RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 EID1Q9Y6B2 187 aa8.25□□□□□ -1.09
CTNNA1-220ENST00000520260 PTPRKQ15262 1439 aa8.25□□□□□ -1.09
CTNNA1-220ENST00000520260 A2ML1A8K2U0 1454 aa8.25□□□□□ -1.09
CTNNA1-220ENST00000520260 VWDEQ8N2E2 1590 aa8.24□□□□□ -1.09
CTNNA1-220ENST00000520260 PKD2Q13563 968 aa8.24□□□□□ -1.09
CTNNA1-220ENST00000520260 ERVK-7P63135 1459 aa8.24□□□□□ -1.09
CTNNA1-220ENST00000520260 SIGLEC1Q9BZZ2 1709 aa8.23□□□□□ -1.09
CTNNA1-220ENST00000520260 SPATA31D1Q6ZQQ2 1576 aa8.23□□□□□ -1.09
CTNNA1-220ENST00000520260 MROH1Q8NDA8 1641 aa8.23□□□□□ -1.09
CTNNA1-220ENST00000520260 MYO3AQ8NEV4 1616 aa8.23□□□□□ -1.09
CTNNA1-220ENST00000520260 MYT1Q01538 1121 aa8.23□□□□□ -1.09
CTNNA1-220ENST00000520260 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.23□□□□□ -1.09
CTNNA1-220ENST00000520260 ZNF142P52746 1687 aaPredicted RBP8.23□□□□□ -1.09
CTNNA1-220ENST00000520260 CEP152O94986 1710 aa8.23□□□□□ -1.09
CTNNA1-220ENST00000520260 CEP170BQ9Y4F5 1589 aaPredicted RBP8.22□□□□□ -1.09
CTNNA1-220ENST00000520260 PLA2R1Q13018 1463 aa8.22□□□□□ -1.09
CTNNA1-220ENST00000520260 CEBPAP49715 358 aaPredicted RBP8.22□□□□□ -1.09
CTNNA1-220ENST00000520260 ATF5Q9Y2D1 282 aaPredicted RBP8.22□□□□□ -1.09
CTNNA1-220ENST00000520260 UGGT1Q9NYU2 1555 aa8.22□□□□□ -1.09
CTNNA1-220ENST00000520260 KDM5AP29375 1690 aaKnown RBP8.21□□□□□ -1.09
CTNNA1-220ENST00000520260 PPP1R15AO75807 674 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-220ENST00000520260 ANKLE2Q86XL3 938 aa8.21□□□□□ -1.1
CTNNA1-220ENST00000520260 PCDH10Q9P2E7 1040 aa8.21□□□□□ -1.1
CTNNA1-220ENST00000520260 CLEC11AQ9Y240 323 aa8.21□□□□□ -1.1
CTNNA1-220ENST00000520260 CCDC144AA2RUR9 1427 aa8.2□□□□□ -1.1
CTNNA1-220ENST00000520260 LMTK3Q96Q04 1460 aa8.2□□□□□ -1.1
CTNNA1-220ENST00000520260 RAB3GAP2Q9H2M9 1393 aa8.2□□□□□ -1.1
CTNNA1-220ENST00000520260 NOS1P29475 1434 aa8.19□□□□□ -1.1
CTNNA1-220ENST00000520260 CHGAP10645 457 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-220ENST00000520260 CHADLQ6NUI6 762 aa8.18□□□□□ -1.1
CTNNA1-220ENST00000520260 STAC3Q96MF2 364 aa8.18□□□□□ -1.1
CTNNA1-220ENST00000520260 MPHOSPH9Q99550 1183 aa8.18□□□□□ -1.1
CTNNA1-220ENST00000520260 ADGRB3O60242 1522 aa8.18□□□□□ -1.1
CTNNA1-220ENST00000520260 TRPM2O94759 1503 aa8.18□□□□□ -1.1
CTNNA1-220ENST00000520260 ZNF326Q5BKZ1 582 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-220ENST00000520260 FBXO31Q5XUX0 539 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-220ENST00000520260 BCANQ96GW7 911 aa8.17□□□□□ -1.1
CTNNA1-220ENST00000520260 RPGRIP1LQ68CZ1 1315 aa8.17□□□□□ -1.1
CTNNA1-220ENST00000520260 SPHKAPQ2M3C7 1700 aa8.17□□□□□ -1.1
CTNNA1-220ENST00000520260 PTPRTO14522 1441 aa8.16□□□□□ -1.1
CTNNA1-220ENST00000520260 E9PCH4 1651 aa8.15□□□□□ -1.1
CTNNA1-220ENST00000520260 SCAF11Q99590 1463 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-220ENST00000520260 VGFO15240 615 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-220ENST00000520260 SPDYE1Q8NFV5 336 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-220ENST00000520260 TMEM2Q9UHN6 1383 aa8.14□□□□□ -1.11
CTNNA1-220ENST00000520260 POTEB2H3BUK9 544 aa8.14□□□□□ -1.11
CTNNA1-220ENST00000520260 TXNDC2Q86VQ3 553 aa8.14□□□□□ -1.11
CTNNA1-220ENST00000520260 POLR1AO95602 1720 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-220ENST00000520260 SLIT1O75093 1534 aa8.13□□□□□ -1.11
CTNNA1-220ENST00000520260 ANKRD30BQ9BXX2 1392 aa8.13□□□□□ -1.11
CTNNA1-220ENST00000520260 HSPA2P54652 639 aa8.13□□□□□ -1.11
CTNNA1-220ENST00000520260 IDI1Q13907 227 aa8.13□□□□□ -1.11
CTNNA1-220ENST00000520260 DCBLD2Q96PD2 775 aa8.13□□□□□ -1.11
CTNNA1-220ENST00000520260 PIK3C2BO00750 1634 aa8.13□□□□□ -1.11
CTNNA1-220ENST00000520260 SYNMO15061 1565 aa8.13□□□□□ -1.11
CTNNA1-220ENST00000520260 KIF1BO60333 1816 aa8.13□□□□□ -1.11
CTNNA1-220ENST00000520260 NPHP4O75161 1426 aaPredicted RBP8.12□□□□□ -1.11
CTNNA1-220ENST00000520260 UBR1Q8IWV7 1749 aa8.12□□□□□ -1.11
CTNNA1-220ENST00000520260 NEURL4Q96JN8 1562 aa8.12□□□□□ -1.11
CTNNA1-220ENST00000520260 MED14O60244 1454 aa8.12□□□□□ -1.11
CTNNA1-220ENST00000520260 DIP2AQ14689 1571 aa8.11□□□□□ -1.11
CTNNA1-220ENST00000520260 ARHGAP23Q9P227 1491 aa8.11□□□□□ -1.11
CTNNA1-220ENST00000520260 RIMS2Q9UQ26 1411 aa8.11□□□□□ -1.11
CTNNA1-220ENST00000520260 PLEKHG1Q9ULL1 1385 aa8.1□□□□□ -1.11
CTNNA1-220ENST00000520260 CLSPNQ9HAW4 1339 aa8.1□□□□□ -1.11
CTNNA1-220ENST00000520260 SPDYE2BA6NHP3 402 aa8.1□□□□□ -1.11
CTNNA1-220ENST00000520260 SPDYE6P0CI01 402 aa8.1□□□□□ -1.11
CTNNA1-220ENST00000520260 CD44P16070 742 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-220ENST00000520260 SPDYE2Q495Y8 402 aa8.1□□□□□ -1.11
CTNNA1-220ENST00000520260 IQGAP1P46940 1657 aa8.1□□□□□ -1.11
CTNNA1-220ENST00000520260 PIK3R4Q99570 1358 aa8.1□□□□□ -1.11
CTNNA1-220ENST00000520260 CFAP65Q6ZU64 1925 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-220ENST00000520260 CPS1P31327 1500 aa8.09□□□□□ -1.11
CTNNA1-220ENST00000520260 TMEM131LA2VDJ0 1609 aa8.09□□□□□ -1.11
CTNNA1-220ENST00000520260 IQSEC2Q5JU85 1478 aa8.08□□□□□ -1.12
CTNNA1-220ENST00000520260 CLCN6P51797 869 aa8.08□□□□□ -1.12
CTNNA1-220ENST00000520260 ZFYVE9O95405 1425 aa8.08□□□□□ -1.12
CTNNA1-220ENST00000520260 CLTCL1P53675 1640 aa8.07□□□□□ -1.12
CTNNA1-220ENST00000520260 NCKAP5LQ9HCH0 1330 aa8.07□□□□□ -1.12
CTNNA1-220ENST00000520260 TBX22Q9Y458 520 aa8.06□□□□□ -1.12
CTNNA1-220ENST00000520260 TONSLQ96HA7 1378 aa8.06□□□□□ -1.12
CTNNA1-220ENST00000520260 NKTRP30414 1462 aaKnown RBP8.06□□□□□ -1.12
CTNNA1-220ENST00000520260 LAMC1P11047 1609 aa8.05□□□□□ -1.12
CTNNA1-220ENST00000520260 TIMELESSQ9UNS1 1208 aa8.05□□□□□ -1.12
CTNNA1-220ENST00000520260 MYOM2P54296 1465 aa8.05□□□□□ -1.12
CTNNA1-220ENST00000520260 RGL3Q3MIN7 710 aa8.04□□□□□ -1.12
CTNNA1-220ENST00000520260 C14orf37Q86TY3 774 aa8.04□□□□□ -1.12
CTNNA1-220ENST00000520260 SETBP1Q9Y6X0 1596 aa8.04□□□□□ -1.12
CTNNA1-220ENST00000520260 STRCQ7RTU9 1775 aa8.04□□□□□ -1.12
CTNNA1-220ENST00000520260 NCOA3Q9Y6Q9 1424 aa8.03□□□□□ -1.12
CTNNA1-220ENST00000520260 SLC24A1O60721 1099 aa8.03□□□□□ -1.12
CTNNA1-220ENST00000520260 TOM1O60784 492 aa8.03□□□□□ -1.12
CTNNA1-220ENST00000520260 KCNA6P17658 529 aa8.03□□□□□ -1.12
CTNNA1-220ENST00000520260 CCER1Q8TC90 406 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-220ENST00000520260 NEXMIFQ5QGS0 1516 aa8.03□□□□□ -1.12
CTNNA1-220ENST00000520260 MSH6P52701 1360 aa8.02□□□□□ -1.13
CTNNA1-220ENST00000520260 LTKP29376 864 aa8.02□□□□□ -1.13
CTNNA1-220ENST00000520260 LCE2DQ5TA82 110 aaPredicted RBP8.02□□□□□ -1.13
CTNNA1-220ENST00000520260 DCAF11Q8TEB1 546 aa8.02□□□□□ -1.13
CTNNA1-220ENST00000520260 SPATA31E1Q6ZUB1 1445 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms