RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 TESK2Q96S53 571 aa23.87■■□□□ 1.41
PCDHB18P-201ENST00000524813 SPAG9O60271 1321 aaKnown RBP23.87■■□□□ 1.41
PCDHB18P-201ENST00000524813 SLC4A3P48751 1232 aa23.86■■□□□ 1.41
PCDHB18P-201ENST00000524813 CFAP74Q9C0B2 1584 aa23.86■■□□□ 1.41
PCDHB18P-201ENST00000524813 GSE1Q14687 1217 aa23.86■■□□□ 1.41
PCDHB18P-201ENST00000524813 NFKBIBQ15653 356 aa23.86■■□□□ 1.41
PCDHB18P-201ENST00000524813 DUOX2Q9NRD8 1548 aa23.84■■□□□ 1.41
PCDHB18P-201ENST00000524813 CENPQQ7L2Z9 268 aaPredicted RBP23.83■■□□□ 1.41
PCDHB18P-201ENST00000524813 ERBINQ96RT1 1412 aa23.83■■□□□ 1.41
PCDHB18P-201ENST00000524813 INO80Q9ULG1 1556 aaPredicted RBP23.83■■□□□ 1.41
PCDHB18P-201ENST00000524813 ADAMTS8Q9UP79 889 aa23.83■■□□□ 1.4
PCDHB18P-201ENST00000524813 PRDM15P57071 1507 aaPredicted RBP23.82■■□□□ 1.4
PCDHB18P-201ENST00000524813 ATP7AQ04656 1500 aa23.82■■□□□ 1.4
PCDHB18P-201ENST00000524813 DAXXQ9UER7 740 aaPredicted RBP23.82■■□□□ 1.4
PCDHB18P-201ENST00000524813 MAP3K4Q9Y6R4 1608 aa23.82■■□□□ 1.4
PCDHB18P-201ENST00000524813 A2MP01023 1474 aa23.82■■□□□ 1.4
PCDHB18P-201ENST00000524813 LAMC1P11047 1609 aa23.8■■□□□ 1.4
PCDHB18P-201ENST00000524813 TMF1P82094 1093 aa23.79■■□□□ 1.4
PCDHB18P-201ENST00000524813 BRPF3Q9ULD4 1205 aa23.79■■□□□ 1.4
PCDHB18P-201ENST00000524813 UNC13BO14795 1591 aa23.79■■□□□ 1.4
PCDHB18P-201ENST00000524813 FAM161AQ3B820 660 aa23.79■■□□□ 1.4
PCDHB18P-201ENST00000524813 DIP2BQ9P265 1576 aa23.78■■□□□ 1.4
PCDHB18P-201ENST00000524813 PLA2R1Q13018 1463 aa23.78■■□□□ 1.4
PCDHB18P-201ENST00000524813 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.78■■□□□ 1.4
PCDHB18P-201ENST00000524813 RTEL1-TNFRSF6BF6WH68 1400 aa23.77■■□□□ 1.4
PCDHB18P-201ENST00000524813 C8orf34Q49A92 452 aa23.77■■□□□ 1.4
PCDHB18P-201ENST00000524813 DUSP27Q5VZP5 1158 aa23.77■■□□□ 1.4
PCDHB18P-201ENST00000524813 PLEKHH1Q9ULM0 1364 aa23.76■■□□□ 1.39
PCDHB18P-201ENST00000524813 TSPOAP1O95153 1857 aa23.76■■□□□ 1.39
PCDHB18P-201ENST00000524813 ZNF518AQ6AHZ1 1483 aa23.75■■□□□ 1.39
PCDHB18P-201ENST00000524813 FRAT1Q92837 279 aaPredicted RBP23.75■■□□□ 1.39
PCDHB18P-201ENST00000524813 GLI2P10070 1586 aa23.75■■□□□ 1.39
PCDHB18P-201ENST00000524813 FAM69CQ0P6D2 419 aa23.74■■□□□ 1.39
PCDHB18P-201ENST00000524813 KIDINS220Q9ULH0 1771 aa23.74■■□□□ 1.39
PCDHB18P-201ENST00000524813 POGZQ7Z3K3 1410 aa23.73■■□□□ 1.39
PCDHB18P-201ENST00000524813 WDR43Q15061 677 aaKnown RBP eCLIP23.73■■□□□ 1.39
PCDHB18P-201ENST00000524813 NEO1Q92859 1461 aa23.71■■□□□ 1.39
PCDHB18P-201ENST00000524813 PPP2R1AP30153 589 aa23.71■■□□□ 1.39
PCDHB18P-201ENST00000524813 EIF2AK4Q9P2K8 1649 aaKnown RBP23.71■■□□□ 1.39
PCDHB18P-201ENST00000524813 GOLGA2Q08379 1002 aa23.71■■□□□ 1.39
PCDHB18P-201ENST00000524813 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.71■■□□□ 1.39
PCDHB18P-201ENST00000524813 ZNF521Q96K83 1311 aa23.7■■□□□ 1.38
PCDHB18P-201ENST00000524813 IQGAP3Q86VI3 1631 aa23.7■■□□□ 1.38
PCDHB18P-201ENST00000524813 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.7■■□□□ 1.38
PCDHB18P-201ENST00000524813 RGS3P49796 1198 aa23.69■■□□□ 1.38
PCDHB18P-201ENST00000524813 KNSTRNQ9Y448 316 aa23.68■■□□□ 1.38
PCDHB18P-201ENST00000524813 MAGI2Q86UL8 1455 aa23.68■■□□□ 1.38
PCDHB18P-201ENST00000524813 HECW2Q9P2P5 1572 aa23.67■■□□□ 1.38
PCDHB18P-201ENST00000524813 RAPGEF3O95398 923 aa23.66■■□□□ 1.38
PCDHB18P-201ENST00000524813 FRAT2O75474 233 aaPredicted RBP23.64■■□□□ 1.38
PCDHB18P-201ENST00000524813 SLFN5Q08AF3 891 aa23.64■■□□□ 1.38
PCDHB18P-201ENST00000524813 PPRC1Q5VV67 1664 aaKnown RBP23.64■■□□□ 1.37
PCDHB18P-201ENST00000524813 KIF13AQ9H1H9 1805 aa23.64■■□□□ 1.37
PCDHB18P-201ENST00000524813 RICTORQ6R327 1708 aa23.63■■□□□ 1.37
PCDHB18P-201ENST00000524813 AMER1Q5JTC6 1135 aaPredicted RBP23.62■■□□□ 1.37
PCDHB18P-201ENST00000524813 DEPDC5O75140 1603 aa23.62■■□□□ 1.37
PCDHB18P-201ENST00000524813 ABCA6Q8N139 1617 aa23.62■■□□□ 1.37
PCDHB18P-201ENST00000524813 KIF3BO15066 747 aa23.6■■□□□ 1.37
PCDHB18P-201ENST00000524813 RNF17Q9BXT8 1623 aaKnown RBP23.6■■□□□ 1.37
PCDHB18P-201ENST00000524813 MLH3Q9UHC1 1453 aa23.59■■□□□ 1.37
PCDHB18P-201ENST00000524813 TRMT2AQ8IZ69 625 aaKnown RBP23.58■■□□□ 1.37
PCDHB18P-201ENST00000524813 CCDC146Q8IYE0 955 aa23.58■■□□□ 1.37
PCDHB18P-201ENST00000524813 EIF3AQ14152 1382 aaKnown RBP23.57■■□□□ 1.36
PCDHB18P-201ENST00000524813 ATP10AO60312 1499 aa23.56■■□□□ 1.36
PCDHB18P-201ENST00000524813 FRMPD1Q5SYB0 1578 aa23.56■■□□□ 1.36
PCDHB18P-201ENST00000524813 SPINK5Q9NQ38 1064 aaPredicted RBP23.56■■□□□ 1.36
PCDHB18P-201ENST00000524813 BCAR3O75815 825 aa23.55■■□□□ 1.36
PCDHB18P-201ENST00000524813 PIK3C2GO75747 1445 aa23.55■■□□□ 1.36
PCDHB18P-201ENST00000524813 MROH1Q8NDA8 1641 aa23.55■■□□□ 1.36
PCDHB18P-201ENST00000524813 NKTRP30414 1462 aaKnown RBP23.54■■□□□ 1.36
PCDHB18P-201ENST00000524813 ASXL1Q8IXJ9 1541 aa23.53■■□□□ 1.36
PCDHB18P-201ENST00000524813 DIP2CQ9Y2E4 1556 aa23.52■■□□□ 1.36
PCDHB18P-201ENST00000524813 SYNMO15061 1565 aa23.52■■□□□ 1.36
PCDHB18P-201ENST00000524813 APAF1O14727 1248 aa23.52■■□□□ 1.36
PCDHB18P-201ENST00000524813 IGHDP01880 384 aa23.52■■□□□ 1.36
PCDHB18P-201ENST00000524813 CDCA8Q53HL2 280 aa23.52■■□□□ 1.36
PCDHB18P-201ENST00000524813 USP19O94966 1318 aa23.5■■□□□ 1.35
PCDHB18P-201ENST00000524813 TET3O43151 1660 aa23.5■■□□□ 1.35
PCDHB18P-201ENST00000524813 IQGAP1P46940 1657 aa23.5■■□□□ 1.35
PCDHB18P-201ENST00000524813 KANK1Q14678 1352 aa23.5■■□□□ 1.35
PCDHB18P-201ENST00000524813 CEP152O94986 1710 aa23.49■■□□□ 1.35
PCDHB18P-201ENST00000524813 YEATS2Q9ULM3 1422 aa23.49■■□□□ 1.35
PCDHB18P-201ENST00000524813 VWDEQ8N2E2 1590 aa23.49■■□□□ 1.35
PCDHB18P-201ENST00000524813 MADDQ8WXG6 1647 aa23.48■■□□□ 1.35
PCDHB18P-201ENST00000524813 E9PSI1 815 aa23.48■■□□□ 1.35
PCDHB18P-201ENST00000524813 NPC1L1Q9UHC9 1359 aa23.46■■□□□ 1.35
PCDHB18P-201ENST00000524813 VIRMAQ69YN4 1812 aaKnown RBP23.45■■□□□ 1.34
PCDHB18P-201ENST00000524813 SCAF11Q99590 1463 aaKnown RBP23.45■■□□□ 1.34
PCDHB18P-201ENST00000524813 SPHKAPQ2M3C7 1700 aa23.45■■□□□ 1.34
PCDHB18P-201ENST00000524813 SEC24BO95487 1268 aa23.44■■□□□ 1.34
PCDHB18P-201ENST00000524813 DMRT2Q9Y5R5 561 aa23.44■■□□□ 1.34
PCDHB18P-201ENST00000524813 CGNL1Q0VF96 1302 aa23.44■■□□□ 1.34
PCDHB18P-201ENST00000524813 GGT6Q6P531 493 aa23.43■■□□□ 1.34
PCDHB18P-201ENST00000524813 MYOM1P52179 1685 aa23.42■■□□□ 1.34
PCDHB18P-201ENST00000524813 PDE3AQ14432 1141 aa23.42■■□□□ 1.34
PCDHB18P-201ENST00000524813 FAM43AQ8N2R8 423 aa23.42■■□□□ 1.34
PCDHB18P-201ENST00000524813 MAPK8IP3Q9UPT6 1336 aa23.42■■□□□ 1.34
PCDHB18P-201ENST00000524813 CLUAP1Q96AJ1 413 aa23.41■■□□□ 1.34
PCDHB18P-201ENST00000524813 BECN1Q14457 450 aa23.4■■□□□ 1.34
PCDHB18P-201ENST00000524813 POGKQ9P215 609 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms