RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 BACH2Q9BYV9 841 aa16.56■□□□□ 0.24
SMG7-214ENST00000508461 SLKQ9H2G2 1235 aaPredicted RBP16.56■□□□□ 0.24
SMG7-214ENST00000508461 TRAPPC8Q9Y2L5 1435 aa16.56■□□□□ 0.24
SMG7-214ENST00000508461 CABP2Q9NPB3 220 aa16.55■□□□□ 0.24
SMG7-214ENST00000508461 MINK1Q8N4C8 1332 aaPredicted RBP16.55■□□□□ 0.24
SMG7-214ENST00000508461 ABCC10Q5T3U5 1492 aa16.55■□□□□ 0.24
SMG7-214ENST00000508461 MS4A1P11836 297 aa16.54■□□□□ 0.24
SMG7-214ENST00000508461 SHANK2Q9UPX8 1470 aa16.54■□□□□ 0.24
SMG7-214ENST00000508461 A2MP01023 1474 aa16.54■□□□□ 0.24
SMG7-214ENST00000508461 MTHFSP49914 203 aa16.54■□□□□ 0.24
SMG7-214ENST00000508461 BCORL1Q5H9F3 1711 aa16.54■□□□□ 0.24
SMG7-214ENST00000508461 SOX12O15370 315 aa16.53■□□□□ 0.24
SMG7-214ENST00000508461 MBD5Q9P267 1494 aa16.53■□□□□ 0.24
SMG7-214ENST00000508461 FAM161AQ3B820 660 aa16.53■□□□□ 0.24
SMG7-214ENST00000508461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.53■□□□□ 0.242e-6■■□□□ 12.3
SMG7-214ENST00000508461 ADGBQ8N7X0 1667 aa16.52■□□□□ 0.24
SMG7-214ENST00000508461 ARHGEF12Q9NZN5 1544 aa16.52■□□□□ 0.24
SMG7-214ENST00000508461 GGNBP2Q9H3C7 697 aa16.52■□□□□ 0.23
SMG7-214ENST00000508461 LRPPRCP42704 1394 aaKnown RBP16.52■□□□□ 0.23
SMG7-214ENST00000508461 RAPGEF3O95398 923 aa16.52■□□□□ 0.23
SMG7-214ENST00000508461 TCP11L2Q8N4U5 519 aa16.52■□□□□ 0.23
SMG7-214ENST00000508461 KDM5CP41229 1560 aa16.51■□□□□ 0.23
SMG7-214ENST00000508461 HSP90AA1P07900 732 aaKnown RBP16.51■□□□□ 0.23
SMG7-214ENST00000508461 AMER1Q5JTC6 1135 aaPredicted RBP16.51■□□□□ 0.23
SMG7-214ENST00000508461 DUSP27Q5VZP5 1158 aa16.51■□□□□ 0.23
SMG7-214ENST00000508461 SMC4Q9NTJ3 1288 aa16.51■□□□□ 0.23
SMG7-214ENST00000508461 BECN1Q14457 450 aa16.51■□□□□ 0.23
SMG7-214ENST00000508461 ITPRIPQ8IWB1 547 aa16.51■□□□□ 0.23
SMG7-214ENST00000508461 CGNL1Q0VF96 1302 aa16.5■□□□□ 0.23
SMG7-214ENST00000508461 PLEKHG5O94827 1062 aa16.5■□□□□ 0.23
SMG7-214ENST00000508461 SLFN5Q08AF3 891 aa16.48■□□□□ 0.23
SMG7-214ENST00000508461 MYH16Q9H6N6 1097 aa16.47■□□□□ 0.23
SMG7-214ENST00000508461 PLCH2O75038 1416 aa16.47■□□□□ 0.23
SMG7-214ENST00000508461 ABCA8O94911 1581 aa16.47■□□□□ 0.23
SMG7-214ENST00000508461 EVC2Q86UK5 1308 aa16.47■□□□□ 0.23
SMG7-214ENST00000508461 ELL2O00472 640 aaPredicted RBP16.47■□□□□ 0.23
SMG7-214ENST00000508461 VGFO15240 615 aaPredicted RBP16.47■□□□□ 0.23
SMG7-214ENST00000508461 RNF123Q5XPI4 1314 aa16.47■□□□□ 0.23
SMG7-214ENST00000508461 STAC3Q96MF2 364 aa16.46■□□□□ 0.23
SMG7-214ENST00000508461 PLEKHH1Q9ULM0 1364 aa16.46■□□□□ 0.23
SMG7-214ENST00000508461 RUNDC1Q96C34 613 aa16.46■□□□□ 0.23
SMG7-214ENST00000508461 NUTM2FA1L443 756 aa16.46■□□□□ 0.23
SMG7-214ENST00000508461 SPINK5Q9NQ38 1064 aaPredicted RBP16.45■□□□□ 0.22
SMG7-214ENST00000508461 CYB5RLQ6IPT4 315 aa16.45■□□□□ 0.22
SMG7-214ENST00000508461 HDGFL2Q7Z4V5 671 aaPredicted RBP16.45■□□□□ 0.22
SMG7-214ENST00000508461 CDC42BPAQ5VT25 1732 aa16.44■□□□□ 0.22
SMG7-214ENST00000508461 COL17A1Q9UMD9 1497 aaPredicted RBP16.44■□□□□ 0.22
SMG7-214ENST00000508461 SAMD9LQ8IVG5 1584 aa16.44■□□□□ 0.22
SMG7-214ENST00000508461 TSR2Q969E8 191 aaKnown RBP16.44■□□□□ 0.22
SMG7-214ENST00000508461 OSCARQ8IYS5 282 aa16.43■□□□□ 0.22
SMG7-214ENST00000508461 SCAF11Q99590 1463 aaKnown RBP16.43■□□□□ 0.22
SMG7-214ENST00000508461 EIF5BO60841 1220 aaKnown RBP16.43■□□□□ 0.22
SMG7-214ENST00000508461 WWC1Q8IX03 1113 aa16.43■□□□□ 0.22
SMG7-214ENST00000508461 RWDD1Q9H446 243 aaPredicted RBP16.43■□□□□ 0.22
SMG7-214ENST00000508461 DUOX2Q9NRD8 1548 aa16.43■□□□□ 0.22
SMG7-214ENST00000508461 MFAP1P55081 439 aaKnown RBP16.42■□□□□ 0.22
SMG7-214ENST00000508461 ADGRL1O94910 1474 aa16.42■□□□□ 0.22
SMG7-214ENST00000508461 NSD3Q9BZ95 1437 aa16.42■□□□□ 0.22
SMG7-214ENST00000508461 TERF2IPQ9NYB0 399 aa16.42■□□□□ 0.22
SMG7-214ENST00000508461 FANCAO15360 1455 aa16.42■□□□□ 0.22
SMG7-214ENST00000508461 PLA2R1Q13018 1463 aa16.42■□□□□ 0.22
SMG7-214ENST00000508461 PMFBP1Q8TBY8 1022 aa16.41■□□□□ 0.22
SMG7-214ENST00000508461 CARD14Q9BXL6 1004 aa16.41■□□□□ 0.22
SMG7-214ENST00000508461 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.4■□□□□ 0.221e-5■■■■□ 25.8
SMG7-214ENST00000508461 DMRT2Q9Y5R5 561 aa16.39■□□□□ 0.21
SMG7-214ENST00000508461 NOS1P29475 1434 aa16.39■□□□□ 0.21
SMG7-214ENST00000508461 TTC37Q6PGP7 1564 aa16.38■□□□□ 0.21
SMG7-214ENST00000508461 APBB1O00213 710 aa16.38■□□□□ 0.21
SMG7-214ENST00000508461 RIPK4P57078 832 aa16.38■□□□□ 0.21
SMG7-214ENST00000508461 NFKBIBQ15653 356 aa16.38■□□□□ 0.21
SMG7-214ENST00000508461 ZKSCAN2Q63HK3 967 aa16.37■□□□□ 0.21
SMG7-214ENST00000508461 HMOX1P09601 288 aa16.37■□□□□ 0.21
SMG7-214ENST00000508461 GPRASP1Q5JY77 1395 aa16.37■□□□□ 0.21
SMG7-214ENST00000508461 PRAM1Q96QH2 718 aa16.37■□□□□ 0.21
SMG7-214ENST00000508461 ERCC6L2Q5T890 1561 aa16.36■□□□□ 0.21
SMG7-214ENST00000508461 ABCC2Q92887 1545 aa16.36■□□□□ 0.21
SMG7-214ENST00000508461 GZF1Q9H116 711 aaPredicted RBP16.36■□□□□ 0.21
SMG7-214ENST00000508461 ARHGEF5Q12774 1597 aa16.35■□□□□ 0.21
SMG7-214ENST00000508461 EXOSC9Q06265 439 aaKnown RBP16.35■□□□□ 0.21
SMG7-214ENST00000508461 C14orf37Q86TY3 774 aa16.35■□□□□ 0.21
SMG7-214ENST00000508461 ZBTB7CA1YPR0 619 aa16.35■□□□□ 0.21
SMG7-214ENST00000508461 CFAP65Q6ZU64 1925 aaKnown RBP16.35■□□□□ 0.21
SMG7-214ENST00000508461 IGHDP01880 384 aa16.35■□□□□ 0.21
SMG7-214ENST00000508461 DZIP1LQ8IYY4 767 aaKnown RBP16.35■□□□□ 0.21
SMG7-214ENST00000508461 TNNQ9UQP3 1299 aa16.35■□□□□ 0.21
SMG7-214ENST00000508461 MAGI2Q86UL8 1455 aa16.34■□□□□ 0.21
SMG7-214ENST00000508461 KDM5DQ9BY66 1539 aa16.34■□□□□ 0.21
SMG7-214ENST00000508461 DIAPH1O60610 1272 aaKnown RBP16.33■□□□□ 0.2
SMG7-214ENST00000508461 FRAT2O75474 233 aaPredicted RBP16.32■□□□□ 0.2
SMG7-214ENST00000508461 FBLN1P23142 703 aa16.32■□□□□ 0.2
SMG7-214ENST00000508461 PDZRN3Q9UPQ7 1066 aa16.32■□□□□ 0.2
SMG7-214ENST00000508461 PDE3AQ14432 1141 aa16.32■□□□□ 0.2
SMG7-214ENST00000508461 USP35Q9P2H5 1018 aa16.32■□□□□ 0.2
SMG7-214ENST00000508461 ADCY10Q96PN6 1610 aa16.32■□□□□ 0.2
SMG7-214ENST00000508461 ASXL1Q8IXJ9 1541 aa16.32■□□□□ 0.2
SMG7-214ENST00000508461 NKTRP30414 1462 aaKnown RBP16.31■□□□□ 0.2
SMG7-214ENST00000508461 IPO8O15397 1037 aaKnown RBP16.31■□□□□ 0.2
SMG7-214ENST00000508461 PNNQ9H307 717 aaKnown RBP16.31■□□□□ 0.2
SMG7-214ENST00000508461 CROCC2H7BZ55 1655 aa16.31■□□□□ 0.2
SMG7-214ENST00000508461 IDI1Q13907 227 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms