RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 POLR1AO95602 1720 aaPredicted RBP13.87□□□□□ -0.19
MSH3-203ENST00000512531 MED14O60244 1454 aa13.87□□□□□ -0.19
MSH3-203ENST00000512531 SHANK2Q9UPX8 1470 aa13.87□□□□□ -0.19
MSH3-203ENST00000512531 PLCD3Q8N3E9 789 aa13.86□□□□□ -0.19
MSH3-203ENST00000512531 TSHZ2Q9NRE2 1034 aa13.86□□□□□ -0.19
MSH3-203ENST00000512531 DEPDC5O75140 1603 aa13.86□□□□□ -0.19
MSH3-203ENST00000512531 FBXO31Q5XUX0 539 aaPredicted RBP13.85□□□□□ -0.19
MSH3-203ENST00000512531 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.84□□□□□ -0.19
MSH3-203ENST00000512531 UGGT1Q9NYU2 1555 aa13.83□□□□□ -0.2
MSH3-203ENST00000512531 MIER1Q8N108 512 aa13.82□□□□□ -0.2
MSH3-203ENST00000512531 MAST1Q9Y2H9 1570 aa13.82□□□□□ -0.2
MSH3-203ENST00000512531 RNF17Q9BXT8 1623 aaKnown RBP13.82□□□□□ -0.2
MSH3-203ENST00000512531 NPHP4O75161 1426 aaPredicted RBP13.81□□□□□ -0.2
MSH3-203ENST00000512531 VWDEQ8N2E2 1590 aa13.81□□□□□ -0.2
MSH3-203ENST00000512531 ZC3H13Q5T200 1668 aaKnown RBP13.81□□□□□ -0.2
MSH3-203ENST00000512531 EIF2AK4Q9P2K8 1649 aaKnown RBP13.8□□□□□ -0.2
MSH3-203ENST00000512531 HSPA1LP34931 641 aa13.79□□□□□ -0.2
MSH3-203ENST00000512531 ABCC3O15438 1527 aa13.79□□□□□ -0.2
MSH3-203ENST00000512531 TPRNQ4KMQ1 711 aa13.78□□□□□ -0.2
MSH3-203ENST00000512531 ACIN1Q9UKV3 1341 aaKnown RBP13.78□□□□□ -0.2
MSH3-203ENST00000512531 IQGAP1P46940 1657 aa13.76□□□□□ -0.21
MSH3-203ENST00000512531 ERVK-7P63135 1459 aa13.76□□□□□ -0.21
MSH3-203ENST00000512531 FAM50AQ14320 339 aaKnown RBP13.76□□□□□ -0.21
MSH3-203ENST00000512531 ARHGAP31Q2M1Z3 1444 aa13.75□□□□□ -0.21
MSH3-203ENST00000512531 MYOM3Q5VTT5 1437 aa13.75□□□□□ -0.21
MSH3-203ENST00000512531 PIP4K2BP78356 416 aa13.75□□□□□ -0.21
MSH3-203ENST00000512531 SPRYD3Q8NCJ5 442 aa13.75□□□□□ -0.21
MSH3-203ENST00000512531 MED1Q15648 1581 aaPredicted RBP13.75□□□□□ -0.21
MSH3-203ENST00000512531 SYNMO15061 1565 aa13.74□□□□□ -0.21
MSH3-203ENST00000512531 DUOX2Q9NRD8 1548 aa13.74□□□□□ -0.21
MSH3-203ENST00000512531 SETD5Q9C0A6 1442 aa13.73□□□□□ -0.21
MSH3-203ENST00000512531 MROH1Q8NDA8 1641 aa13.73□□□□□ -0.21
MSH3-203ENST00000512531 ALKQ9UM73 1620 aa13.73□□□□□ -0.21
MSH3-203ENST00000512531 ZNF316A6NFI3 1004 aaPredicted RBP13.73□□□□□ -0.21
MSH3-203ENST00000512531 LRRC7Q96NW7 1537 aa13.73□□□□□ -0.21
MSH3-203ENST00000512531 CHGAP10645 457 aaKnown RBP13.72□□□□□ -0.21
MSH3-203ENST00000512531 ARHGAP23Q9P227 1491 aa13.72□□□□□ -0.21
MSH3-203ENST00000512531 DHX57Q6P158 1386 aaKnown RBP13.71□□□□□ -0.21
MSH3-203ENST00000512531 SLIT1O75093 1534 aa13.71□□□□□ -0.21
MSH3-203ENST00000512531 ITGAEP38570 1179 aa13.71□□□□□ -0.21
MSH3-203ENST00000512531 CIZ1Q9ULV3 898 aaPredicted RBP13.71□□□□□ -0.21
MSH3-203ENST00000512531 SCAF11Q99590 1463 aaKnown RBP13.71□□□□□ -0.21
MSH3-203ENST00000512531 FGD6Q6ZV73 1430 aa13.7□□□□□ -0.22
MSH3-203ENST00000512531 ERBINQ96RT1 1412 aa13.7□□□□□ -0.22
MSH3-203ENST00000512531 UBR1Q8IWV7 1749 aa13.7□□□□□ -0.22
MSH3-203ENST00000512531 PRDM15P57071 1507 aaPredicted RBP13.69□□□□□ -0.22
MSH3-203ENST00000512531 DIEXFQ68CQ4 756 aaKnown RBP13.69□□□□□ -0.22
MSH3-203ENST00000512531 RNF25Q96BH1 459 aaPredicted RBP13.68□□□□□ -0.22
MSH3-203ENST00000512531 STRCP1A6NGW2 1772 aa13.68□□□□□ -0.22
MSH3-203ENST00000512531 RAB3GAP2Q9H2M9 1393 aa13.67□□□□□ -0.22
MSH3-203ENST00000512531 KIF15Q9NS87 1388 aa13.67□□□□□ -0.22
MSH3-203ENST00000512531 TXNDC2Q86VQ3 553 aa13.66□□□□□ -0.22
MSH3-203ENST00000512531 TIMELESSQ9UNS1 1208 aa13.66□□□□□ -0.22
MSH3-203ENST00000512531 EID1Q9Y6B2 187 aa13.66□□□□□ -0.22
MSH3-203ENST00000512531 CEP152O94986 1710 aa13.66□□□□□ -0.22
MSH3-203ENST00000512531 KDM5AP29375 1690 aaKnown RBP13.66□□□□□ -0.22
MSH3-203ENST00000512531 ABCC5O15440 1437 aa13.65□□□□□ -0.22
MSH3-203ENST00000512531 LTKP29376 864 aa13.65□□□□□ -0.22
MSH3-203ENST00000512531 LMTK2Q8IWU2 1503 aa13.64□□□□□ -0.23
MSH3-203ENST00000512531 KANK1Q14678 1352 aa13.64□□□□□ -0.23
MSH3-203ENST00000512531 TMEM2Q9UHN6 1383 aa13.64□□□□□ -0.23
MSH3-203ENST00000512531 FAM135BQ49AJ0 1406 aa13.63□□□□□ -0.23
MSH3-203ENST00000512531 CFAP65Q6ZU64 1925 aaKnown RBP13.62□□□□□ -0.23
MSH3-203ENST00000512531 CROCC2H7BZ55 1655 aa13.62□□□□□ -0.23
MSH3-203ENST00000512531 DAPK1P53355 1430 aa13.61□□□□□ -0.23
MSH3-203ENST00000512531 PTPN23Q9H3S7 1636 aa13.61□□□□□ -0.23
MSH3-203ENST00000512531 ANKRD30AQ9BXX3 1397 aa13.6□□□□□ -0.23
MSH3-203ENST00000512531 KCNA6P17658 529 aa13.6□□□□□ -0.23
MSH3-203ENST00000512531 HS6ST3Q8IZP7 471 aa13.6□□□□□ -0.23
MSH3-203ENST00000512531 RRP7BPQ9NSQ0 103 aa13.6□□□□□ -0.23
MSH3-203ENST00000512531 EFCAB6Q5THR3 1501 aa13.59□□□□□ -0.23
MSH3-203ENST00000512531 PIK3C2BO00750 1634 aa13.59□□□□□ -0.23
MSH3-203ENST00000512531 NOS1P29475 1434 aa13.58□□□□□ -0.24
MSH3-203ENST00000512531 IDI1Q13907 227 aa13.58□□□□□ -0.24
MSH3-203ENST00000512531 SLC52A1Q9NWF4 448 aa13.58□□□□□ -0.24
MSH3-203ENST00000512531 XIRP1Q702N8 1843 aaKnown RBP13.57□□□□□ -0.24
MSH3-203ENST00000512531 HFM1A2PYH4 1435 aa13.57□□□□□ -0.24
MSH3-203ENST00000512531 TET3O43151 1660 aa13.57□□□□□ -0.24
MSH3-203ENST00000512531 CENPBP07199 599 aaPredicted RBP13.57□□□□□ -0.24
MSH3-203ENST00000512531 NKX1-1Q15270 411 aaPredicted RBP13.57□□□□□ -0.24
MSH3-203ENST00000512531 TMEM94Q12767 1356 aa13.56□□□□□ -0.24
MSH3-203ENST00000512531 ADGRL2O95490 1459 aa13.55□□□□□ -0.24
MSH3-203ENST00000512531 NKTRP30414 1462 aaKnown RBP13.55□□□□□ -0.24
MSH3-203ENST00000512531 RPRD2Q5VT52 1461 aaKnown RBP13.55□□□□□ -0.24
MSH3-203ENST00000512531 NUBP1P53384 320 aa13.54□□□□□ -0.24
MSH3-203ENST00000512531 RGS17Q9UGC6 210 aaPredicted RBP13.54□□□□□ -0.24
MSH3-203ENST00000512531 ADGRB3O60242 1522 aa13.54□□□□□ -0.24
MSH3-203ENST00000512531 HDGFP51858 240 aaKnown RBP13.53□□□□□ -0.24
MSH3-203ENST00000512531 NWD1Q149M9 1564 aa13.53□□□□□ -0.24
MSH3-203ENST00000512531 PROSER2Q86WR7 435 aaPredicted RBP13.52□□□□□ -0.25
MSH3-203ENST00000512531 ZBTB47Q9UFB7 747 aaPredicted RBP13.52□□□□□ -0.25
MSH3-203ENST00000512531 NCOA3Q9Y6Q9 1424 aa13.52□□□□□ -0.25
MSH3-203ENST00000512531 ZFYVE9O95405 1425 aa13.49□□□□□ -0.25
MSH3-203ENST00000512531 MSH6P52701 1360 aa13.49□□□□□ -0.25
MSH3-203ENST00000512531 PLEKHG1Q9ULL1 1385 aa13.49□□□□□ -0.25
MSH3-203ENST00000512531 SLC26A8Q96RN1 970 aa13.49□□□□□ -0.25
MSH3-203ENST00000512531 CHIC2Q9UKJ5 165 aa13.49□□□□□ -0.25
MSH3-203ENST00000512531 GCC2Q8IWJ2 1684 aa13.49□□□□□ -0.25
MSH3-203ENST00000512531 ANKRD50Q9ULJ7 1429 aa13.48□□□□□ -0.25
MSH3-203ENST00000512531 ROCK1Q13464 1354 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms