RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 RICTORQ6R327 1708 aa8.11□□□□□ -1.11
KDM3B-204ENST00000507996 ANKRD30BQ9BXX2 1392 aa8.11□□□□□ -1.11
KDM3B-204ENST00000507996 RNF216Q9NWF9 866 aaPredicted RBP8.11□□□□□ -1.11
KDM3B-204ENST00000507996 ABCA6Q8N139 1617 aa8.11□□□□□ -1.11
KDM3B-204ENST00000507996 KDM2AQ9Y2K7 1162 aa8.11□□□□□ -1.11
KDM3B-204ENST00000507996 L3MBTL2Q969R5 705 aa8.1□□□□□ -1.11
KDM3B-204ENST00000507996 FRMPD1Q5SYB0 1578 aa8.1□□□□□ -1.11
KDM3B-204ENST00000507996 NFKBIBQ15653 356 aa8.1□□□□□ -1.11
KDM3B-204ENST00000507996 BACH2Q9BYV9 841 aa8.1□□□□□ -1.11
KDM3B-204ENST00000507996 LAS1LQ9Y4W2 734 aaKnown RBP8.09□□□□□ -1.11
KDM3B-204ENST00000507996 HIRIP3Q9BW71 556 aaPredicted RBP8.09□□□□□ -1.11
KDM3B-204ENST00000507996 CHGAP10645 457 aaKnown RBP8.08□□□□□ -1.12
KDM3B-204ENST00000507996 DIP2CQ9Y2E4 1556 aa8.08□□□□□ -1.12
KDM3B-204ENST00000507996 HSP90AA2PQ14568 343 aaPredicted RBP8.08□□□□□ -1.12
KDM3B-204ENST00000507996 UNC13BO14795 1591 aa8.08□□□□□ -1.12
KDM3B-204ENST00000507996 ESF1Q9H501 851 aaKnown RBP8.08□□□□□ -1.12
KDM3B-204ENST00000507996 CCDC144AA2RUR9 1427 aa8.07□□□□□ -1.12
KDM3B-204ENST00000507996 ATP10AO60312 1499 aa8.07□□□□□ -1.12
KDM3B-204ENST00000507996 CFAP65Q6ZU64 1925 aaKnown RBP8.07□□□□□ -1.12
KDM3B-204ENST00000507996 DCAF11Q8TEB1 546 aa8.07□□□□□ -1.12
KDM3B-204ENST00000507996 KDM5DQ9BY66 1539 aa8.07□□□□□ -1.12
KDM3B-204ENST00000507996 VIRMAQ69YN4 1812 aaKnown RBP8.07□□□□□ -1.12
KDM3B-204ENST00000507996 PDE4AP27815 886 aa8.06□□□□□ -1.12
KDM3B-204ENST00000507996 AAMPQ13685 434 aa8.06□□□□□ -1.12
KDM3B-204ENST00000507996 IQGAP3Q86VI3 1631 aa8.06□□□□□ -1.12
KDM3B-204ENST00000507996 CALD1Q05682 793 aaKnown RBP8.06□□□□□ -1.12
KDM3B-204ENST00000507996 NUDCQ9Y266 331 aa8.06□□□□□ -1.12
KDM3B-204ENST00000507996 RPRD2Q5VT52 1461 aaKnown RBP8.06□□□□□ -1.12
KDM3B-204ENST00000507996 FGD1P98174 961 aa8.05□□□□□ -1.12
KDM3B-204ENST00000507996 RRAGDQ9NQL2 400 aaPredicted RBP8.05□□□□□ -1.12
KDM3B-204ENST00000507996 MAGI2Q86UL8 1455 aa8.05□□□□□ -1.12
KDM3B-204ENST00000507996 HSP90AA1P07900 732 aaKnown RBP8.05□□□□□ -1.12
KDM3B-204ENST00000507996 CLCN1P35523 988 aa8.05□□□□□ -1.12
KDM3B-204ENST00000507996 EIF2AK4Q9P2K8 1649 aaKnown RBP8.04□□□□□ -1.12
KDM3B-204ENST00000507996 ZMYM4Q5VZL5 1548 aa8.04□□□□□ -1.12
KDM3B-204ENST00000507996 SIGLEC1Q9BZZ2 1709 aa8.04□□□□□ -1.12
KDM3B-204ENST00000507996 CEP152O94986 1710 aa8.04□□□□□ -1.12
KDM3B-204ENST00000507996 TAOK2Q9UL54 1235 aa8.03□□□□□ -1.12
KDM3B-204ENST00000507996 E9PCH4 1651 aa8.03□□□□□ -1.12
KDM3B-204ENST00000507996 PLA2R1Q13018 1463 aa8.03□□□□□ -1.12
KDM3B-204ENST00000507996 DEPDC5O75140 1603 aa8.03□□□□□ -1.12
KDM3B-204ENST00000507996 MROH1Q8NDA8 1641 aa8.03□□□□□ -1.12
KDM3B-204ENST00000507996 NBPF8Q3BBV2 869 aa8.03□□□□□ -1.12
KDM3B-204ENST00000507996 FBXO31Q5XUX0 539 aaPredicted RBP8.03□□□□□ -1.12
KDM3B-204ENST00000507996 PRDM15P57071 1507 aaPredicted RBP8.03□□□□□ -1.12
KDM3B-204ENST00000507996 RBM10P98175 930 aaKnown RBP8.03□□□□□ -1.12
KDM3B-204ENST00000507996 PRDM4Q9UKN5 801 aa8.03□□□□□ -1.12
KDM3B-204ENST00000507996 L1TD1Q5T7N2 865 aaKnown RBP8.02□□□□□ -1.13
KDM3B-204ENST00000507996 PRKRIP1Q9H875 184 aaPredicted RBP8.02□□□□□ -1.13
KDM3B-204ENST00000507996 NUTM2DQ5VT03 806 aaPredicted RBP8.01□□□□□ -1.13
KDM3B-204ENST00000507996 TET3O43151 1660 aa8.01□□□□□ -1.13
KDM3B-204ENST00000507996 NPATQ14207 1427 aa8.01□□□□□ -1.13
KDM3B-204ENST00000507996 UGGT1Q9NYU2 1555 aa8.01□□□□□ -1.13
KDM3B-204ENST00000507996 STAG3Q9UJ98 1225 aa8□□□□□ -1.13
KDM3B-204ENST00000507996 RNF17Q9BXT8 1623 aaKnown RBP8□□□□□ -1.13
KDM3B-204ENST00000507996 ABCC3O15438 1527 aa8□□□□□ -1.13
KDM3B-204ENST00000507996 ARHGEF40Q8TER5 1519 aa8□□□□□ -1.13
KDM3B-204ENST00000507996 CCDC184Q52MB2 194 aa8□□□□□ -1.13
KDM3B-204ENST00000507996 VWDEQ8N2E2 1590 aa8□□□□□ -1.13
KDM3B-204ENST00000507996 EFCAB6Q5THR3 1501 aa8□□□□□ -1.13
KDM3B-204ENST00000507996 CEBPAP49715 358 aaPredicted RBP8□□□□□ -1.13
KDM3B-204ENST00000507996 PDCL3Q9H2J4 239 aa8□□□□□ -1.13
KDM3B-204ENST00000507996 DMRT2Q9Y5R5 561 aa7.99□□□□□ -1.13
KDM3B-204ENST00000507996 CCDC7Q96M83 1385 aa7.98□□□□□ -1.13
KDM3B-204ENST00000507996 TPM2P07951 284 aa7.98□□□□□ -1.13
KDM3B-204ENST00000507996 PNNQ9H307 717 aaKnown RBP7.98□□□□□ -1.13
KDM3B-204ENST00000507996 SPHKAPQ2M3C7 1700 aa7.98□□□□□ -1.13
KDM3B-204ENST00000507996 HOXD11P31277 338 aaPredicted RBP7.98□□□□□ -1.13
KDM3B-204ENST00000507996 IDI1Q13907 227 aa7.98□□□□□ -1.13
KDM3B-204ENST00000507996 NPM2Q86SE8 214 aaKnown RBP7.98□□□□□ -1.13
KDM3B-204ENST00000507996 POLR3GLQ9BT43 218 aa7.97□□□□□ -1.13
KDM3B-204ENST00000507996 CARD11Q9BXL7 1154 aa7.97□□□□□ -1.13
KDM3B-204ENST00000507996 CAMSAP1Q5T5Y3 1602 aa7.97□□□□□ -1.13
KDM3B-204ENST00000507996 PTPRTO14522 1441 aa7.97□□□□□ -1.13
KDM3B-204ENST00000507996 SLC4A2P04920 1241 aa7.97□□□□□ -1.13
KDM3B-204ENST00000507996 PLCB2Q00722 1185 aa7.97□□□□□ -1.13
KDM3B-204ENST00000507996 PDE4CQ08493 712 aa7.97□□□□□ -1.13
KDM3B-204ENST00000507996 ARXQ96QS3 562 aa7.97□□□□□ -1.13
KDM3B-204ENST00000507996 CLTCQ00610 1675 aaKnown RBP7.97□□□□□ -1.13
KDM3B-204ENST00000507996 TRPM2O94759 1503 aa7.97□□□□□ -1.13
KDM3B-204ENST00000507996 LMTK2Q8IWU2 1503 aa7.97□□□□□ -1.13
KDM3B-204ENST00000507996 CLTCL1P53675 1640 aa7.97□□□□□ -1.13
KDM3B-204ENST00000507996 HSPA5P11021 654 aaKnown RBP7.97□□□□□ -1.13
KDM3B-204ENST00000507996 EIF4G2P78344 907 aaKnown RBP eCLIP7.97□□□□□ -1.13
KDM3B-204ENST00000507996 TPRNQ4KMQ1 711 aa7.97□□□□□ -1.13
KDM3B-204ENST00000507996 MRS2Q9HD23 443 aa7.97□□□□□ -1.13
KDM3B-204ENST00000507996 ZMYM3Q14202 1370 aa7.97□□□□□ -1.13
KDM3B-204ENST00000507996 AGLP35573 1532 aa7.96□□□□□ -1.13
KDM3B-204ENST00000507996 NBPF1Q3BBV0 1214 aa7.96□□□□□ -1.13
KDM3B-204ENST00000507996 NAP1L5Q96NT1 182 aaPredicted RBP7.96□□□□□ -1.13
KDM3B-204ENST00000507996 BCORL1Q5H9F3 1711 aa7.96□□□□□ -1.14
KDM3B-204ENST00000507996 REREQ9P2R6 1566 aa7.95□□□□□ -1.14
KDM3B-204ENST00000507996 ROCK2O75116 1388 aaKnown RBP7.95□□□□□ -1.14
KDM3B-204ENST00000507996 FSD2A1L4K1 749 aa7.95□□□□□ -1.14
KDM3B-204ENST00000507996 HAP1P54257 671 aaPredicted RBP7.95□□□□□ -1.14
KDM3B-204ENST00000507996 RRP1P56182 461 aaKnown RBP7.95□□□□□ -1.14
KDM3B-204ENST00000507996 FRAT2O75474 233 aaPredicted RBP7.95□□□□□ -1.14
KDM3B-204ENST00000507996 SLC52A1Q9NWF4 448 aa7.94□□□□□ -1.14
KDM3B-204ENST00000507996 SPATA31E1Q6ZUB1 1445 aa7.94□□□□□ -1.14
KDM3B-204ENST00000507996 LRPPRCP42704 1394 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms