RNA–Protein interactions for RNA: ENST00000518447.1

SCUBE2-203, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 462 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-203ENST00000518447 PIP4K2BP78356 416 aa9.66□□□□□ -0.86
SCUBE2-203ENST00000518447 ZC3H13Q5T200 1668 aaKnown RBP9.66□□□□□ -0.86
SCUBE2-203ENST00000518447 UGGT1Q9NYU2 1555 aa9.66□□□□□ -0.86
SCUBE2-203ENST00000518447 XIRP1Q702N8 1843 aaKnown RBP9.65□□□□□ -0.86
SCUBE2-203ENST00000518447 SHANK2Q9UPX8 1470 aa9.65□□□□□ -0.87
SCUBE2-203ENST00000518447 DEPDC5O75140 1603 aa9.64□□□□□ -0.87
SCUBE2-203ENST00000518447 MAST1Q9Y2H9 1570 aa9.64□□□□□ -0.87
SCUBE2-203ENST00000518447 LRRC9Q6ZRR7 1453 aa9.64□□□□□ -0.87
SCUBE2-203ENST00000518447 EIF2AK4Q9P2K8 1649 aaKnown RBP9.64□□□□□ -0.87
SCUBE2-203ENST00000518447 HSPA1LP34931 641 aa9.63□□□□□ -0.87
SCUBE2-203ENST00000518447 PKD2Q13563 968 aa9.63□□□□□ -0.87
SCUBE2-203ENST00000518447 CPS1P31327 1500 aa9.62□□□□□ -0.87
SCUBE2-203ENST00000518447 ERVK-7P63135 1459 aa9.62□□□□□ -0.87
SCUBE2-203ENST00000518447 MAMSTRQ6ZN01 415 aa9.62□□□□□ -0.87
SCUBE2-203ENST00000518447 NPHP4O75161 1426 aaPredicted RBP9.62□□□□□ -0.87
SCUBE2-203ENST00000518447 FAM135AQ9P2D6 1515 aa9.61□□□□□ -0.87
SCUBE2-203ENST00000518447 WASHC2CQ9Y4E1 1318 aa9.61□□□□□ -0.87
SCUBE2-203ENST00000518447 PIK3C2BO00750 1634 aa9.61□□□□□ -0.87
SCUBE2-203ENST00000518447 LOC105371045A0A1W2PR82 267 aa9.61□□□□□ -0.87
SCUBE2-203ENST00000518447 KANK4Q5T7N3 995 aaPredicted RBP9.61□□□□□ -0.87
SCUBE2-203ENST00000518447 VPS8Q8N3P4 1428 aa9.61□□□□□ -0.87
SCUBE2-203ENST00000518447 SYNMO15061 1565 aa9.61□□□□□ -0.87
SCUBE2-203ENST00000518447 NLRP1Q9C000 1473 aa9.6□□□□□ -0.87
SCUBE2-203ENST00000518447 MIA2Q96PC5 1412 aa9.6□□□□□ -0.87
SCUBE2-203ENST00000518447 METRNQ9UJH8 293 aa9.6□□□□□ -0.87
SCUBE2-203ENST00000518447 PRDM15P57071 1507 aaPredicted RBP9.59□□□□□ -0.87
SCUBE2-203ENST00000518447 LRRC7Q96NW7 1537 aa9.59□□□□□ -0.87
SCUBE2-203ENST00000518447 PTPN23Q9H3S7 1636 aa9.59□□□□□ -0.87
SCUBE2-203ENST00000518447 MED14O60244 1454 aa9.59□□□□□ -0.87
SCUBE2-203ENST00000518447 ATXN8OSP0DMR3 200 aa9.58□□□□□ -0.88
SCUBE2-203ENST00000518447 CDAN1Q8IWY9 1227 aa9.58□□□□□ -0.88
SCUBE2-203ENST00000518447 MYOM3Q5VTT5 1437 aa9.57□□□□□ -0.88
SCUBE2-203ENST00000518447 MYO5BQ9ULV0 1848 aa9.57□□□□□ -0.88
SCUBE2-203ENST00000518447 DUOX2Q9NRD8 1548 aa9.56□□□□□ -0.88
SCUBE2-203ENST00000518447 ANKLE2Q86XL3 938 aa9.55□□□□□ -0.88
SCUBE2-203ENST00000518447 PHF12Q96QT6 1004 aa9.55□□□□□ -0.88
SCUBE2-203ENST00000518447 SCAF11Q99590 1463 aaKnown RBP9.54□□□□□ -0.88
SCUBE2-203ENST00000518447 KIF15Q9NS87 1388 aa9.54□□□□□ -0.88
SCUBE2-203ENST00000518447 ABCC5O15440 1437 aa9.54□□□□□ -0.88
SCUBE2-203ENST00000518447 SETD1AO15047 1707 aaKnown RBP9.53□□□□□ -0.88
SCUBE2-203ENST00000518447 TSPY4P0CV99 314 aa9.53□□□□□ -0.88
SCUBE2-203ENST00000518447 TSPY10P0CW01 314 aa9.53□□□□□ -0.88
SCUBE2-203ENST00000518447 C7P10643 843 aa9.53□□□□□ -0.88
SCUBE2-203ENST00000518447 THEMISQ8N1K5 641 aaPredicted RBP9.53□□□□□ -0.88
SCUBE2-203ENST00000518447 ARHGAP23Q9P227 1491 aa9.53□□□□□ -0.88
SCUBE2-203ENST00000518447 SLIT1O75093 1534 aa9.52□□□□□ -0.88
SCUBE2-203ENST00000518447 GCC2Q8IWJ2 1684 aa9.52□□□□□ -0.89
SCUBE2-203ENST00000518447 TOM1O60784 492 aa9.52□□□□□ -0.89
SCUBE2-203ENST00000518447 LTKP29376 864 aa9.52□□□□□ -0.89
SCUBE2-203ENST00000518447 DAPK1P53355 1430 aa9.52□□□□□ -0.89
SCUBE2-203ENST00000518447 SLC39A7Q92504 469 aa9.52□□□□□ -0.89
SCUBE2-203ENST00000518447 RBM33Q96EV2 1170 aaKnown RBP9.52□□□□□ -0.89
SCUBE2-203ENST00000518447 SCUBE2Q9NQ36 999 aa9.52□□□□□ -0.89
SCUBE2-203ENST00000518447 RRP7BPQ9NSQ0 103 aa9.52□□□□□ -0.89
SCUBE2-203ENST00000518447 ROBO1Q9Y6N7 1651 aa9.51□□□□□ -0.89
SCUBE2-203ENST00000518447 MAP3K1Q13233 1512 aa9.51□□□□□ -0.89
SCUBE2-203ENST00000518447 EFCAB6Q5THR3 1501 aa9.51□□□□□ -0.89
SCUBE2-203ENST00000518447 ERBINQ96RT1 1412 aa9.5□□□□□ -0.89
SCUBE2-203ENST00000518447 ADGRB3O60242 1522 aa9.5□□□□□ -0.89
SCUBE2-203ENST00000518447 ASTLQ6HA08 431 aaPredicted RBP9.49□□□□□ -0.89
SCUBE2-203ENST00000518447 SLC4A1APQ9BWU0 796 aaKnown RBP9.49□□□□□ -0.89
SCUBE2-203ENST00000518447 CHIC2Q9UKJ5 165 aa9.49□□□□□ -0.89
SCUBE2-203ENST00000518447 KDM5AP29375 1690 aaKnown RBP9.48□□□□□ -0.89
SCUBE2-203ENST00000518447 FGD6Q6ZV73 1430 aa9.48□□□□□ -0.89
SCUBE2-203ENST00000518447 RSPH4AQ5TD94 716 aa9.48□□□□□ -0.89
SCUBE2-203ENST00000518447 TXNDC2Q86VQ3 553 aa9.47□□□□□ -0.89
SCUBE2-203ENST00000518447 TET3O43151 1660 aa9.47□□□□□ -0.89
SCUBE2-203ENST00000518447 ARHGAP31Q2M1Z3 1444 aa9.47□□□□□ -0.89
SCUBE2-203ENST00000518447 NWD1Q149M9 1564 aa9.46□□□□□ -0.89
SCUBE2-203ENST00000518447 PHLPP1O60346 1717 aa9.46□□□□□ -0.89
SCUBE2-203ENST00000518447 ATMINO43313 823 aaPredicted RBP9.46□□□□□ -0.9
SCUBE2-203ENST00000518447 PAK3O75914 559 aaPredicted RBP9.46□□□□□ -0.9
SCUBE2-203ENST00000518447 TMEM2Q9UHN6 1383 aa9.46□□□□□ -0.9
SCUBE2-203ENST00000518447 LMTK2Q8IWU2 1503 aa9.46□□□□□ -0.9
SCUBE2-203ENST00000518447 SLC26A8Q96RN1 970 aa9.45□□□□□ -0.9
SCUBE2-203ENST00000518447 CREBZFQ9NS37 354 aa9.45□□□□□ -0.9
SCUBE2-203ENST00000518447 RGS17Q9UGC6 210 aaPredicted RBP9.45□□□□□ -0.9
SCUBE2-203ENST00000518447 TMEM94Q12767 1356 aa9.45□□□□□ -0.9
SCUBE2-203ENST00000518447 E9PCH4 1651 aa9.45□□□□□ -0.9
SCUBE2-203ENST00000518447 MMRN1Q13201 1228 aa9.44□□□□□ -0.9
SCUBE2-203ENST00000518447 TMEM131LA2VDJ0 1609 aa9.44□□□□□ -0.9
SCUBE2-203ENST00000518447 CHD2O14647 1828 aaKnown RBP9.44□□□□□ -0.9
SCUBE2-203ENST00000518447 UNC13BO14795 1591 aa9.43□□□□□ -0.9
SCUBE2-203ENST00000518447 IDI1Q13907 227 aa9.43□□□□□ -0.9
SCUBE2-203ENST00000518447 NOS1P29475 1434 aa9.42□□□□□ -0.9
SCUBE2-203ENST00000518447 COL16A1Q07092 1604 aaPredicted RBP9.42□□□□□ -0.9
SCUBE2-203ENST00000518447 ADGRL2O95490 1459 aa9.41□□□□□ -0.9
SCUBE2-203ENST00000518447 KANK1Q14678 1352 aa9.41□□□□□ -0.9
SCUBE2-203ENST00000518447 ANKRD30AQ9BXX3 1397 aa9.41□□□□□ -0.9
SCUBE2-203ENST00000518447 ZBTB22O15209 634 aa9.41□□□□□ -0.9
SCUBE2-203ENST00000518447 STAG3Q9UJ98 1225 aa9.41□□□□□ -0.9
SCUBE2-203ENST00000518447 ZFYVE9O95405 1425 aa9.4□□□□□ -0.9
SCUBE2-203ENST00000518447 NUTM2DQ5VT03 806 aaPredicted RBP9.4□□□□□ -0.9
SCUBE2-203ENST00000518447 EID1Q9Y6B2 187 aa9.4□□□□□ -0.9
SCUBE2-203ENST00000518447 NKTRP30414 1462 aaKnown RBP9.4□□□□□ -0.91
SCUBE2-203ENST00000518447 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.39□□□□□ -0.91
SCUBE2-203ENST00000518447 LRP6O75581 1613 aa9.39□□□□□ -0.91
SCUBE2-203ENST00000518447 FAM50AQ14320 339 aaKnown RBP9.39□□□□□ -0.91
SCUBE2-203ENST00000518447 POTEAQ6S8J7 498 aa9.39□□□□□ -0.91
SCUBE2-203ENST00000518447 MS4A3Q96HJ5 214 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms