RNA–Protein interactions for RNA: ENST00000519060.6

MSR1-210, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5

Gene MSR1, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-210ENST00000519060 PLXNC1O60486 1568 aa14.96□□□□□ -0.01
MSR1-210ENST00000519060 ZFP91Q96JP5 570 aaPredicted RBP14.96□□□□□ -0.01
MSR1-210ENST00000519060 CLTCQ00610 1675 aaKnown RBP14.96□□□□□ -0.01
MSR1-210ENST00000519060 INO80Q9ULG1 1556 aaPredicted RBP14.95□□□□□ -0.02
MSR1-210ENST00000519060 RTEL1-TNFRSF6BF6WH68 1400 aa14.95□□□□□ -0.02
MSR1-210ENST00000519060 TIE1P35590 1138 aa14.95□□□□□ -0.02
MSR1-210ENST00000519060 PLA2R1Q13018 1463 aa14.95□□□□□ -0.02
MSR1-210ENST00000519060 TCOF1Q13428 1488 aaKnown RBP14.95□□□□□ -0.02
MSR1-210ENST00000519060 RSPH4AQ5TD94 716 aa14.93□□□□□ -0.02
MSR1-210ENST00000519060 CEP170BQ9Y4F5 1589 aaPredicted RBP14.92□□□□□ -0.02
MSR1-210ENST00000519060 CEP162Q5TB80 1403 aa14.92□□□□□ -0.02
MSR1-210ENST00000519060 WASHC2CQ9Y4E1 1318 aa14.92□□□□□ -0.02
MSR1-210ENST00000519060 A2ML1A8K2U0 1454 aa14.91□□□□□ -0.02
MSR1-210ENST00000519060 TMEM106CQ9BVX2 250 aa14.91□□□□□ -0.02
MSR1-210ENST00000519060 TNRQ92752 1358 aa14.9□□□□□ -0.02
MSR1-210ENST00000519060 STK25O00506 426 aa14.9□□□□□ -0.02
MSR1-210ENST00000519060 CHGAP10645 457 aaKnown RBP14.9□□□□□ -0.02
MSR1-210ENST00000519060 ANKLE2Q86XL3 938 aa14.9□□□□□ -0.02
MSR1-210ENST00000519060 BMP2KQ9NSY1 1161 aaPredicted RBP14.9□□□□□ -0.02
MSR1-210ENST00000519060 TIAM1Q13009 1591 aa14.9□□□□□ -0.02
MSR1-210ENST00000519060 THEMISQ8N1K5 641 aaPredicted RBP14.89□□□□□ -0.03
MSR1-210ENST00000519060 DCBLD2Q96PD2 775 aa14.89□□□□□ -0.03
MSR1-210ENST00000519060 MYO3AQ8NEV4 1616 aa14.88□□□□□ -0.03
MSR1-210ENST00000519060 TTLL13PA6NNM8 815 aa14.88□□□□□ -0.03
MSR1-210ENST00000519060 TSPY4P0CV99 314 aa14.88□□□□□ -0.03
MSR1-210ENST00000519060 TSPY10P0CW01 314 aa14.88□□□□□ -0.03
MSR1-210ENST00000519060 PIP4K2BP78356 416 aa14.88□□□□□ -0.03
MSR1-210ENST00000519060 HS6ST3Q8IZP7 471 aa14.88□□□□□ -0.03
MSR1-210ENST00000519060 SPATA31D1Q6ZQQ2 1576 aa14.88□□□□□ -0.03
MSR1-210ENST00000519060 ADGBQ8N7X0 1667 aa14.87□□□□□ -0.03
MSR1-210ENST00000519060 HSPA1LP34931 641 aa14.87□□□□□ -0.03
MSR1-210ENST00000519060 BCL11BQ9C0K0 894 aaPredicted RBP14.87□□□□□ -0.03
MSR1-210ENST00000519060 DNMT1P26358 1616 aaKnown RBP14.87□□□□□ -0.03
MSR1-210ENST00000519060 ZNF142P52746 1687 aaPredicted RBP14.87□□□□□ -0.03
MSR1-210ENST00000519060 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.86□□□□□ -0.03
MSR1-210ENST00000519060 MIA2Q96PC5 1412 aa14.86□□□□□ -0.03
MSR1-210ENST00000519060 TOM1O60784 492 aa14.86□□□□□ -0.03
MSR1-210ENST00000519060 STK24Q9Y6E0 443 aa14.86□□□□□ -0.03
MSR1-210ENST00000519060 EHBP1L1Q8N3D4 1523 aa14.86□□□□□ -0.03
MSR1-210ENST00000519060 NCOA2Q15596 1464 aa14.85□□□□□ -0.03
MSR1-210ENST00000519060 ASTLQ6HA08 431 aaPredicted RBP14.85□□□□□ -0.03
MSR1-210ENST00000519060 CCDC141Q6ZP82 1450 aa14.84□□□□□ -0.03
MSR1-210ENST00000519060 ATMINO43313 823 aaPredicted RBP14.84□□□□□ -0.03
MSR1-210ENST00000519060 PZPP20742 1482 aa14.83□□□□□ -0.03
MSR1-210ENST00000519060 SHANK2Q9UPX8 1470 aa14.82□□□□□ -0.04
MSR1-210ENST00000519060 CAMSAP2Q08AD1 1489 aa14.82□□□□□ -0.04
MSR1-210ENST00000519060 LOC105371045A0A1W2PR82 267 aa14.81□□□□□ -0.04
MSR1-210ENST00000519060 ATN1P54259 1190 aaPredicted RBP14.81□□□□□ -0.04
MSR1-210ENST00000519060 POTEIP0CG38 1075 aa14.8□□□□□ -0.04
MSR1-210ENST00000519060 KANK4Q5T7N3 995 aaPredicted RBP14.8□□□□□ -0.04
MSR1-210ENST00000519060 KDM5DQ9BY66 1539 aa14.79□□□□□ -0.04
MSR1-210ENST00000519060 CABP2Q9NPB3 220 aa14.79□□□□□ -0.04
MSR1-210ENST00000519060 NEURL4Q96JN8 1562 aa14.78□□□□□ -0.04
MSR1-210ENST00000519060 NPHP4O75161 1426 aaPredicted RBP14.78□□□□□ -0.04
MSR1-210ENST00000519060 TRIM35Q9UPQ4 493 aa14.78□□□□□ -0.04
MSR1-210ENST00000519060 CPS1P31327 1500 aa14.77□□□□□ -0.04
MSR1-210ENST00000519060 NLRP1Q9C000 1473 aa14.77□□□□□ -0.04
MSR1-210ENST00000519060 MED14O60244 1454 aa14.76□□□□□ -0.05
MSR1-210ENST00000519060 GOLGA2Q08379 1002 aa14.76□□□□□ -0.05
MSR1-210ENST00000519060 UGGT1Q9NYU2 1555 aa14.76□□□□□ -0.05
MSR1-210ENST00000519060 FAM135AQ9P2D6 1515 aa14.76□□□□□ -0.05
MSR1-210ENST00000519060 ARHGEF5Q12774 1597 aa14.74□□□□□ -0.05
MSR1-210ENST00000519060 VWDEQ8N2E2 1590 aa14.74□□□□□ -0.05
MSR1-210ENST00000519060 BBXQ8WY36 941 aaPredicted RBP14.74□□□□□ -0.05
MSR1-210ENST00000519060 LRRC9Q6ZRR7 1453 aa14.74□□□□□ -0.05
MSR1-210ENST00000519060 LTKP29376 864 aa14.73□□□□□ -0.05
MSR1-210ENST00000519060 PELP1Q8IZL8 1130 aaKnown RBP14.73□□□□□ -0.05
MSR1-210ENST00000519060 TXNDC2Q86VQ3 553 aa14.72□□□□□ -0.05
MSR1-210ENST00000519060 EFCAB3Q8N7B9 438 aa14.72□□□□□ -0.05
MSR1-210ENST00000519060 POLR1AO95602 1720 aaPredicted RBP14.72□□□□□ -0.05
MSR1-210ENST00000519060 MKRN3Q13064 507 aaKnown RBP14.71□□□□□ -0.05
MSR1-210ENST00000519060 ABCC3O15438 1527 aa14.71□□□□□ -0.06
MSR1-210ENST00000519060 VPS8Q8N3P4 1428 aa14.7□□□□□ -0.06
MSR1-210ENST00000519060 RRP7BPQ9NSQ0 103 aa14.7□□□□□ -0.06
MSR1-210ENST00000519060 DEPDC5O75140 1603 aa14.7□□□□□ -0.06
MSR1-210ENST00000519060 ALKQ9UM73 1620 aa14.69□□□□□ -0.06
MSR1-210ENST00000519060 ERVK-7P63135 1459 aa14.69□□□□□ -0.06
MSR1-210ENST00000519060 LRRC7Q96NW7 1537 aa14.68□□□□□ -0.06
MSR1-210ENST00000519060 MYOM3Q5VTT5 1437 aa14.67□□□□□ -0.06
MSR1-210ENST00000519060 CFAP65Q6ZU64 1925 aaKnown RBP14.67□□□□□ -0.06
MSR1-210ENST00000519060 SOX12O15370 315 aa14.67□□□□□ -0.06
MSR1-210ENST00000519060 MED1Q15648 1581 aaPredicted RBP14.67□□□□□ -0.06
MSR1-210ENST00000519060 MAST1Q9Y2H9 1570 aa14.67□□□□□ -0.06
MSR1-210ENST00000519060 RNF17Q9BXT8 1623 aaKnown RBP14.66□□□□□ -0.06
MSR1-210ENST00000519060 NKX1-1Q15270 411 aaPredicted RBP14.66□□□□□ -0.06
MSR1-210ENST00000519060 IER5LQ5T953 404 aa14.66□□□□□ -0.06
MSR1-210ENST00000519060 SLC39A7Q92504 469 aa14.66□□□□□ -0.06
MSR1-210ENST00000519060 EID1Q9Y6B2 187 aa14.66□□□□□ -0.06
MSR1-210ENST00000519060 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.64□□□□□ -0.07
MSR1-210ENST00000519060 STRCP1A6NGW2 1772 aa14.64□□□□□ -0.07
MSR1-210ENST00000519060 IQGAP1P46940 1657 aa14.64□□□□□ -0.07
MSR1-210ENST00000519060 SCAF11Q99590 1463 aaKnown RBP14.63□□□□□ -0.07
MSR1-210ENST00000519060 MROH1Q8NDA8 1641 aa14.63□□□□□ -0.07
MSR1-210ENST00000519060 KIF15Q9NS87 1388 aa14.63□□□□□ -0.07
MSR1-210ENST00000519060 MAP3K1Q13233 1512 aa14.63□□□□□ -0.07
MSR1-210ENST00000519060 DUOX2Q9NRD8 1548 aa14.63□□□□□ -0.07
MSR1-210ENST00000519060 IDI1Q13907 227 aa14.63□□□□□ -0.07
MSR1-210ENST00000519060 ABCC5O15440 1437 aa14.63□□□□□ -0.07
MSR1-210ENST00000519060 ARHGAP31Q2M1Z3 1444 aa14.63□□□□□ -0.07
MSR1-210ENST00000519060 C7P10643 843 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms