RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 CFDP1Q9UEE9 299 aaPredicted RBP16■□□□□ 0.15
PTPN20-221ENST00000509599 CASKIN1Q8WXD9 1431 aa16■□□□□ 0.15
PTPN20-221ENST00000509599 SLIT1O75093 1534 aa15.99■□□□□ 0.15
PTPN20-221ENST00000509599 MBD5Q9P267 1494 aa15.99■□□□□ 0.15
PTPN20-221ENST00000509599 PRKAR2AP13861 404 aaKnown RBP15.99■□□□□ 0.15
PTPN20-221ENST00000509599 RXRBP28702 533 aa15.99■□□□□ 0.15
PTPN20-221ENST00000509599 SHPRHQ149N8 1683 aa15.99■□□□□ 0.15
PTPN20-221ENST00000509599 ERVK-7P63135 1459 aa15.98■□□□□ 0.15
PTPN20-221ENST00000509599 TIAM1Q13009 1591 aa15.97■□□□□ 0.15
PTPN20-221ENST00000509599 SETBP1Q9Y6X0 1596 aa15.97■□□□□ 0.15
PTPN20-221ENST00000509599 RBM33Q96EV2 1170 aaKnown RBP15.97■□□□□ 0.15
PTPN20-221ENST00000509599 SPATA31A6Q5VVP1 1343 aa15.96■□□□□ 0.15
PTPN20-221ENST00000509599 MEX3CQ5U5Q3 659 aaKnown RBP15.96■□□□□ 0.15
PTPN20-221ENST00000509599 TXNDC2Q86VQ3 553 aa15.96■□□□□ 0.15
PTPN20-221ENST00000509599 ZNF644Q9H582 1327 aaPredicted RBP15.95■□□□□ 0.14
PTPN20-221ENST00000509599 FGD6Q6ZV73 1430 aa15.94■□□□□ 0.14
PTPN20-221ENST00000509599 ABCC3O15438 1527 aa15.94■□□□□ 0.14
PTPN20-221ENST00000509599 PRDM15P57071 1507 aaPredicted RBP15.94■□□□□ 0.14
PTPN20-221ENST00000509599 CCNB3Q8WWL7 1395 aa15.93■□□□□ 0.14
PTPN20-221ENST00000509599 UBTFP17480 764 aaKnown RBP15.93■□□□□ 0.14
PTPN20-221ENST00000509599 SLAIN2Q9P270 581 aa15.93■□□□□ 0.14
PTPN20-221ENST00000509599 RGS12O14924 1447 aa15.93■□□□□ 0.14
PTPN20-221ENST00000509599 CEP152O94986 1710 aa15.92■□□□□ 0.14
PTPN20-221ENST00000509599 PROSER2Q86WR7 435 aaPredicted RBP15.92■□□□□ 0.14
PTPN20-221ENST00000509599 NWD1Q149M9 1564 aa15.92■□□□□ 0.14
PTPN20-221ENST00000509599 KCNA6P17658 529 aa15.91■□□□□ 0.14
PTPN20-221ENST00000509599 KDM5AP29375 1690 aaKnown RBP15.9■□□□□ 0.14
PTPN20-221ENST00000509599 NKTRP30414 1462 aaKnown RBP15.9■□□□□ 0.14
PTPN20-221ENST00000509599 MSH6P52701 1360 aa15.89■□□□□ 0.13
PTPN20-221ENST00000509599 FYCO1Q9BQS8 1478 aa15.89■□□□□ 0.13
PTPN20-221ENST00000509599 TET3O43151 1660 aa15.89■□□□□ 0.13
PTPN20-221ENST00000509599 PIK3C2BO00750 1634 aa15.88■□□□□ 0.13
PTPN20-221ENST00000509599 AHDC1Q5TGY3 1603 aaPredicted RBP15.88■□□□□ 0.13
PTPN20-221ENST00000509599 ZRANB1Q9UGI0 708 aa15.88■□□□□ 0.13
PTPN20-221ENST00000509599 MROH1Q8NDA8 1641 aa15.86■□□□□ 0.13
PTPN20-221ENST00000509599 CAMSAP2Q08AD1 1489 aa15.86■□□□□ 0.13
PTPN20-221ENST00000509599 EVX2Q03828 476 aa15.86■□□□□ 0.13
PTPN20-221ENST00000509599 EID1Q9Y6B2 187 aa15.86■□□□□ 0.13
PTPN20-221ENST00000509599 DIP2AQ14689 1571 aa15.86■□□□□ 0.13
PTPN20-221ENST00000509599 AFF2P51816 1311 aa15.86■□□□□ 0.13
PTPN20-221ENST00000509599 CCDC141Q6ZP82 1450 aa15.85■□□□□ 0.13
PTPN20-221ENST00000509599 PRR29P0C7W0 189 aa15.84■□□□□ 0.13
PTPN20-221ENST00000509599 CHD2O14647 1828 aaKnown RBP15.84■□□□□ 0.13
PTPN20-221ENST00000509599 TMEM2Q9UHN6 1383 aa15.84■□□□□ 0.13
PTPN20-221ENST00000509599 NUTM2BA6NNL0 878 aaPredicted RBP15.83■□□□□ 0.12
PTPN20-221ENST00000509599 NUTM2EB1AL46 878 aaPredicted RBP15.83■□□□□ 0.12
PTPN20-221ENST00000509599 NUTM2DQ5VT03 806 aaPredicted RBP15.83■□□□□ 0.12
PTPN20-221ENST00000509599 NUTM2AQ8IVF1 878 aaPredicted RBP15.83■□□□□ 0.12
PTPN20-221ENST00000509599 SLC26A8Q96RN1 970 aa15.83■□□□□ 0.12
PTPN20-221ENST00000509599 CHADLQ6NUI6 762 aa15.82■□□□□ 0.12
PTPN20-221ENST00000509599 EP400Q96L91 3159 aa15.82■□□□□ 0.12
PTPN20-221ENST00000509599 RBM6P78332 1123 aaKnown RBP15.81■□□□□ 0.12
PTPN20-221ENST00000509599 EIF2AK4Q9P2K8 1649 aaKnown RBP15.8■□□□□ 0.12
PTPN20-221ENST00000509599 ATAD2Q6PL18 1390 aa15.8■□□□□ 0.12
PTPN20-221ENST00000509599 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.8■□□□□ 0.12
PTPN20-221ENST00000509599 QTRT2Q9H974 415 aaKnown RBP15.78■□□□□ 0.12
PTPN20-221ENST00000509599 LRP5O75197 1615 aa15.78■□□□□ 0.12
PTPN20-221ENST00000509599 MAST1Q9Y2H9 1570 aa15.78■□□□□ 0.12
PTPN20-221ENST00000509599 EFCAB6Q5THR3 1501 aa15.78■□□□□ 0.12
PTPN20-221ENST00000509599 MTUS2Q5JR59 1369 aa15.76■□□□□ 0.11
PTPN20-221ENST00000509599 ARHGEF5Q12774 1597 aa15.75■□□□□ 0.11
PTPN20-221ENST00000509599 ARHGAP31Q2M1Z3 1444 aa15.74■□□□□ 0.11
PTPN20-221ENST00000509599 RSPH4AQ5TD94 716 aa15.72■□□□□ 0.11
PTPN20-221ENST00000509599 C8orf37Q96NL8 207 aa15.72■□□□□ 0.11
PTPN20-221ENST00000509599 NHSL1Q5SYE7 1610 aa15.72■□□□□ 0.11
PTPN20-221ENST00000509599 C19orf67A6NJJ6 358 aa15.71■□□□□ 0.11
PTPN20-221ENST00000509599 EHBP1L1Q8N3D4 1523 aa15.71■□□□□ 0.11
PTPN20-221ENST00000509599 NCOA3Q9Y6Q9 1424 aa15.7■□□□□ 0.1
PTPN20-221ENST00000509599 STAG3Q9UJ98 1225 aa15.7■□□□□ 0.1
PTPN20-221ENST00000509599 SETD5Q9C0A6 1442 aa15.69■□□□□ 0.1
PTPN20-221ENST00000509599 MYO5BQ9ULV0 1848 aa15.69■□□□□ 0.1
PTPN20-221ENST00000509599 BRINP3Q76B58 766 aa15.69■□□□□ 0.1
PTPN20-221ENST00000509599 NGLY1Q96IV0 654 aa15.69■□□□□ 0.1
PTPN20-221ENST00000509599 CEP162Q5TB80 1403 aa15.68■□□□□ 0.1
PTPN20-221ENST00000509599 IDI1Q13907 227 aa15.67■□□□□ 0.1
PTPN20-221ENST00000509599 CADPS2Q86UW7 1296 aa15.67■□□□□ 0.1
PTPN20-221ENST00000509599 ADGRB3O60242 1522 aa15.67■□□□□ 0.1
PTPN20-221ENST00000509599 ASXL1Q8IXJ9 1541 aa15.67■□□□□ 0.1
PTPN20-221ENST00000509599 TSPY4P0CV99 314 aa15.66■□□□□ 0.1
PTPN20-221ENST00000509599 TSPY10P0CW01 314 aa15.66■□□□□ 0.1
PTPN20-221ENST00000509599 CCDC125Q86Z20 511 aa15.66■□□□□ 0.1
PTPN20-221ENST00000509599 C14orf37Q86TY3 774 aa15.65■□□□□ 0.1
PTPN20-221ENST00000509599 PNPLA6Q8IY17 1366 aa15.64■□□□□ 0.09
PTPN20-221ENST00000509599 ATF3P18847 181 aa15.64■□□□□ 0.09
PTPN20-221ENST00000509599 BCANQ96GW7 911 aa15.64■□□□□ 0.09
PTPN20-221ENST00000509599 C19orf44Q9H6X5 657 aa15.64■□□□□ 0.09
PTPN20-221ENST00000509599 SPDYE4A6NLX3 237 aa15.61■□□□□ 0.09
PTPN20-221ENST00000509599 PLEKHG1Q9ULL1 1385 aa15.61■□□□□ 0.09
PTPN20-221ENST00000509599 ZFYVE9O95405 1425 aa15.6■□□□□ 0.09
PTPN20-221ENST00000509599 DUOX2Q9NRD8 1548 aa15.6■□□□□ 0.09
PTPN20-221ENST00000509599 LRRC59Q96AG4 307 aaKnown RBP15.6■□□□□ 0.09
PTPN20-221ENST00000509599 ADAMTS2O95450 1211 aa15.59■□□□□ 0.09
PTPN20-221ENST00000509599 ATRNO75882 1429 aa15.59■□□□□ 0.09
PTPN20-221ENST00000509599 USP21Q9UK80 565 aa15.58■□□□□ 0.08
PTPN20-221ENST00000509599 TRPC5Q9UL62 973 aaPredicted RBP15.58■□□□□ 0.08
PTPN20-221ENST00000509599 GCC2Q8IWJ2 1684 aa15.57■□□□□ 0.08
PTPN20-221ENST00000509599 BRWD3Q6RI45 1802 aa15.57■□□□□ 0.08
PTPN20-221ENST00000509599 DDX17Q92841 729 aaKnown RBP15.56■□□□□ 0.08
PTPN20-221ENST00000509599 TBX22Q9Y458 520 aa15.56■□□□□ 0.08
PTPN20-221ENST00000509599 FARP1Q9Y4F1 1045 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms