RNA–Protein interactions for RNA: ENST00000525746.1

LINC01016-202, Transcript of long intergenic non-protein coding RNA 1016, humanhuman

TSL 2

Gene LINC01016, Length 710 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01016-202ENST00000525746 UPF1Q92900 1129 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC01016-202ENST00000525746 SYNMO15061 1565 aa11.27□□□□□ -0.61
LINC01016-202ENST00000525746 KDM5DQ9BY66 1539 aa11.26□□□□□ -0.61
LINC01016-202ENST00000525746 KIF3BO15066 747 aa11.26□□□□□ -0.61
LINC01016-202ENST00000525746 CLSPNQ9HAW4 1339 aa11.26□□□□□ -0.61
LINC01016-202ENST00000525746 CDC42BPAQ5VT25 1732 aa11.26□□□□□ -0.61
LINC01016-202ENST00000525746 ADGBQ8N7X0 1667 aa11.25□□□□□ -0.61
LINC01016-202ENST00000525746 SRCAPQ6ZRS2 3230 aa11.24□□□□□ -0.61
LINC01016-202ENST00000525746 PTPN23Q9H3S7 1636 aa11.24□□□□□ -0.61
LINC01016-202ENST00000525746 FAM50AQ14320 339 aaKnown RBP11.24□□□□□ -0.61
LINC01016-202ENST00000525746 ZNF692Q9BU19 519 aaPredicted RBP11.24□□□□□ -0.61
LINC01016-202ENST00000525746 RTN4Q9NQC3 1192 aaKnown RBP11.24□□□□□ -0.61
LINC01016-202ENST00000525746 SETD5Q9C0A6 1442 aa11.24□□□□□ -0.61
LINC01016-202ENST00000525746 IQGAP1P46940 1657 aa11.24□□□□□ -0.61
LINC01016-202ENST00000525746 ZNF772Q68DY9 489 aaPredicted RBP11.23□□□□□ -0.61
LINC01016-202ENST00000525746 SSUH2Q9Y2M2 353 aa11.23□□□□□ -0.61
LINC01016-202ENST00000525746 PRKAR2AP13861 404 aaKnown RBP11.22□□□□□ -0.61
LINC01016-202ENST00000525746 DHX57Q6P158 1386 aaKnown RBP11.22□□□□□ -0.61
LINC01016-202ENST00000525746 MBD5Q9P267 1494 aa11.22□□□□□ -0.61
LINC01016-202ENST00000525746 STRCP1A6NGW2 1772 aa11.21□□□□□ -0.62
LINC01016-202ENST00000525746 RAB3GAP2Q9H2M9 1393 aa11.2□□□□□ -0.62
LINC01016-202ENST00000525746 JCADQ9P266 1359 aa11.2□□□□□ -0.62
LINC01016-202ENST00000525746 KCNA6P17658 529 aa11.2□□□□□ -0.62
LINC01016-202ENST00000525746 TXNDC2Q86VQ3 553 aa11.2□□□□□ -0.62
LINC01016-202ENST00000525746 EID1Q9Y6B2 187 aa11.2□□□□□ -0.62
LINC01016-202ENST00000525746 HFM1A2PYH4 1435 aa11.19□□□□□ -0.62
LINC01016-202ENST00000525746 C19orf67A6NJJ6 358 aa11.19□□□□□ -0.62
LINC01016-202ENST00000525746 ITGAEP38570 1179 aa11.19□□□□□ -0.62
LINC01016-202ENST00000525746 SCAF11Q99590 1463 aaKnown RBP11.19□□□□□ -0.62
LINC01016-202ENST00000525746 SPATA31A6Q5VVP1 1343 aa11.18□□□□□ -0.62
LINC01016-202ENST00000525746 LTKP29376 864 aa11.18□□□□□ -0.62
LINC01016-202ENST00000525746 SLAIN2Q9P270 581 aa11.17□□□□□ -0.62
LINC01016-202ENST00000525746 ARHGAP23Q9P227 1491 aa11.17□□□□□ -0.62
LINC01016-202ENST00000525746 TMEM94Q12767 1356 aa11.16□□□□□ -0.62
LINC01016-202ENST00000525746 ZNF644Q9H582 1327 aaPredicted RBP11.16□□□□□ -0.62
LINC01016-202ENST00000525746 RXRBP28702 533 aa11.16□□□□□ -0.62
LINC01016-202ENST00000525746 NAIPQ13075 1403 aa11.16□□□□□ -0.62
LINC01016-202ENST00000525746 ROCK1Q13464 1354 aa11.16□□□□□ -0.62
LINC01016-202ENST00000525746 SLIT1O75093 1534 aa11.15□□□□□ -0.62
LINC01016-202ENST00000525746 ZC3H13Q5T200 1668 aaKnown RBP11.15□□□□□ -0.62
LINC01016-202ENST00000525746 CDK12Q9NYV4 1490 aaPredicted RBP11.15□□□□□ -0.62
LINC01016-202ENST00000525746 VASPP50552 380 aaPredicted RBP11.15□□□□□ -0.62
LINC01016-202ENST00000525746 PROSER2Q86WR7 435 aaPredicted RBP11.15□□□□□ -0.62
LINC01016-202ENST00000525746 TSPY4P0CV99 314 aa11.14□□□□□ -0.63
LINC01016-202ENST00000525746 TSPY10P0CW01 314 aa11.14□□□□□ -0.63
LINC01016-202ENST00000525746 SPDYE1Q8NFV5 336 aaPredicted RBP11.14□□□□□ -0.63
LINC01016-202ENST00000525746 CLEC11AQ9Y240 323 aa11.14□□□□□ -0.63
LINC01016-202ENST00000525746 ABCC5O15440 1437 aa11.14□□□□□ -0.63
LINC01016-202ENST00000525746 ACIN1Q9UKV3 1341 aaKnown RBP11.13□□□□□ -0.63
LINC01016-202ENST00000525746 DAPK1P53355 1430 aa11.13□□□□□ -0.63
LINC01016-202ENST00000525746 GABBR2O75899 941 aa11.13□□□□□ -0.63
LINC01016-202ENST00000525746 ERVK-7P63135 1459 aa11.12□□□□□ -0.63
LINC01016-202ENST00000525746 CAMSAP2Q08AD1 1489 aa11.12□□□□□ -0.63
LINC01016-202ENST00000525746 CCDC141Q6ZP82 1450 aa11.12□□□□□ -0.63
LINC01016-202ENST00000525746 MSH6P52701 1360 aa11.11□□□□□ -0.63
LINC01016-202ENST00000525746 TMEM2Q9UHN6 1383 aa11.11□□□□□ -0.63
LINC01016-202ENST00000525746 XIRP1Q702N8 1843 aaKnown RBP11.11□□□□□ -0.63
LINC01016-202ENST00000525746 ARHGAP31Q2M1Z3 1444 aa11.1□□□□□ -0.63
LINC01016-202ENST00000525746 NCOA3Q9Y6Q9 1424 aa11.1□□□□□ -0.63
LINC01016-202ENST00000525746 TRIM52Q96A61 297 aa11.1□□□□□ -0.63
LINC01016-202ENST00000525746 GCC2Q8IWJ2 1684 aa11.1□□□□□ -0.63
LINC01016-202ENST00000525746 ROBO1Q9Y6N7 1651 aa11.1□□□□□ -0.63
LINC01016-202ENST00000525746 ABCC3O15438 1527 aa11.09□□□□□ -0.63
LINC01016-202ENST00000525746 ADGRL2O95490 1459 aa11.09□□□□□ -0.63
LINC01016-202ENST00000525746 MEX3CQ5U5Q3 659 aaKnown RBP11.09□□□□□ -0.63
LINC01016-202ENST00000525746 PRDM15P57071 1507 aaPredicted RBP11.09□□□□□ -0.63
LINC01016-202ENST00000525746 NKTRP30414 1462 aaKnown RBP11.08□□□□□ -0.64
LINC01016-202ENST00000525746 ARHGEF5Q12774 1597 aa11.07□□□□□ -0.64
LINC01016-202ENST00000525746 SETD1AO15047 1707 aaKnown RBP11.07□□□□□ -0.64
LINC01016-202ENST00000525746 UBR1Q8IWV7 1749 aa11.07□□□□□ -0.64
LINC01016-202ENST00000525746 CROCC2H7BZ55 1655 aa11.05□□□□□ -0.64
LINC01016-202ENST00000525746 RBM6P78332 1123 aaKnown RBP11.05□□□□□ -0.64
LINC01016-202ENST00000525746 RRP7BPQ9NSQ0 103 aa11.05□□□□□ -0.64
LINC01016-202ENST00000525746 ZRANB1Q9UGI0 708 aa11.05□□□□□ -0.64
LINC01016-202ENST00000525746 STAG3Q9UJ98 1225 aa11.05□□□□□ -0.64
LINC01016-202ENST00000525746 TET3O43151 1660 aa11.04□□□□□ -0.64
LINC01016-202ENST00000525746 HDGFP51858 240 aaKnown RBP11.04□□□□□ -0.64
LINC01016-202ENST00000525746 CADPS2Q86UW7 1296 aa11.04□□□□□ -0.64
LINC01016-202ENST00000525746 SLC26A8Q96RN1 970 aa11.04□□□□□ -0.64
LINC01016-202ENST00000525746 CHIC2Q9UKJ5 165 aa11.04□□□□□ -0.64
LINC01016-202ENST00000525746 TIMELESSQ9UNS1 1208 aa11.04□□□□□ -0.64
LINC01016-202ENST00000525746 PHLPP1O60346 1717 aa11.04□□□□□ -0.64
LINC01016-202ENST00000525746 LRP6O75581 1613 aa11.03□□□□□ -0.64
LINC01016-202ENST00000525746 CCDC125Q86Z20 511 aa11.03□□□□□ -0.64
LINC01016-202ENST00000525746 C19orf44Q9H6X5 657 aa11.03□□□□□ -0.64
LINC01016-202ENST00000525746 IDI1Q13907 227 aa11.02□□□□□ -0.65
LINC01016-202ENST00000525746 CHADLQ6NUI6 762 aa11.02□□□□□ -0.65
LINC01016-202ENST00000525746 IFNLR1Q8IU57 520 aaPredicted RBP11.02□□□□□ -0.65
LINC01016-202ENST00000525746 COL16A1Q07092 1604 aaPredicted RBP11.02□□□□□ -0.65
LINC01016-202ENST00000525746 ANKRD30AQ9BXX3 1397 aa11.02□□□□□ -0.65
LINC01016-202ENST00000525746 KDM5AP29375 1690 aaKnown RBP11.01□□□□□ -0.65
LINC01016-202ENST00000525746 NGLY1Q96IV0 654 aa11.01□□□□□ -0.65
LINC01016-202ENST00000525746 QTRT2Q9H974 415 aaKnown RBP11.01□□□□□ -0.65
LINC01016-202ENST00000525746 SLC52A1Q9NWF4 448 aa11.01□□□□□ -0.65
LINC01016-202ENST00000525746 TBX22Q9Y458 520 aa11.01□□□□□ -0.65
LINC01016-202ENST00000525746 MAST1Q9Y2H9 1570 aa11.01□□□□□ -0.65
LINC01016-202ENST00000525746 EIF2AK4Q9P2K8 1649 aaKnown RBP11.01□□□□□ -0.65
LINC01016-202ENST00000525746 NWD1Q149M9 1564 aa11□□□□□ -0.65
LINC01016-202ENST00000525746 RBM33Q96EV2 1170 aaKnown RBP11□□□□□ -0.65
LINC01016-202ENST00000525746 AFF2P51816 1311 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms