RNA–Protein interactions for RNA: ENST00000517790.1

PVT1-205, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 599 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-205ENST00000517790 PZPP20742 1482 aa8.06□□□□□ -1.12
PVT1-205ENST00000517790 MIA2Q96PC5 1412 aa8.06□□□□□ -1.12
PVT1-205ENST00000517790 TRIM52Q96A61 297 aa8.06□□□□□ -1.12
PVT1-205ENST00000517790 FAM135AQ9P2D6 1515 aa8.06□□□□□ -1.12
PVT1-205ENST00000517790 ZNF644Q9H582 1327 aaPredicted RBP8.05□□□□□ -1.12
PVT1-205ENST00000517790 ROBO1Q9Y6N7 1651 aa8.05□□□□□ -1.12
PVT1-205ENST00000517790 FAM135BQ49AJ0 1406 aa8.05□□□□□ -1.12
PVT1-205ENST00000517790 KIF3BO15066 747 aa8.05□□□□□ -1.12
PVT1-205ENST00000517790 IGSF3O75054 1194 aa8.05□□□□□ -1.12
PVT1-205ENST00000517790 NKX1-1Q15270 411 aaPredicted RBP8.05□□□□□ -1.12
PVT1-205ENST00000517790 ZC3H15Q8WU90 426 aaKnown RBP8.05□□□□□ -1.12
PVT1-205ENST00000517790 EEA1Q15075 1411 aa8.04□□□□□ -1.12
PVT1-205ENST00000517790 KIAA1107Q9UPP5 1409 aa8.04□□□□□ -1.12
PVT1-205ENST00000517790 CFAP65Q6ZU64 1925 aaKnown RBP8.04□□□□□ -1.12
PVT1-205ENST00000517790 RBM33Q96EV2 1170 aaKnown RBP8.04□□□□□ -1.12
PVT1-205ENST00000517790 NLRP1Q9C000 1473 aa8.04□□□□□ -1.12
PVT1-205ENST00000517790 KDM5DQ9BY66 1539 aa8.03□□□□□ -1.12
PVT1-205ENST00000517790 SLC24A3Q9HC58 644 aa8.03□□□□□ -1.12
PVT1-205ENST00000517790 CFDP1Q9UEE9 299 aaPredicted RBP8.03□□□□□ -1.12
PVT1-205ENST00000517790 WASHC2CQ9Y4E1 1318 aa8.03□□□□□ -1.12
PVT1-205ENST00000517790 CCDC18Q5T9S5 1454 aa8.02□□□□□ -1.13
PVT1-205ENST00000517790 DHX29Q7Z478 1369 aaKnown RBP8.02□□□□□ -1.13
PVT1-205ENST00000517790 LTKP29376 864 aa8.02□□□□□ -1.13
PVT1-205ENST00000517790 CASKIN1Q8WXD9 1431 aa8.02□□□□□ -1.13
PVT1-205ENST00000517790 PLEKHH2Q8IVE3 1493 aa8.01□□□□□ -1.13
PVT1-205ENST00000517790 LRP6O75581 1613 aa8.01□□□□□ -1.13
PVT1-205ENST00000517790 PHLPP1O60346 1717 aa8□□□□□ -1.13
PVT1-205ENST00000517790 UBR1Q8IWV7 1749 aa8□□□□□ -1.13
PVT1-205ENST00000517790 TMEM94Q12767 1356 aa8□□□□□ -1.13
PVT1-205ENST00000517790 NCOA2Q15596 1464 aa8□□□□□ -1.13
PVT1-205ENST00000517790 SCAF11Q99590 1463 aaKnown RBP8□□□□□ -1.13
PVT1-205ENST00000517790 MBD5Q9P267 1494 aa8□□□□□ -1.13
PVT1-205ENST00000517790 CCNB3Q8WWL7 1395 aa7.99□□□□□ -1.13
PVT1-205ENST00000517790 HSP90B1P14625 803 aaKnown RBP7.99□□□□□ -1.13
PVT1-205ENST00000517790 CDK11BP21127 795 aaKnown RBP7.99□□□□□ -1.13
PVT1-205ENST00000517790 TXNDC2Q86VQ3 553 aa7.99□□□□□ -1.13
PVT1-205ENST00000517790 MAP3K1Q13233 1512 aa7.98□□□□□ -1.13
PVT1-205ENST00000517790 JCADQ9P266 1359 aa7.98□□□□□ -1.13
PVT1-205ENST00000517790 APBB1O00213 710 aa7.98□□□□□ -1.13
PVT1-205ENST00000517790 KCTD17Q8N5Z5 321 aa7.98□□□□□ -1.13
PVT1-205ENST00000517790 RTEL1-TNFRSF6BF6WH68 1400 aa7.97□□□□□ -1.13
PVT1-205ENST00000517790 MEX3CQ5U5Q3 659 aaKnown RBP7.97□□□□□ -1.13
PVT1-205ENST00000517790 PROSER2Q86WR7 435 aaPredicted RBP7.97□□□□□ -1.13
PVT1-205ENST00000517790 ERVK-7P63135 1459 aa7.97□□□□□ -1.13
PVT1-205ENST00000517790 COL16A1Q07092 1604 aaPredicted RBP7.96□□□□□ -1.13
PVT1-205ENST00000517790 ARHGAP23Q9P227 1491 aa7.96□□□□□ -1.13
PVT1-205ENST00000517790 RXRBP28702 533 aa7.96□□□□□ -1.14
PVT1-205ENST00000517790 ZNF772Q68DY9 489 aaPredicted RBP7.96□□□□□ -1.14
PVT1-205ENST00000517790 RGS22Q8NE09 1264 aa7.96□□□□□ -1.14
PVT1-205ENST00000517790 ABCC3O15438 1527 aa7.96□□□□□ -1.14
PVT1-205ENST00000517790 SLIT1O75093 1534 aa7.95□□□□□ -1.14
PVT1-205ENST00000517790 RAD21O60216 631 aa7.95□□□□□ -1.14
PVT1-205ENST00000517790 KCNV2Q8TDN2 545 aa7.95□□□□□ -1.14
PVT1-205ENST00000517790 PUS7Q96PZ0 661 aaKnown RBP7.95□□□□□ -1.14
PVT1-205ENST00000517790 SLC26A8Q96RN1 970 aa7.95□□□□□ -1.14
PVT1-205ENST00000517790 SLAIN2Q9P270 581 aa7.95□□□□□ -1.14
PVT1-205ENST00000517790 CIZ1Q9ULV3 898 aaPredicted RBP7.95□□□□□ -1.14
PVT1-205ENST00000517790 TIAM1Q13009 1591 aa7.95□□□□□ -1.14
PVT1-205ENST00000517790 CEP152O94986 1710 aa7.95□□□□□ -1.14
PVT1-205ENST00000517790 FYCO1Q9BQS8 1478 aa7.94□□□□□ -1.14
PVT1-205ENST00000517790 KCNA6P17658 529 aa7.94□□□□□ -1.14
PVT1-205ENST00000517790 LRRC9Q6ZRR7 1453 aa7.94□□□□□ -1.14
PVT1-205ENST00000517790 SETBP1Q9Y6X0 1596 aa7.93□□□□□ -1.14
PVT1-205ENST00000517790 NUTM2BA6NNL0 878 aaPredicted RBP7.93□□□□□ -1.14
PVT1-205ENST00000517790 NUTM2EB1AL46 878 aaPredicted RBP7.93□□□□□ -1.14
PVT1-205ENST00000517790 NUTM2AQ8IVF1 878 aaPredicted RBP7.93□□□□□ -1.14
PVT1-205ENST00000517790 PRDM15P57071 1507 aaPredicted RBP7.93□□□□□ -1.14
PVT1-205ENST00000517790 TRAIPQ9BWF2 469 aa7.92□□□□□ -1.14
PVT1-205ENST00000517790 EID1Q9Y6B2 187 aa7.92□□□□□ -1.14
PVT1-205ENST00000517790 SPATA31A6Q5VVP1 1343 aa7.92□□□□□ -1.14
PVT1-205ENST00000517790 MTUS2Q5JR59 1369 aa7.92□□□□□ -1.14
PVT1-205ENST00000517790 RGS12O14924 1447 aa7.92□□□□□ -1.14
PVT1-205ENST00000517790 CCDC141Q6ZP82 1450 aa7.92□□□□□ -1.14
PVT1-205ENST00000517790 CDK12Q9NYV4 1490 aaPredicted RBP7.92□□□□□ -1.14
PVT1-205ENST00000517790 PIK3C2BO00750 1634 aa7.92□□□□□ -1.14
PVT1-205ENST00000517790 MROH1Q8NDA8 1641 aa7.92□□□□□ -1.14
PVT1-205ENST00000517790 STAG3Q9UJ98 1225 aa7.91□□□□□ -1.14
PVT1-205ENST00000517790 AFF2P51816 1311 aa7.91□□□□□ -1.14
PVT1-205ENST00000517790 MSH6P52701 1360 aa7.91□□□□□ -1.14
PVT1-205ENST00000517790 TMEM2Q9UHN6 1383 aa7.91□□□□□ -1.14
PVT1-205ENST00000517790 TET3O43151 1660 aa7.91□□□□□ -1.14
PVT1-205ENST00000517790 SHPRHQ149N8 1683 aa7.91□□□□□ -1.14
PVT1-205ENST00000517790 CAMSAP2Q08AD1 1489 aa7.9□□□□□ -1.14
PVT1-205ENST00000517790 NUTM2DQ5VT03 806 aaPredicted RBP7.9□□□□□ -1.14
PVT1-205ENST00000517790 PLCD3Q8N3E9 789 aa7.9□□□□□ -1.14
PVT1-205ENST00000517790 KDM5AP29375 1690 aaKnown RBP7.89□□□□□ -1.15
PVT1-205ENST00000517790 NWD1Q149M9 1564 aa7.89□□□□□ -1.15
PVT1-205ENST00000517790 FGD6Q6ZV73 1430 aa7.89□□□□□ -1.15
PVT1-205ENST00000517790 ZMYND10O75800 440 aa7.89□□□□□ -1.15
PVT1-205ENST00000517790 NKTRP30414 1462 aaKnown RBP7.88□□□□□ -1.15
PVT1-205ENST00000517790 RNF25Q96BH1 459 aaPredicted RBP7.88□□□□□ -1.15
PVT1-205ENST00000517790 ZRANB1Q9UGI0 708 aa7.88□□□□□ -1.15
PVT1-205ENST00000517790 DIP2AQ14689 1571 aa7.88□□□□□ -1.15
PVT1-205ENST00000517790 MKRN3Q13064 507 aaKnown RBP7.87□□□□□ -1.15
PVT1-205ENST00000517790 QTRT2Q9H974 415 aaKnown RBP7.87□□□□□ -1.15
PVT1-205ENST00000517790 MTMR7Q9Y216 660 aa7.87□□□□□ -1.15
PVT1-205ENST00000517790 AHDC1Q5TGY3 1603 aaPredicted RBP7.87□□□□□ -1.15
PVT1-205ENST00000517790 MAST1Q9Y2H9 1570 aa7.87□□□□□ -1.15
PVT1-205ENST00000517790 EFCAB6Q5THR3 1501 aa7.87□□□□□ -1.15
PVT1-205ENST00000517790 RBM6P78332 1123 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms