RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 ERVK-7P63135 1459 aa19.98■□□□□ 0.79
SDHA-215ENST00000512962 NCOA2Q15596 1464 aa19.98■□□□□ 0.79
SDHA-215ENST00000512962 POTEAQ6S8J7 498 aa19.95■□□□□ 0.78
SDHA-215ENST00000512962 ARHGEF5Q12774 1597 aa19.95■□□□□ 0.78
SDHA-215ENST00000512962 ECM2O94769 699 aaPredicted RBP19.93■□□□□ 0.78
SDHA-215ENST00000512962 SCAF11Q99590 1463 aaKnown RBP19.92■□□□□ 0.78
SDHA-215ENST00000512962 ARHGAP23Q9P227 1491 aa19.92■□□□□ 0.78
SDHA-215ENST00000512962 ROBO1Q9Y6N7 1651 aa19.91■□□□□ 0.78
SDHA-215ENST00000512962 EIF2AK4Q9P2K8 1649 aaKnown RBP19.9■□□□□ 0.78
SDHA-215ENST00000512962 SLIT1O75093 1534 aa19.89■□□□□ 0.77
SDHA-215ENST00000512962 LTKP29376 864 aa19.89■□□□□ 0.77
SDHA-215ENST00000512962 MAST1Q9Y2H9 1570 aa19.88■□□□□ 0.77
SDHA-215ENST00000512962 MAP3K1Q13233 1512 aa19.87■□□□□ 0.77
SDHA-215ENST00000512962 PIK3C2BO00750 1634 aa19.87■□□□□ 0.77
SDHA-215ENST00000512962 PLEKHG5O94827 1062 aa19.86■□□□□ 0.77
SDHA-215ENST00000512962 ZBTB47Q9UFB7 747 aaPredicted RBP19.84■□□□□ 0.77
SDHA-215ENST00000512962 FAM135BQ49AJ0 1406 aa19.84■□□□□ 0.77
SDHA-215ENST00000512962 RBM33Q96EV2 1170 aaKnown RBP19.79■□□□□ 0.76
SDHA-215ENST00000512962 PRDM15P57071 1507 aaPredicted RBP19.79■□□□□ 0.76
SDHA-215ENST00000512962 TMEM94Q12767 1356 aa19.79■□□□□ 0.76
SDHA-215ENST00000512962 TXNDC2Q86VQ3 553 aa19.78■□□□□ 0.76
SDHA-215ENST00000512962 PHLPP1O60346 1717 aa19.77■□□□□ 0.76
SDHA-215ENST00000512962 RBM42Q9BTD8 480 aaKnown RBP19.77■□□□□ 0.76
SDHA-215ENST00000512962 TET3O43151 1660 aa19.77■□□□□ 0.76
SDHA-215ENST00000512962 RSPH4AQ5TD94 716 aa19.76■□□□□ 0.75
SDHA-215ENST00000512962 NWD1Q149M9 1564 aa19.75■□□□□ 0.75
SDHA-215ENST00000512962 RGL2O15211 777 aa19.74■□□□□ 0.75
SDHA-215ENST00000512962 AKT1S1Q96B36 256 aa19.74■□□□□ 0.75
SDHA-215ENST00000512962 TSPY4P0CV99 314 aa19.73■□□□□ 0.75
SDHA-215ENST00000512962 TSPY10P0CW01 314 aa19.73■□□□□ 0.75
SDHA-215ENST00000512962 ARHGAP31Q2M1Z3 1444 aa19.73■□□□□ 0.75
SDHA-215ENST00000512962 LRP6O75581 1613 aa19.73■□□□□ 0.75
SDHA-215ENST00000512962 COL16A1Q07092 1604 aaPredicted RBP19.73■□□□□ 0.75
SDHA-215ENST00000512962 TMEM2Q9UHN6 1383 aa19.72■□□□□ 0.75
SDHA-215ENST00000512962 CROCC2H7BZ55 1655 aa19.72■□□□□ 0.75
SDHA-215ENST00000512962 KDM5AP29375 1690 aaKnown RBP19.72■□□□□ 0.75
SDHA-215ENST00000512962 CIZ1Q9ULV3 898 aaPredicted RBP19.72■□□□□ 0.75
SDHA-215ENST00000512962 DUOX2Q9NRD8 1548 aa19.71■□□□□ 0.75
SDHA-215ENST00000512962 EFCAB6Q5THR3 1501 aa19.71■□□□□ 0.75
SDHA-215ENST00000512962 SPDYE1Q8NFV5 336 aaPredicted RBP19.7■□□□□ 0.74
SDHA-215ENST00000512962 HAP1P54257 671 aaPredicted RBP19.69■□□□□ 0.74
SDHA-215ENST00000512962 LRRC9Q6ZRR7 1453 aa19.68■□□□□ 0.74
SDHA-215ENST00000512962 SLC26A8Q96RN1 970 aa19.68■□□□□ 0.74
SDHA-215ENST00000512962 MYO5BQ9ULV0 1848 aa19.67■□□□□ 0.74
SDHA-215ENST00000512962 NKTRP30414 1462 aaKnown RBP19.67■□□□□ 0.74
SDHA-215ENST00000512962 KCNA6P17658 529 aa19.66■□□□□ 0.74
SDHA-215ENST00000512962 EID1Q9Y6B2 187 aa19.65■□□□□ 0.74
SDHA-215ENST00000512962 PROSER2Q86WR7 435 aaPredicted RBP19.64■□□□□ 0.73
SDHA-215ENST00000512962 ADGRB3O60242 1522 aa19.64■□□□□ 0.73
SDHA-215ENST00000512962 CHD2O14647 1828 aaKnown RBP19.64■□□□□ 0.73
SDHA-215ENST00000512962 BBXQ8WY36 941 aaPredicted RBP19.63■□□□□ 0.73
SDHA-215ENST00000512962 KIF15Q9NS87 1388 aa19.62■□□□□ 0.73
SDHA-215ENST00000512962 JCADQ9P266 1359 aa19.62■□□□□ 0.73
SDHA-215ENST00000512962 UPF1Q92900 1129 aaKnown RBP eCLIP19.62■□□□□ 0.73
SDHA-215ENST00000512962 ERBINQ96RT1 1412 aa19.61■□□□□ 0.73
SDHA-215ENST00000512962 IDI1Q13907 227 aa19.61■□□□□ 0.73
SDHA-215ENST00000512962 MYOM3Q5VTT5 1437 aa19.6■□□□□ 0.73
SDHA-215ENST00000512962 KANK4Q5T7N3 995 aaPredicted RBP19.6■□□□□ 0.73
SDHA-215ENST00000512962 LMTK2Q8IWU2 1503 aa19.6■□□□□ 0.73
SDHA-215ENST00000512962 SHPRHQ149N8 1683 aa19.59■□□□□ 0.73
SDHA-215ENST00000512962 CLEC11AQ9Y240 323 aa19.59■□□□□ 0.73
SDHA-215ENST00000512962 ABCC5O15440 1437 aa19.59■□□□□ 0.73
SDHA-215ENST00000512962 NOS1P29475 1434 aa19.58■□□□□ 0.72
SDHA-215ENST00000512962 MSH6P52701 1360 aa19.57■□□□□ 0.72
SDHA-215ENST00000512962 GCC2Q8IWJ2 1684 aa19.57■□□□□ 0.72
SDHA-215ENST00000512962 REM2Q8IYK8 340 aaPredicted RBP19.57■□□□□ 0.72
SDHA-215ENST00000512962 SLAIN2Q9P270 581 aa19.57■□□□□ 0.72
SDHA-215ENST00000512962 TRIM52Q96A61 297 aa19.56■□□□□ 0.72
SDHA-215ENST00000512962 RRP7BPQ9NSQ0 103 aa19.56■□□□□ 0.72
SDHA-215ENST00000512962 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.56■□□□□ 0.72
SDHA-215ENST00000512962 DIP2AQ14689 1571 aa19.56■□□□□ 0.72
SDHA-215ENST00000512962 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.56■□□□□ 0.72
SDHA-215ENST00000512962 AHDC1Q5TGY3 1603 aaPredicted RBP19.55■□□□□ 0.72
SDHA-215ENST00000512962 PTPN23Q9H3S7 1636 aa19.54■□□□□ 0.72
SDHA-215ENST00000512962 ZFYVE9O95405 1425 aa19.54■□□□□ 0.72
SDHA-215ENST00000512962 NUBP1P53384 320 aa19.53■□□□□ 0.72
SDHA-215ENST00000512962 VPS8Q8N3P4 1428 aa19.52■□□□□ 0.72
SDHA-215ENST00000512962 PRR29P0C7W0 189 aa19.52■□□□□ 0.72
SDHA-215ENST00000512962 CREBZFQ9NS37 354 aa19.52■□□□□ 0.72
SDHA-215ENST00000512962 TMEM131LA2VDJ0 1609 aa19.51■□□□□ 0.71
SDHA-215ENST00000512962 DAPK1P53355 1430 aa19.51■□□□□ 0.71
SDHA-215ENST00000512962 FGD6Q6ZV73 1430 aa19.51■□□□□ 0.71
SDHA-215ENST00000512962 GSE1Q14687 1217 aa19.48■□□□□ 0.71
SDHA-215ENST00000512962 SPATA31A6Q5VVP1 1343 aa19.48■□□□□ 0.71
SDHA-215ENST00000512962 PLEKHG1Q9ULL1 1385 aa19.47■□□□□ 0.71
SDHA-215ENST00000512962 KANK1Q14678 1352 aa19.46■□□□□ 0.71
SDHA-215ENST00000512962 ADAMTS13Q76LX8 1427 aa19.45■□□□□ 0.7
SDHA-215ENST00000512962 RIMS2Q9UQ26 1411 aa19.45■□□□□ 0.7
SDHA-215ENST00000512962 MEX3CQ5U5Q3 659 aaKnown RBP19.45■□□□□ 0.7
SDHA-215ENST00000512962 PAXIP1Q6ZW49 1069 aaPredicted RBP19.45■□□□□ 0.7
SDHA-215ENST00000512962 ZNF772Q68DY9 489 aaPredicted RBP19.44■□□□□ 0.7
SDHA-215ENST00000512962 BCANQ96GW7 911 aa19.44■□□□□ 0.7
SDHA-215ENST00000512962 CDK12Q9NYV4 1490 aaPredicted RBP19.43■□□□□ 0.7
SDHA-215ENST00000512962 MNX1P50219 401 aaPredicted RBP19.43■□□□□ 0.7
SDHA-215ENST00000512962 NHSL1Q5SYE7 1610 aa19.43■□□□□ 0.7
SDHA-215ENST00000512962 RGS12O14924 1447 aa19.42■□□□□ 0.7
SDHA-215ENST00000512962 CHGAP10645 457 aaKnown RBP19.42■□□□□ 0.7
SDHA-215ENST00000512962 SRCAPQ6ZRS2 3230 aa19.42■□□□□ 0.7
SDHA-215ENST00000512962 CFAP44Q96MT7 982 aa19.41■□□□□ 0.7
SDHA-215ENST00000512962 CHIC2Q9UKJ5 165 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms