RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 NPHP4O75161 1426 aaPredicted RBP17.72■□□□□ 0.43
CSMD1-210ENST00000521646 CPS1P31327 1500 aa17.71■□□□□ 0.43
CSMD1-210ENST00000521646 IQGAP1P46940 1657 aa17.71■□□□□ 0.42
CSMD1-210ENST00000521646 EIF2AK4Q9P2K8 1649 aaKnown RBP17.7■□□□□ 0.42
CSMD1-210ENST00000521646 RSPH4AQ5TD94 716 aa17.7■□□□□ 0.42
CSMD1-210ENST00000521646 ZC3H13Q5T200 1668 aaKnown RBP17.7■□□□□ 0.42
CSMD1-210ENST00000521646 CFAP65Q6ZU64 1925 aaKnown RBP17.69■□□□□ 0.42
CSMD1-210ENST00000521646 MYOM3Q5VTT5 1437 aa17.69■□□□□ 0.42
CSMD1-210ENST00000521646 UBR1Q8IWV7 1749 aa17.69■□□□□ 0.42
CSMD1-210ENST00000521646 PIP4K2BP78356 416 aa17.68■□□□□ 0.42
CSMD1-210ENST00000521646 MED1Q15648 1581 aaPredicted RBP17.68■□□□□ 0.42
CSMD1-210ENST00000521646 MIER1Q8N108 512 aa17.68■□□□□ 0.42
CSMD1-210ENST00000521646 MAP3K1Q13233 1512 aa17.67■□□□□ 0.42
CSMD1-210ENST00000521646 ANKLE2Q86XL3 938 aa17.67■□□□□ 0.42
CSMD1-210ENST00000521646 TSPY4P0CV99 314 aa17.66■□□□□ 0.42
CSMD1-210ENST00000521646 TSPY10P0CW01 314 aa17.66■□□□□ 0.42
CSMD1-210ENST00000521646 CROCC2H7BZ55 1655 aa17.66■□□□□ 0.42
CSMD1-210ENST00000521646 LRRC7Q96NW7 1537 aa17.66■□□□□ 0.42
CSMD1-210ENST00000521646 ABCC5O15440 1437 aa17.65■□□□□ 0.42
CSMD1-210ENST00000521646 THEMISQ8N1K5 641 aaPredicted RBP17.65■□□□□ 0.42
CSMD1-210ENST00000521646 PRDM15P57071 1507 aaPredicted RBP17.64■□□□□ 0.41
CSMD1-210ENST00000521646 PLEKHG5O94827 1062 aa17.63■□□□□ 0.41
CSMD1-210ENST00000521646 LTKP29376 864 aa17.63■□□□□ 0.41
CSMD1-210ENST00000521646 XIRP1Q702N8 1843 aaKnown RBP17.63■□□□□ 0.41
CSMD1-210ENST00000521646 DUOX2Q9NRD8 1548 aa17.62■□□□□ 0.41
CSMD1-210ENST00000521646 CD44P16070 742 aaKnown RBP17.62■□□□□ 0.41
CSMD1-210ENST00000521646 ARHGAP23Q9P227 1491 aa17.62■□□□□ 0.41
CSMD1-210ENST00000521646 PTPN23Q9H3S7 1636 aa17.61■□□□□ 0.41
CSMD1-210ENST00000521646 KIF15Q9NS87 1388 aa17.6■□□□□ 0.41
CSMD1-210ENST00000521646 PIK3C2BO00750 1634 aa17.59■□□□□ 0.41
CSMD1-210ENST00000521646 SLIT1O75093 1534 aa17.59■□□□□ 0.41
CSMD1-210ENST00000521646 PLCD3Q8N3E9 789 aa17.59■□□□□ 0.41
CSMD1-210ENST00000521646 FBXO3Q9UK99 471 aa17.58■□□□□ 0.4
CSMD1-210ENST00000521646 SCAF11Q99590 1463 aaKnown RBP17.57■□□□□ 0.4
CSMD1-210ENST00000521646 DAPK1P53355 1430 aa17.57■□□□□ 0.4
CSMD1-210ENST00000521646 ARHGAP31Q2M1Z3 1444 aa17.57■□□□□ 0.4
CSMD1-210ENST00000521646 TOM1O60784 492 aa17.57■□□□□ 0.4
CSMD1-210ENST00000521646 RRP7BPQ9NSQ0 103 aa17.57■□□□□ 0.4
CSMD1-210ENST00000521646 SYNMO15061 1565 aa17.57■□□□□ 0.4
CSMD1-210ENST00000521646 ERBINQ96RT1 1412 aa17.55■□□□□ 0.4
CSMD1-210ENST00000521646 MNX1P50219 401 aaPredicted RBP17.55■□□□□ 0.4
CSMD1-210ENST00000521646 FGD6Q6ZV73 1430 aa17.54■□□□□ 0.4
CSMD1-210ENST00000521646 LMTK2Q8IWU2 1503 aa17.51■□□□□ 0.39
CSMD1-210ENST00000521646 TXNDC2Q86VQ3 553 aa17.5■□□□□ 0.39
CSMD1-210ENST00000521646 CHIC2Q9UKJ5 165 aa17.5■□□□□ 0.39
CSMD1-210ENST00000521646 TMEM2Q9UHN6 1383 aa17.5■□□□□ 0.39
CSMD1-210ENST00000521646 TET3O43151 1660 aa17.49■□□□□ 0.39
CSMD1-210ENST00000521646 IDI1Q13907 227 aa17.48■□□□□ 0.39
CSMD1-210ENST00000521646 RGS17Q9UGC6 210 aaPredicted RBP17.48■□□□□ 0.39
CSMD1-210ENST00000521646 ZRANB1Q9UGI0 708 aa17.48■□□□□ 0.39
CSMD1-210ENST00000521646 NOS1P29475 1434 aa17.47■□□□□ 0.39
CSMD1-210ENST00000521646 RBM33Q96EV2 1170 aaKnown RBP17.47■□□□□ 0.39
CSMD1-210ENST00000521646 EFCAB6Q5THR3 1501 aa17.47■□□□□ 0.39
CSMD1-210ENST00000521646 PAK3O75914 559 aaPredicted RBP17.46■□□□□ 0.39
CSMD1-210ENST00000521646 KDM5AP29375 1690 aaKnown RBP17.45■□□□□ 0.38
CSMD1-210ENST00000521646 ADGRL2O95490 1459 aa17.44■□□□□ 0.38
CSMD1-210ENST00000521646 MYO5BQ9ULV0 1848 aa17.43■□□□□ 0.38
CSMD1-210ENST00000521646 ADGRB3O60242 1522 aa17.42■□□□□ 0.38
CSMD1-210ENST00000521646 TMEM94Q12767 1356 aa17.41■□□□□ 0.38
CSMD1-210ENST00000521646 SLC26A8Q96RN1 970 aa17.41■□□□□ 0.38
CSMD1-210ENST00000521646 ANKRD30AQ9BXX3 1397 aa17.4■□□□□ 0.38
CSMD1-210ENST00000521646 GABBR2O75899 941 aa17.4■□□□□ 0.38
CSMD1-210ENST00000521646 NWD1Q149M9 1564 aa17.4■□□□□ 0.38
CSMD1-210ENST00000521646 ZFYVE9O95405 1425 aa17.38■□□□□ 0.37
CSMD1-210ENST00000521646 ZBTB47Q9UFB7 747 aaPredicted RBP17.38■□□□□ 0.37
CSMD1-210ENST00000521646 ROBO1Q9Y6N7 1651 aa17.38■□□□□ 0.37
CSMD1-210ENST00000521646 KANK1Q14678 1352 aa17.37■□□□□ 0.37
CSMD1-210ENST00000521646 FAM135BQ49AJ0 1406 aa17.37■□□□□ 0.37
CSMD1-210ENST00000521646 GCC2Q8IWJ2 1684 aa17.36■□□□□ 0.37
CSMD1-210ENST00000521646 EID1Q9Y6B2 187 aa17.36■□□□□ 0.37
CSMD1-210ENST00000521646 TMEM131LA2VDJ0 1609 aa17.36■□□□□ 0.37
CSMD1-210ENST00000521646 KCNA6P17658 529 aa17.35■□□□□ 0.37
CSMD1-210ENST00000521646 ANKRD50Q9ULJ7 1429 aa17.34■□□□□ 0.37
CSMD1-210ENST00000521646 TSPYL2Q9H2G4 693 aaPredicted RBP17.33■□□□□ 0.36
CSMD1-210ENST00000521646 UNC13BO14795 1591 aa17.32■□□□□ 0.36
CSMD1-210ENST00000521646 CHD2O14647 1828 aaKnown RBP17.32■□□□□ 0.36
CSMD1-210ENST00000521646 E9PCH4 1651 aa17.32■□□□□ 0.36
CSMD1-210ENST00000521646 POTEAQ6S8J7 498 aa17.31■□□□□ 0.36
CSMD1-210ENST00000521646 ZNF579Q8NAF0 562 aaKnown RBP17.31■□□□□ 0.36
CSMD1-210ENST00000521646 NKTRP30414 1462 aaKnown RBP17.31■□□□□ 0.36
CSMD1-210ENST00000521646 VASPP50552 380 aaPredicted RBP17.3■□□□□ 0.36
CSMD1-210ENST00000521646 FAM50AQ14320 339 aaKnown RBP17.3■□□□□ 0.36
CSMD1-210ENST00000521646 PROSER2Q86WR7 435 aaPredicted RBP17.3■□□□□ 0.36
CSMD1-210ENST00000521646 RPRD2Q5VT52 1461 aaKnown RBP17.3■□□□□ 0.36
CSMD1-210ENST00000521646 RIMS2Q9UQ26 1411 aa17.3■□□□□ 0.36
CSMD1-210ENST00000521646 ADAMTS13Q76LX8 1427 aa17.29■□□□□ 0.36
CSMD1-210ENST00000521646 PLEKHG1Q9ULL1 1385 aa17.28■□□□□ 0.36
CSMD1-210ENST00000521646 CLCN6P51797 869 aa17.27■□□□□ 0.36
CSMD1-210ENST00000521646 NUTM2DQ5VT03 806 aaPredicted RBP17.27■□□□□ 0.36
CSMD1-210ENST00000521646 SLC52A1Q9NWF4 448 aa17.27■□□□□ 0.36
CSMD1-210ENST00000521646 COL16A1Q07092 1604 aaPredicted RBP17.25■□□□□ 0.35
CSMD1-210ENST00000521646 SETD1AO15047 1707 aaKnown RBP17.25■□□□□ 0.35
CSMD1-210ENST00000521646 KLHL34Q8N239 644 aa17.25■□□□□ 0.35
CSMD1-210ENST00000521646 PHLPP1O60346 1717 aa17.24■□□□□ 0.35
CSMD1-210ENST00000521646 PTPRUQ92729 1446 aa17.24■□□□□ 0.35
CSMD1-210ENST00000521646 IQGAP3Q86VI3 1631 aa17.24■□□□□ 0.35
CSMD1-210ENST00000521646 LRP6O75581 1613 aa17.23■□□□□ 0.35
CSMD1-210ENST00000521646 PHF12Q96QT6 1004 aa17.23■□□□□ 0.35
CSMD1-210ENST00000521646 NRXN3Q9Y4C0 1643 aa17.22■□□□□ 0.35
CSMD1-210ENST00000521646 SLAIN2Q9P270 581 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms