RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 NEURL4Q96JN8 1562 aa15.47■□□□□ 0.07
LINC01001-201ENST00000526704 ASXL1Q8IXJ9 1541 aa15.47■□□□□ 0.07
LINC01001-201ENST00000526704 MYT1LQ9UL68 1186 aa15.46■□□□□ 0.07
LINC01001-201ENST00000526704 MROH1Q8NDA8 1641 aa15.46■□□□□ 0.07
LINC01001-201ENST00000526704 KIF1BO60333 1816 aa15.46■□□□□ 0.06
LINC01001-201ENST00000526704 ABCA6Q8N139 1617 aa15.45■□□□□ 0.06
LINC01001-201ENST00000526704 TCERG1O14776 1098 aaKnown RBP15.45■□□□□ 0.06
LINC01001-201ENST00000526704 PLIN1O60240 522 aa15.44■□□□□ 0.06
LINC01001-201ENST00000526704 MAP3K4Q9Y6R4 1608 aa15.44■□□□□ 0.06
LINC01001-201ENST00000526704 PPP2R1AP30153 589 aa15.44■□□□□ 0.06
LINC01001-201ENST00000526704 AMER1Q5JTC6 1135 aaPredicted RBP15.44■□□□□ 0.06
LINC01001-201ENST00000526704 ADAMTS8Q9UP79 889 aa15.44■□□□□ 0.06
LINC01001-201ENST00000526704 MROH2AA6NES4 1674 aa15.43■□□□□ 0.06
LINC01001-201ENST00000526704 AFAP1Q8N556 730 aa15.43■□□□□ 0.06
LINC01001-201ENST00000526704 KNSTRNQ9Y448 316 aa15.43■□□□□ 0.06
LINC01001-201ENST00000526704 PLEKHH1Q9ULM0 1364 aa15.43■□□□□ 0.06
LINC01001-201ENST00000526704 PIK3C2GO75747 1445 aa15.42■□□□□ 0.06
LINC01001-201ENST00000526704 CRBNQ96SW2 442 aa15.42■□□□□ 0.06
LINC01001-201ENST00000526704 UGGT1Q9NYU2 1555 aa15.42■□□□□ 0.06
LINC01001-201ENST00000526704 FANCAO15360 1455 aa15.4■□□□□ 0.06
LINC01001-201ENST00000526704 MYOM2P54296 1465 aa15.4■□□□□ 0.06
LINC01001-201ENST00000526704 STAC3Q96MF2 364 aa15.4■□□□□ 0.06
LINC01001-201ENST00000526704 EIF3AQ14152 1382 aaKnown RBP15.4■□□□□ 0.06
LINC01001-201ENST00000526704 MS4A1P11836 297 aa15.4■□□□□ 0.06
LINC01001-201ENST00000526704 MYO3AQ8NEV4 1616 aa15.4■□□□□ 0.06
LINC01001-201ENST00000526704 ZNF521Q96K83 1311 aa15.39■□□□□ 0.05
LINC01001-201ENST00000526704 PDE4AP27815 886 aa15.39■□□□□ 0.05
LINC01001-201ENST00000526704 NBR1Q14596 966 aa15.39■□□□□ 0.05
LINC01001-201ENST00000526704 CDCA8Q53HL2 280 aa15.39■□□□□ 0.05
LINC01001-201ENST00000526704 NPC1L1Q9UHC9 1359 aa15.39■□□□□ 0.05
LINC01001-201ENST00000526704 ZBTB47Q9UFB7 747 aaPredicted RBP15.39■□□□□ 0.05
LINC01001-201ENST00000526704 EFCAB6Q5THR3 1501 aa15.39■□□□□ 0.05
LINC01001-201ENST00000526704 KANK1Q14678 1352 aa15.39■□□□□ 0.05
LINC01001-201ENST00000526704 PPRC1Q5VV67 1664 aaKnown RBP15.39■□□□□ 0.05
LINC01001-201ENST00000526704 BACH2Q9BYV9 841 aa15.38■□□□□ 0.05
LINC01001-201ENST00000526704 WDR43Q15061 677 aaKnown RBP eCLIP15.38■□□□□ 0.05
LINC01001-201ENST00000526704 ERVK-7P63135 1459 aa15.38■□□□□ 0.05
LINC01001-201ENST00000526704 DEKP35659 375 aaKnown RBP15.37■□□□□ 0.05
LINC01001-201ENST00000526704 KIDINS220Q9ULH0 1771 aa15.37■□□□□ 0.05
LINC01001-201ENST00000526704 C20orf194Q5TEA3 1177 aa15.37■□□□□ 0.05
LINC01001-201ENST00000526704 DUSP27Q5VZP5 1158 aa15.37■□□□□ 0.05
LINC01001-201ENST00000526704 ADGRL1O94910 1474 aa15.36■□□□□ 0.05
LINC01001-201ENST00000526704 ZC3H13Q5T200 1668 aaKnown RBP15.36■□□□□ 0.05
LINC01001-201ENST00000526704 NPM2Q86SE8 214 aaKnown RBP15.35■□□□□ 0.05
LINC01001-201ENST00000526704 KDM2BQ8NHM5 1336 aa15.34■□□□□ 0.05
LINC01001-201ENST00000526704 NRXN1Q9ULB1 1477 aa15.34■□□□□ 0.05
LINC01001-201ENST00000526704 SKAP1Q86WV1 359 aa15.33■□□□□ 0.05
LINC01001-201ENST00000526704 KIF3BO15066 747 aa15.32■□□□□ 0.04
LINC01001-201ENST00000526704 PPLO60437 1756 aa15.32■□□□□ 0.04
LINC01001-201ENST00000526704 GOLGA2Q08379 1002 aa15.32■□□□□ 0.04
LINC01001-201ENST00000526704 ADGRB3O60242 1522 aa15.32■□□□□ 0.04
LINC01001-201ENST00000526704 LMTK2Q8IWU2 1503 aa15.31■□□□□ 0.04
LINC01001-201ENST00000526704 PRKCSHP14314 528 aaPredicted RBP15.31■□□□□ 0.04
LINC01001-201ENST00000526704 ADGRF5Q8IZF2 1346 aa15.31■□□□□ 0.04
LINC01001-201ENST00000526704 SHPRHQ149N8 1683 aa15.31■□□□□ 0.04
LINC01001-201ENST00000526704 QRICH2Q9H0J4 1663 aa15.31■□□□□ 0.04
LINC01001-201ENST00000526704 CFAP70Q5T0N1 1121 aa15.31■□□□□ 0.04
LINC01001-201ENST00000526704 SETBP1Q9Y6X0 1596 aa15.3■□□□□ 0.04
LINC01001-201ENST00000526704 SLFN5Q08AF3 891 aa15.3■□□□□ 0.04
LINC01001-201ENST00000526704 CFAP65Q6ZU64 1925 aaKnown RBP15.3■□□□□ 0.04
LINC01001-201ENST00000526704 CCDC146Q8IYE0 955 aa15.29■□□□□ 0.04
LINC01001-201ENST00000526704 TRMT2AQ8IZ69 625 aaKnown RBP15.29■□□□□ 0.04
LINC01001-201ENST00000526704 VIRMAQ69YN4 1812 aaKnown RBP15.29■□□□□ 0.04
LINC01001-201ENST00000526704 NKTRP30414 1462 aaKnown RBP15.28■□□□□ 0.04
LINC01001-201ENST00000526704 SBNO2Q9Y2G9 1366 aa15.27■□□□□ 0.04
LINC01001-201ENST00000526704 CENPQQ7L2Z9 268 aaPredicted RBP15.27■□□□□ 0.03
LINC01001-201ENST00000526704 CARD14Q9BXL6 1004 aa15.27■□□□□ 0.03
LINC01001-201ENST00000526704 SPINK5Q9NQ38 1064 aaPredicted RBP15.26■□□□□ 0.03
LINC01001-201ENST00000526704 ASXL2Q76L83 1435 aa15.26■□□□□ 0.03
LINC01001-201ENST00000526704 RTL5Q5HYW3 569 aaPredicted RBP15.26■□□□□ 0.03
LINC01001-201ENST00000526704 APAF1O14727 1248 aa15.25■□□□□ 0.03
LINC01001-201ENST00000526704 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.25■□□□□ 0.03
LINC01001-201ENST00000526704 NOS1P29475 1434 aa15.25■□□□□ 0.03
LINC01001-201ENST00000526704 FRMPD1Q5SYB0 1578 aa15.25■□□□□ 0.03
LINC01001-201ENST00000526704 SLC24A1O60721 1099 aa15.25■□□□□ 0.03
LINC01001-201ENST00000526704 USP32Q8NFA0 1604 aa15.24■□□□□ 0.03
LINC01001-201ENST00000526704 ZNF518AQ6AHZ1 1483 aa15.24■□□□□ 0.03
LINC01001-201ENST00000526704 ADGRB1O14514 1584 aa15.23■□□□□ 0.03
LINC01001-201ENST00000526704 HECW2Q9P2P5 1572 aa15.23■□□□□ 0.03
LINC01001-201ENST00000526704 CFAP74Q9C0B2 1584 aa15.22■□□□□ 0.03
LINC01001-201ENST00000526704 POLR3AO14802 1390 aaPredicted RBP15.22■□□□□ 0.03
LINC01001-201ENST00000526704 LAS1LQ9Y4W2 734 aaKnown RBP15.21■□□□□ 0.03
LINC01001-201ENST00000526704 DMRT2Q9Y5R5 561 aa15.21■□□□□ 0.03
LINC01001-201ENST00000526704 E9PSI1 815 aa15.21■□□□□ 0.02
LINC01001-201ENST00000526704 NPATQ14207 1427 aa15.2■□□□□ 0.02
LINC01001-201ENST00000526704 CENPJQ9HC77 1338 aaPredicted RBP15.2■□□□□ 0.02
LINC01001-201ENST00000526704 SIGLEC1Q9BZZ2 1709 aa15.2■□□□□ 0.02
LINC01001-201ENST00000526704 NSD3Q9BZ95 1437 aa15.2■□□□□ 0.02
LINC01001-201ENST00000526704 ARHGEF28Q8N1W1 1705 aaKnown RBP15.2■□□□□ 0.02
LINC01001-201ENST00000526704 BCAR3O75815 825 aa15.19■□□□□ 0.02
LINC01001-201ENST00000526704 DDRGK1Q96HY6 314 aa15.19■□□□□ 0.02
LINC01001-201ENST00000526704 CAMSAP1Q5T5Y3 1602 aa15.19■□□□□ 0.02
LINC01001-201ENST00000526704 IQSEC2Q5JU85 1478 aa15.19■□□□□ 0.02
LINC01001-201ENST00000526704 GLI2P10070 1586 aa15.18■□□□□ 0.02
LINC01001-201ENST00000526704 C8orf34Q49A92 452 aa15.18■□□□□ 0.02
LINC01001-201ENST00000526704 POGZQ7Z3K3 1410 aa15.18■□□□□ 0.02
LINC01001-201ENST00000526704 NGEFQ8N5V2 710 aa15.18■□□□□ 0.02
LINC01001-201ENST00000526704 ABCC3O15438 1527 aa15.17■□□□□ 0.02
LINC01001-201ENST00000526704 PIK3C2BO00750 1634 aa15.17■□□□□ 0.02
LINC01001-201ENST00000526704 FAM161AQ3B820 660 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms