RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 PPP2R1AP30153 589 aa16.63■□□□□ 0.25
PCDHA4-202ENST00000512229 NOP58Q9Y2X3 529 aaKnown RBP16.63■□□□□ 0.25
PCDHA4-202ENST00000512229 BCL2L13Q9BXK5 485 aa16.63■□□□□ 0.25
PCDHA4-202ENST00000512229 RUNDC1Q96C34 613 aa16.63■□□□□ 0.25
PCDHA4-202ENST00000512229 WDR62O43379 1518 aa16.63■□□□□ 0.25
PCDHA4-202ENST00000512229 EXOC6Q8TAG9 804 aa16.62■□□□□ 0.25
PCDHA4-202ENST00000512229 KIAA0556O60303 1618 aa16.62■□□□□ 0.25
PCDHA4-202ENST00000512229 FANCAO15360 1455 aa16.62■□□□□ 0.25
PCDHA4-202ENST00000512229 PNISRQ8TF01 805 aaKnown RBP16.62■□□□□ 0.25
PCDHA4-202ENST00000512229 ELL2O00472 640 aaPredicted RBP16.61■□□□□ 0.25
PCDHA4-202ENST00000512229 CCDC184Q52MB2 194 aa16.61■□□□□ 0.25
PCDHA4-202ENST00000512229 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
PCDHA4-202ENST00000512229 NUP160Q12769 1436 aa16.6■□□□□ 0.25
PCDHA4-202ENST00000512229 ANP32EQ9BTT0 268 aa16.6■□□□□ 0.25
PCDHA4-202ENST00000512229 PLCH2O75038 1416 aa16.6■□□□□ 0.25
PCDHA4-202ENST00000512229 RIPK4P57078 832 aa16.59■□□□□ 0.25
PCDHA4-202ENST00000512229 APBB1O00213 710 aa16.59■□□□□ 0.25
PCDHA4-202ENST00000512229 ABCA5Q8WWZ7 1642 aa16.58■□□□□ 0.24
PCDHA4-202ENST00000512229 DHX29Q7Z478 1369 aaKnown RBP16.57■□□□□ 0.24
PCDHA4-202ENST00000512229 DISP1Q96F81 1524 aa16.57■□□□□ 0.24
PCDHA4-202ENST00000512229 CRBNQ96SW2 442 aa16.57■□□□□ 0.24
PCDHA4-202ENST00000512229 ZKSCAN2Q63HK3 967 aa16.56■□□□□ 0.24
PCDHA4-202ENST00000512229 THEMISQ8N1K5 641 aaPredicted RBP16.56■□□□□ 0.24
PCDHA4-202ENST00000512229 GOLGA6L22H0YM25 854 aa16.56■□□□□ 0.24
PCDHA4-202ENST00000512229 MAPKBP1O60336 1514 aa16.56■□□□□ 0.24
PCDHA4-202ENST00000512229 TCOF1Q13428 1488 aaKnown RBP16.55■□□□□ 0.24
PCDHA4-202ENST00000512229 PSME1Q06323 249 aa16.55■□□□□ 0.24
PCDHA4-202ENST00000512229 SLC4A10Q6U841 1118 aa16.55■□□□□ 0.24
PCDHA4-202ENST00000512229 COG6Q9Y2V7 657 aa16.55■□□□□ 0.24
PCDHA4-202ENST00000512229 CDCA7LQ96GN5 454 aa16.55■□□□□ 0.24
PCDHA4-202ENST00000512229 IDI1Q13907 227 aa16.54■□□□□ 0.24
PCDHA4-202ENST00000512229 TCP11L2Q8N4U5 519 aa16.54■□□□□ 0.24
PCDHA4-202ENST00000512229 CDK19Q9BWU1 502 aa16.54■□□□□ 0.24
PCDHA4-202ENST00000512229 CABP1Q9NZU7 370 aa16.54■□□□□ 0.24
PCDHA4-202ENST00000512229 CENPQQ7L2Z9 268 aaPredicted RBP16.53■□□□□ 0.24
PCDHA4-202ENST00000512229 CFAP44Q96MT7 982 aa16.53■□□□□ 0.24
PCDHA4-202ENST00000512229 HMOX1P09601 288 aa16.53■□□□□ 0.24
PCDHA4-202ENST00000512229 DENND4BO75064 1496 aaPredicted RBP16.53■□□□□ 0.24
PCDHA4-202ENST00000512229 ADGRF5Q8IZF2 1346 aa16.52■□□□□ 0.24
PCDHA4-202ENST00000512229 CFAP43Q8NDM7 1665 aa16.52■□□□□ 0.24
PCDHA4-202ENST00000512229 ASXL2Q76L83 1435 aa16.52■□□□□ 0.24
PCDHA4-202ENST00000512229 HMMRO75330 724 aa16.51■□□□□ 0.23
PCDHA4-202ENST00000512229 SLC26A8Q96RN1 970 aa16.51■□□□□ 0.23
PCDHA4-202ENST00000512229 HSP90AB1P08238 724 aaKnown RBP16.5■□□□□ 0.23
PCDHA4-202ENST00000512229 NLRP6P59044 892 aa16.5■□□□□ 0.23
PCDHA4-202ENST00000512229 KCNJ4P48050 445 aa16.49■□□□□ 0.23
PCDHA4-202ENST00000512229 FBXO31Q5XUX0 539 aaPredicted RBP16.49■□□□□ 0.23
PCDHA4-202ENST00000512229 NCLP19338 710 aaKnown RBP16.48■□□□□ 0.23
PCDHA4-202ENST00000512229 TEFQ10587 303 aa16.48■□□□□ 0.23
PCDHA4-202ENST00000512229 HSCBQ8IWL3 235 aa16.48■□□□□ 0.23
PCDHA4-202ENST00000512229 HDAC5Q9UQL6 1122 aa16.48■□□□□ 0.23
PCDHA4-202ENST00000512229 ITSN2Q9NZM3 1697 aa16.48■□□□□ 0.23
PCDHA4-202ENST00000512229 ZNF692Q9BU19 519 aaPredicted RBP16.47■□□□□ 0.23
PCDHA4-202ENST00000512229 SYCP2Q9BX26 1530 aa16.47■□□□□ 0.23
PCDHA4-202ENST00000512229 ATAD2Q6PL18 1390 aa16.47■□□□□ 0.23
PCDHA4-202ENST00000512229 GNAI1P63096 354 aa16.47■□□□□ 0.23
PCDHA4-202ENST00000512229 TARBP1Q13395 1621 aaKnown RBP16.47■□□□□ 0.23
PCDHA4-202ENST00000512229 DZIP1LQ8IYY4 767 aaKnown RBP16.46■□□□□ 0.23
PCDHA4-202ENST00000512229 POGZQ7Z3K3 1410 aa16.46■□□□□ 0.23
PCDHA4-202ENST00000512229 TRAPPC8Q9Y2L5 1435 aa16.46■□□□□ 0.23
PCDHA4-202ENST00000512229 PBRM1Q86U86 1689 aa16.46■□□□□ 0.23
PCDHA4-202ENST00000512229 ZNF330Q9Y3S2 320 aaPredicted RBP16.46■□□□□ 0.23
PCDHA4-202ENST00000512229 C1orf141Q5JVX7 400 aa16.45■□□□□ 0.22
PCDHA4-202ENST00000512229 WDR7Q9Y4E6 1490 aa16.45■□□□□ 0.22
PCDHA4-202ENST00000512229 SAMD9Q5K651 1589 aa16.45■□□□□ 0.22
PCDHA4-202ENST00000512229 RTEL1-TNFRSF6BF6WH68 1400 aa16.45■□□□□ 0.22
PCDHA4-202ENST00000512229 NPHP1O15259 732 aa16.45■□□□□ 0.22
PCDHA4-202ENST00000512229 NUTM2GQ5VZR2 741 aa16.45■□□□□ 0.22
PCDHA4-202ENST00000512229 DDX19BQ9UMR2 479 aa16.45■□□□□ 0.22
PCDHA4-202ENST00000512229 KDM5BQ9UGL1 1544 aa16.44■□□□□ 0.22
PCDHA4-202ENST00000512229 CCDC61Q9Y6R9 512 aa16.44■□□□□ 0.22
PCDHA4-202ENST00000512229 MCCP23508 829 aa16.43■□□□□ 0.22
PCDHA4-202ENST00000512229 PRKAR2BP31323 418 aa16.43■□□□□ 0.22
PCDHA4-202ENST00000512229 PPP6R1Q9UPN7 881 aa16.43■□□□□ 0.22
PCDHA4-202ENST00000512229 DUOX2Q9NRD8 1548 aa16.43■□□□□ 0.22
PCDHA4-202ENST00000512229 ATF3P18847 181 aa16.43■□□□□ 0.22
PCDHA4-202ENST00000512229 PDE4AP27815 886 aa16.43■□□□□ 0.22
PCDHA4-202ENST00000512229 ABTB2Q8N961 1025 aa16.42■□□□□ 0.22
PCDHA4-202ENST00000512229 API5Q9BZZ5 524 aaKnown RBP16.42■□□□□ 0.22
PCDHA4-202ENST00000512229 C14orf93Q9H972 538 aaKnown RBP16.42■□□□□ 0.22
PCDHA4-202ENST00000512229 FGD1P98174 961 aa16.42■□□□□ 0.22
PCDHA4-202ENST00000512229 IPO9Q96P70 1041 aaKnown RBP16.41■□□□□ 0.22
PCDHA4-202ENST00000512229 KIF16BQ96L93 1317 aa16.41■□□□□ 0.22
PCDHA4-202ENST00000512229 WAPLQ7Z5K2 1190 aa16.41■□□□□ 0.22
PCDHA4-202ENST00000512229 ANKLE2Q86XL3 938 aa16.41■□□□□ 0.22
PCDHA4-202ENST00000512229 MFAP1P55081 439 aaKnown RBP16.41■□□□□ 0.22
PCDHA4-202ENST00000512229 NOS1P29475 1434 aa16.4■□□□□ 0.22
PCDHA4-202ENST00000512229 SPRYD3Q8NCJ5 442 aa16.4■□□□□ 0.22
PCDHA4-202ENST00000512229 NSD3Q9BZ95 1437 aa16.39■□□□□ 0.22
PCDHA4-202ENST00000512229 ABCC2Q92887 1545 aa16.39■□□□□ 0.22
PCDHA4-202ENST00000512229 KIAA1211Q6ZU35 1233 aa16.39■□□□□ 0.21
PCDHA4-202ENST00000512229 PROSER2Q86WR7 435 aaPredicted RBP16.39■□□□□ 0.21
PCDHA4-202ENST00000512229 SCAF11Q99590 1463 aaKnown RBP16.39■□□□□ 0.21
PCDHA4-202ENST00000512229 FAM161AQ3B820 660 aa16.39■□□□□ 0.21
PCDHA4-202ENST00000512229 A2MP01023 1474 aa16.39■□□□□ 0.21
PCDHA4-202ENST00000512229 ESCO1Q5FWF5 840 aa16.39■□□□□ 0.21
PCDHA4-202ENST00000512229 ANKRD45Q5TZF3 282 aa16.39■□□□□ 0.21
PCDHA4-202ENST00000512229 PANK1Q8TE04 598 aa16.39■□□□□ 0.21
PCDHA4-202ENST00000512229 SHANK2Q9UPX8 1470 aa16.39■□□□□ 0.21
PCDHA4-202ENST00000512229 NUDT16Q96DE0 195 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms