RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 CASKIN1Q8WXD9 1431 aa8.1□□□□□ -1.11
SDCBP-207ENST00000520168 TNRQ92752 1358 aa8.1□□□□□ -1.11
SDCBP-207ENST00000520168 LRRC7Q96NW7 1537 aa8.09□□□□□ -1.11
SDCBP-207ENST00000520168 ATN1P54259 1190 aaPredicted RBP8.09□□□□□ -1.11
SDCBP-207ENST00000520168 GGT6Q6P531 493 aa8.09□□□□□ -1.11
SDCBP-207ENST00000520168 THEMISQ8N1K5 641 aaPredicted RBP8.09□□□□□ -1.11
SDCBP-207ENST00000520168 XIRP1Q702N8 1843 aaKnown RBP8.08□□□□□ -1.12
SDCBP-207ENST00000520168 FYCO1Q9BQS8 1478 aa8.08□□□□□ -1.12
SDCBP-207ENST00000520168 RTEL1-TNFRSF6BF6WH68 1400 aa8.08□□□□□ -1.12
SDCBP-207ENST00000520168 GPATCH8Q9UKJ3 1502 aaKnown RBP8.08□□□□□ -1.12
SDCBP-207ENST00000520168 RASEFQ8IZ41 740 aa8.07□□□□□ -1.12
SDCBP-207ENST00000520168 SETD1AO15047 1707 aaKnown RBP8.06□□□□□ -1.12
SDCBP-207ENST00000520168 MAP3K13O43283 966 aa8.06□□□□□ -1.12
SDCBP-207ENST00000520168 POTEJP0CG39 1038 aa8.06□□□□□ -1.12
SDCBP-207ENST00000520168 TIE1P35590 1138 aa8.06□□□□□ -1.12
SDCBP-207ENST00000520168 PLCD3Q8N3E9 789 aa8.06□□□□□ -1.12
SDCBP-207ENST00000520168 BMP2KQ9NSY1 1161 aaPredicted RBP8.06□□□□□ -1.12
SDCBP-207ENST00000520168 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.06□□□□□ -1.12
SDCBP-207ENST00000520168 MIA2Q96PC5 1412 aa8.05□□□□□ -1.12
SDCBP-207ENST00000520168 POTEMA6NI47 508 aa8.05□□□□□ -1.12
SDCBP-207ENST00000520168 UBTFP17480 764 aaKnown RBP8.05□□□□□ -1.12
SDCBP-207ENST00000520168 ZBTB47Q9UFB7 747 aaPredicted RBP8.05□□□□□ -1.12
SDCBP-207ENST00000520168 RGS17Q9UGC6 210 aaPredicted RBP8.05□□□□□ -1.12
SDCBP-207ENST00000520168 ZNF777Q9ULD5 760 aaPredicted RBP8.05□□□□□ -1.12
SDCBP-207ENST00000520168 UBR1Q8IWV7 1749 aa8.05□□□□□ -1.12
SDCBP-207ENST00000520168 DHX29Q7Z478 1369 aaKnown RBP8.05□□□□□ -1.12
SDCBP-207ENST00000520168 SRCAPQ6ZRS2 3230 aa8.04□□□□□ -1.12
SDCBP-207ENST00000520168 HNRNPMP52272 730 aaKnown RBP eCLIP8.04□□□□□ -1.12
SDCBP-207ENST00000520168 ROBO1Q9Y6N7 1651 aa8.04□□□□□ -1.12
SDCBP-207ENST00000520168 FAM135BQ49AJ0 1406 aa8.03□□□□□ -1.12
SDCBP-207ENST00000520168 LRRC9Q6ZRR7 1453 aa8.03□□□□□ -1.12
SDCBP-207ENST00000520168 CCNB3Q8WWL7 1395 aa8.03□□□□□ -1.12
SDCBP-207ENST00000520168 SGIP1Q9BQI5 828 aa8.03□□□□□ -1.12
SDCBP-207ENST00000520168 SCUBE2Q9NQ36 999 aa8.03□□□□□ -1.12
SDCBP-207ENST00000520168 CFDP1Q9UEE9 299 aaPredicted RBP8.03□□□□□ -1.12
SDCBP-207ENST00000520168 TRPC6Q9Y210 931 aa8.03□□□□□ -1.12
SDCBP-207ENST00000520168 EIF2AK4Q9P2K8 1649 aaKnown RBP8.03□□□□□ -1.12
SDCBP-207ENST00000520168 KDM5AP29375 1690 aaKnown RBP8.02□□□□□ -1.13
SDCBP-207ENST00000520168 POTEGQ6S5H5 508 aa8.02□□□□□ -1.13
SDCBP-207ENST00000520168 WASHC2CQ9Y4E1 1318 aa8.02□□□□□ -1.13
SDCBP-207ENST00000520168 TIAM1Q13009 1591 aa8.01□□□□□ -1.13
SDCBP-207ENST00000520168 SCAF11Q99590 1463 aaKnown RBP8.01□□□□□ -1.13
SDCBP-207ENST00000520168 MBD5Q9P267 1494 aa8.01□□□□□ -1.13
SDCBP-207ENST00000520168 PHLPP1O60346 1717 aa8.01□□□□□ -1.13
SDCBP-207ENST00000520168 CCDC141Q6ZP82 1450 aa8□□□□□ -1.13
SDCBP-207ENST00000520168 SLIT1O75093 1534 aa8□□□□□ -1.13
SDCBP-207ENST00000520168 EHBP1L1Q8N3D4 1523 aa8□□□□□ -1.13
SDCBP-207ENST00000520168 POTEAQ6S8J7 498 aa8□□□□□ -1.13
SDCBP-207ENST00000520168 POTEFA5A3E0 1075 aa7.99□□□□□ -1.13
SDCBP-207ENST00000520168 TTLL13PA6NNM8 815 aa7.99□□□□□ -1.13
SDCBP-207ENST00000520168 KIF3BO15066 747 aa7.99□□□□□ -1.13
SDCBP-207ENST00000520168 RSPH4AQ5TD94 716 aa7.99□□□□□ -1.13
SDCBP-207ENST00000520168 FBXO31Q5XUX0 539 aaPredicted RBP7.99□□□□□ -1.13
SDCBP-207ENST00000520168 PCDH10Q9P2E7 1040 aa7.99□□□□□ -1.13
SDCBP-207ENST00000520168 CFAP65Q6ZU64 1925 aaKnown RBP7.99□□□□□ -1.13
SDCBP-207ENST00000520168 ARHGAP23Q9P227 1491 aa7.99□□□□□ -1.13
SDCBP-207ENST00000520168 ABCC3O15438 1527 aa7.98□□□□□ -1.13
SDCBP-207ENST00000520168 CEP152O94986 1710 aa7.98□□□□□ -1.13
SDCBP-207ENST00000520168 ARHGEF5Q12774 1597 aa7.98□□□□□ -1.13
SDCBP-207ENST00000520168 NUBP1P53384 320 aa7.98□□□□□ -1.13
SDCBP-207ENST00000520168 ERVK-7P63135 1459 aa7.98□□□□□ -1.13
SDCBP-207ENST00000520168 CAMSAP2Q08AD1 1489 aa7.98□□□□□ -1.13
SDCBP-207ENST00000520168 MTUS2Q5JR59 1369 aa7.97□□□□□ -1.13
SDCBP-207ENST00000520168 PCDHB13Q9Y5F0 798 aa7.97□□□□□ -1.13
SDCBP-207ENST00000520168 SHPRHQ149N8 1683 aa7.96□□□□□ -1.13
SDCBP-207ENST00000520168 NKTRP30414 1462 aaKnown RBP7.96□□□□□ -1.13
SDCBP-207ENST00000520168 SEC24BO95487 1268 aa7.96□□□□□ -1.14
SDCBP-207ENST00000520168 IER5LQ5T953 404 aa7.96□□□□□ -1.14
SDCBP-207ENST00000520168 MAP3K1Q13233 1512 aa7.96□□□□□ -1.14
SDCBP-207ENST00000520168 NWD1Q149M9 1564 aa7.96□□□□□ -1.14
SDCBP-207ENST00000520168 MAST1Q9Y2H9 1570 aa7.96□□□□□ -1.14
SDCBP-207ENST00000520168 JCADQ9P266 1359 aa7.96□□□□□ -1.14
SDCBP-207ENST00000520168 CDK12Q9NYV4 1490 aaPredicted RBP7.95□□□□□ -1.14
SDCBP-207ENST00000520168 FAM212AQ96EL1 285 aa7.95□□□□□ -1.14
SDCBP-207ENST00000520168 COL16A1Q07092 1604 aaPredicted RBP7.95□□□□□ -1.14
SDCBP-207ENST00000520168 CEP162Q5TB80 1403 aa7.95□□□□□ -1.14
SDCBP-207ENST00000520168 FGD6Q6ZV73 1430 aa7.95□□□□□ -1.14
SDCBP-207ENST00000520168 NCOA2Q15596 1464 aa7.94□□□□□ -1.14
SDCBP-207ENST00000520168 PRDM15P57071 1507 aaPredicted RBP7.94□□□□□ -1.14
SDCBP-207ENST00000520168 PIK3C2BO00750 1634 aa7.94□□□□□ -1.14
SDCBP-207ENST00000520168 MROH1Q8NDA8 1641 aa7.94□□□□□ -1.14
SDCBP-207ENST00000520168 FKBP8Q14318 412 aa7.94□□□□□ -1.14
SDCBP-207ENST00000520168 ZNF772Q68DY9 489 aaPredicted RBP7.94□□□□□ -1.14
SDCBP-207ENST00000520168 UPF1Q92900 1129 aaKnown RBP eCLIP7.94□□□□□ -1.14
SDCBP-207ENST00000520168 TRIM35Q9UPQ4 493 aa7.94□□□□□ -1.14
SDCBP-207ENST00000520168 EID1Q9Y6B2 187 aa7.94□□□□□ -1.14
SDCBP-207ENST00000520168 FAM163AQ96GL9 167 aaPredicted RBP7.93□□□□□ -1.14
SDCBP-207ENST00000520168 COLQQ9Y215 455 aaPredicted RBP7.93□□□□□ -1.14
SDCBP-207ENST00000520168 SPATA31A6Q5VVP1 1343 aa7.93□□□□□ -1.14
SDCBP-207ENST00000520168 TMEM94Q12767 1356 aa7.93□□□□□ -1.14
SDCBP-207ENST00000520168 CHD2O14647 1828 aaKnown RBP7.92□□□□□ -1.14
SDCBP-207ENST00000520168 TXNDC2Q86VQ3 553 aa7.92□□□□□ -1.14
SDCBP-207ENST00000520168 IFNL1Q8IU54 200 aa7.92□□□□□ -1.14
SDCBP-207ENST00000520168 MSH6P52701 1360 aa7.92□□□□□ -1.14
SDCBP-207ENST00000520168 ARHGAP31Q2M1Z3 1444 aa7.92□□□□□ -1.14
SDCBP-207ENST00000520168 TSPY4P0CV99 314 aa7.91□□□□□ -1.14
SDCBP-207ENST00000520168 TSPY10P0CW01 314 aa7.91□□□□□ -1.14
SDCBP-207ENST00000520168 LCE2DQ5TA82 110 aaPredicted RBP7.91□□□□□ -1.14
SDCBP-207ENST00000520168 ZNF644Q9H582 1327 aaPredicted RBP7.91□□□□□ -1.14
SDCBP-207ENST00000520168 EFCAB6Q5THR3 1501 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms