RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 PCDHB3Q9Y5E6 796 aa9.77□□□□□ -0.85
GYPB-209ENST00000508618 ADGRG1Q9Y653 693 aa9.77□□□□□ -0.85
GYPB-209ENST00000508618 P3H3Q8IVL6 736 aa9.75□□□□□ -0.85
GYPB-209ENST00000508618 PDZRN3Q9UPQ7 1066 aa9.74□□□□□ -0.85
GYPB-209ENST00000508618 TSHZ2Q9NRE2 1034 aa9.73□□□□□ -0.85
GYPB-209ENST00000508618 ACTN4O43707 911 aaKnown RBP9.72□□□□□ -0.85
GYPB-209ENST00000508618 KMT5BQ4FZB7 885 aa9.72□□□□□ -0.85
GYPB-209ENST00000508618 BLOC1S3Q6QNY0 202 aa9.72□□□□□ -0.85
GYPB-209ENST00000508618 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.7□□□□□ -0.86
GYPB-209ENST00000508618 RCCD1A6NED2 376 aa9.7□□□□□ -0.86
GYPB-209ENST00000508618 FCHSD2O94868 740 aa9.7□□□□□ -0.86
GYPB-209ENST00000508618 RNF223E7ERA6 249 aa9.69□□□□□ -0.86
GYPB-209ENST00000508618 ANKLE1Q8NAG6 615 aa9.69□□□□□ -0.86
GYPB-209ENST00000508618 CFHP08603 1231 aa9.68□□□□□ -0.86
GYPB-209ENST00000508618 TLL1O43897 1013 aa9.67□□□□□ -0.86
GYPB-209ENST00000508618 NUTM2FA1L443 756 aa9.66□□□□□ -0.86
GYPB-209ENST00000508618 SLC19A1P41440 591 aa9.66□□□□□ -0.86
GYPB-209ENST00000508618 PRR20EP86478 221 aa9.66□□□□□ -0.86
GYPB-209ENST00000508618 PRR20CP86479 221 aa9.66□□□□□ -0.86
GYPB-209ENST00000508618 PRR20DP86480 221 aa9.66□□□□□ -0.86
GYPB-209ENST00000508618 PRR20BP86481 221 aa9.66□□□□□ -0.86
GYPB-209ENST00000508618 PRR20AP86496 221 aa9.66□□□□□ -0.86
GYPB-209ENST00000508618 TRIM67Q6ZTA4 783 aa9.66□□□□□ -0.86
GYPB-209ENST00000508618 ADH1BP00325 375 aa9.65□□□□□ -0.86
GYPB-209ENST00000508618 OATP04181 439 aa9.65□□□□□ -0.86
GYPB-209ENST00000508618 EMID1Q96A84 441 aaPredicted RBP9.65□□□□□ -0.86
GYPB-209ENST00000508618 NR1I2O75469 434 aa9.64□□□□□ -0.87
GYPB-209ENST00000508618 PXYLP1Q8TE99 480 aa9.64□□□□□ -0.87
GYPB-209ENST00000508618 SLC10A3P09131 477 aa9.63□□□□□ -0.87
GYPB-209ENST00000508618 HIC1Q14526 733 aa9.63□□□□□ -0.87
GYPB-209ENST00000508618 SPRYD7Q5W111 196 aa9.63□□□□□ -0.87
GYPB-209ENST00000508618 S1PR4O95977 384 aa9.62□□□□□ -0.87
GYPB-209ENST00000508618 ZNF598Q86UK7 904 aaKnown RBP9.62□□□□□ -0.87
GYPB-209ENST00000508618 SEMA3EO15041 775 aa9.61□□□□□ -0.87
GYPB-209ENST00000508618 FAM161AQ3B820 660 aa9.61□□□□□ -0.87
GYPB-209ENST00000508618 METTL3Q86U44 580 aaKnown RBP9.61□□□□□ -0.87
GYPB-209ENST00000508618 DGAT1O75907 488 aa9.59□□□□□ -0.87
GYPB-209ENST00000508618 RSPH4AQ5TD94 716 aa9.59□□□□□ -0.87
GYPB-209ENST00000508618 ZNF787Q6DD87 383 aa9.58□□□□□ -0.88
GYPB-209ENST00000508618 TESPA1A2RU30 521 aaPredicted RBP9.57□□□□□ -0.88
GYPB-209ENST00000508618 PKDCCQ504Y2 493 aa9.57□□□□□ -0.88
GYPB-209ENST00000508618 ZNF697Q5TEC3 545 aa9.57□□□□□ -0.88
GYPB-209ENST00000508618 SLC6A16Q9GZN6 736 aa9.57□□□□□ -0.88
GYPB-209ENST00000508618 LMOD2Q6P5Q4 547 aa9.56□□□□□ -0.88
GYPB-209ENST00000508618 LIAT1Q6ZQX7 453 aa9.56□□□□□ -0.88
GYPB-209ENST00000508618 GDF9O60383 454 aa9.55□□□□□ -0.88
GYPB-209ENST00000508618 PPEF1O14829 653 aaPredicted RBP9.54□□□□□ -0.88
GYPB-209ENST00000508618 GNPATO15228 680 aa9.54□□□□□ -0.88
GYPB-209ENST00000508618 GPR37O15354 613 aa9.54□□□□□ -0.88
GYPB-209ENST00000508618 SMYD5Q6GMV2 418 aa9.54□□□□□ -0.88
GYPB-209ENST00000508618 SCUBE3Q8IX30 993 aa9.54□□□□□ -0.88
GYPB-209ENST00000508618 MYT1Q01538 1121 aa9.53□□□□□ -0.88
GYPB-209ENST00000508618 DAXXQ9UER7 740 aaPredicted RBP9.53□□□□□ -0.88
GYPB-209ENST00000508618 PLA2G2CQ5R387 149 aa9.52□□□□□ -0.89
GYPB-209ENST00000508618 SPSB2Q99619 263 aa9.52□□□□□ -0.89
GYPB-209ENST00000508618 RPIAP49247 311 aa9.5□□□□□ -0.89
GYPB-209ENST00000508618 MORN1Q5T089 497 aa9.5□□□□□ -0.89
GYPB-209ENST00000508618 RBM26Q5T8P6 1007 aaKnown RBP9.49□□□□□ -0.89
GYPB-209ENST00000508618 THAP11Q96EK4 314 aa9.49□□□□□ -0.89
GYPB-209ENST00000508618 FAM187AA6NFU0 413 aa9.48□□□□□ -0.89
GYPB-209ENST00000508618 PUS10Q3MIT2 529 aaKnown RBP9.48□□□□□ -0.89
GYPB-209ENST00000508618 SULF1Q8IWU6 871 aa9.48□□□□□ -0.89
GYPB-209ENST00000508618 SALL2Q9Y467 1007 aaPredicted RBP9.48□□□□□ -0.89
GYPB-209ENST00000508618 TNFRSF10AO00220 468 aa9.47□□□□□ -0.89
GYPB-209ENST00000508618 ZNF775Q96BV0 537 aaPredicted RBP9.47□□□□□ -0.89
GYPB-209ENST00000508618 ATP6V1AP38606 617 aa9.46□□□□□ -0.9
GYPB-209ENST00000508618 CRIPAKQ8N1N5 446 aa9.46□□□□□ -0.9
GYPB-209ENST00000508618 RDH13Q8NBN7 331 aa9.46□□□□□ -0.9
GYPB-209ENST00000508618 PKD2L1Q9P0L9 805 aa9.46□□□□□ -0.9
GYPB-209ENST00000508618 FECHP22830 423 aa9.45□□□□□ -0.9
GYPB-209ENST00000508618 FUT2Q10981 343 aa9.45□□□□□ -0.9
GYPB-209ENST00000508618 FMNL1O95466 1100 aaPredicted RBP9.44□□□□□ -0.9
GYPB-209ENST00000508618 GCGRP47871 477 aa9.44□□□□□ -0.9
GYPB-209ENST00000508618 PLCB2Q00722 1185 aa9.44□□□□□ -0.9
GYPB-209ENST00000508618 DDX11L8A8MPP1 907 aa9.43□□□□□ -0.9
GYPB-209ENST00000508618 MSS51Q4VC12 460 aa9.43□□□□□ -0.9
GYPB-209ENST00000508618 FCF1Q9Y324 198 aaKnown RBP9.43□□□□□ -0.9
GYPB-209ENST00000508618 SLC27A5Q9Y2P5 690 aa9.42□□□□□ -0.9
GYPB-209ENST00000508618 AVPP01185 164 aa9.41□□□□□ -0.9
GYPB-209ENST00000508618 PHOX2BQ99453 314 aa9.41□□□□□ -0.9
GYPB-209ENST00000508618 AAASQ9NRG9 546 aa9.41□□□□□ -0.9
GYPB-209ENST00000508618 BRICD5Q6PL45 260 aa9.4□□□□□ -0.9
GYPB-209ENST00000508618 FAM160A2Q8N612 972 aaPredicted RBP9.4□□□□□ -0.9
GYPB-209ENST00000508618 TOR4AQ9NXH8 423 aa9.4□□□□□ -0.9
GYPB-209ENST00000508618 CD2BP2O95400 341 aaKnown RBP9.39□□□□□ -0.91
GYPB-209ENST00000508618 GRIPAP1Q4V328 841 aa9.39□□□□□ -0.91
GYPB-209ENST00000508618 GPIHBP1Q8IV16 184 aa9.39□□□□□ -0.91
GYPB-209ENST00000508618 ST8SIA5O15466 376 aa9.38□□□□□ -0.91
GYPB-209ENST00000508618 POTECB2RU33 542 aa9.37□□□□□ -0.91
GYPB-209ENST00000508618 CTC1Q2NKJ3 1217 aa9.37□□□□□ -0.91
GYPB-209ENST00000508618 PRDM9Q9NQV7 894 aa9.37□□□□□ -0.91
GYPB-209ENST00000508618 SMCPP49901 116 aaPredicted RBP9.36□□□□□ -0.91
GYPB-209ENST00000508618 FOXC1Q12948 553 aa9.36□□□□□ -0.91
GYPB-209ENST00000508618 Q3C1V9 767 aa9.36□□□□□ -0.91
GYPB-209ENST00000508618 NLRP7Q8WX94 980 aa9.36□□□□□ -0.91
GYPB-209ENST00000508618 MMP16P51512 607 aa9.34□□□□□ -0.91
GYPB-209ENST00000508618 MAP2K5Q13163 448 aa9.34□□□□□ -0.91
GYPB-209ENST00000508618 RNF19BQ6ZMZ0 732 aa9.34□□□□□ -0.91
GYPB-209ENST00000508618 CYP4X1Q8N118 509 aa9.34□□□□□ -0.91
GYPB-209ENST00000508618 CD46P15529 392 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms