP11.38□□□□□ -0.59
COMMD9-204ENST00000526789 SLC26A8Q96RN1 970 aa11.38□□□□□ -0.59
COMMD9-204ENST00000526789 JCADQ9P266 1359 aa11.38□□□□□ -0.59
COMMD9-204ENST00000526789 ERVK-7P63135 1459 aa11.38□□□□□ -0.59
COMMD9-204ENST00000526789 RSPH4AQ5TD94 716 aa11.37□□□□□ -0.59
COMMD9-204ENST00000526789 MSH6P52701 1360 aa11.37□□□□□ -0.59
COMMD9-204ENST00000526789 UBR1Q8IWV7 1749 aa11.37□□□□□ -0.59
COMMD9-204ENST00000526789 NUTM2BA6NNL0 878 aaPredicted RBP11.36□□□□□ -0.59
COMMD9-204ENST00000526789 NUTM2EB1AL46 878 aaPredicted RBP11.36□□□□□ -0.59
COMMD9-204ENST00000526789 RXRBP28702 533 aa11.36□□□□□ -0.59
COMMD9-204ENST00000526789 PLCB2Q00722 1185 aa11.36□□□□□ -0.59
COMMD9-204ENST00000526789 NUTM2AQ8IVF1 878 aaPredicted RBP11.36□□□□□ -0.59
COMMD9-204ENST00000526789 RNF25Q96BH1 459 aaPredicted RBP11.36□□□□□ -0.59
COMMD9-204ENST00000526789 CAMSAP2Q08AD1 1489 aa11.36□□□□□ -0.59
COMMD9-204ENST00000526789 ABCC3O15438 1527 aa11.35□□□□□ -0.59
COMMD9-204ENST00000526789 KCNA6P17658 529 aa11.35□□□□□ -0.59
COMMD9-204ENST00000526789 SLAIN2Q9P270 581 aa11.35□□□□□ -0.59
COMMD9-204ENST00000526789 LRRC9Q6ZRR7 1453 aa11.35□□□□□ -0.59
COMMD9-204ENST00000526789 CEP152O94986 1710 aa11.35□□□□□ -0.59
COMMD9-204ENST00000526789 EHBP1L1Q8N3D4 1523 aa11.35□□□□□ -0.59
COMMD9-204ENST00000526789 POTEFA5A3E0 1075 aa11.34□□□□□ -0.59
COMMD9-204ENST00000526789 NUTM2DQ5VT03 806 aaPredicted RBP11.33□□□□□ -0.6
COMMD9-204ENST00000526789 NCOA2Q15596 1464 aa11.32□□□□□ -0.6
COMMD9-204ENST00000526789 PPP1R15AO75807 674 aaPredicted RBP11.31□□□□□ -0.6
COMMD9-204ENST00000526789 SPATA31A6Q5VVP1 1343 aa11.31□□□□□ -0.6
COMMD9-204ENST00000526789 TMEM2Q9UHN6 1383 aa11.3□□□□□ -0.6
COMMD9-204ENST00000526789 CEP162Q5TB80 1403 aa11.3□□□□□ -0.6
COMMD9-204ENST00000526789 BBXQ8WY36 941 aaPredicted RBP11.3□□□□□ -0.6
COMMD9-204ENST00000526789 TSPYL2Q9H2G4 693 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms