RNA–Protein interactions for RNA: ENST00000507411.5

CLDND1-214, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 815 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-214ENST00000507411 NCOA2Q15596 1464 aa12.91□□□□□ -0.34
CLDND1-214ENST00000507411 ARHGAP23Q9P227 1491 aa12.91□□□□□ -0.34
CLDND1-214ENST00000507411 SLIT1O75093 1534 aa12.9□□□□□ -0.34
CLDND1-214ENST00000507411 DHX29Q7Z478 1369 aaKnown RBP12.9□□□□□ -0.34
CLDND1-214ENST00000507411 KIAA1107Q9UPP5 1409 aa12.89□□□□□ -0.35
CLDND1-214ENST00000507411 ABCB7O75027 752 aa12.89□□□□□ -0.35
CLDND1-214ENST00000507411 PLEKHH2Q8IVE3 1493 aa12.89□□□□□ -0.35
CLDND1-214ENST00000507411 KDM5AP29375 1690 aaKnown RBP12.88□□□□□ -0.35
CLDND1-214ENST00000507411 DIP2AQ14689 1571 aa12.87□□□□□ -0.35
CLDND1-214ENST00000507411 CSRNP3Q8WYN3 585 aa12.87□□□□□ -0.35
CLDND1-214ENST00000507411 HRCP23327 699 aa12.86□□□□□ -0.35
CLDND1-214ENST00000507411 ERVK-7P63135 1459 aa12.85□□□□□ -0.35
CLDND1-214ENST00000507411 PSDA5PKW4 1024 aaPredicted RBP12.85□□□□□ -0.35
CLDND1-214ENST00000507411 SLC26A8Q96RN1 970 aa12.85□□□□□ -0.35
CLDND1-214ENST00000507411 BLMP54132 1417 aaPredicted RBP12.85□□□□□ -0.35
CLDND1-214ENST00000507411 DEFB132Q7Z7B7 95 aa12.84□□□□□ -0.35
CLDND1-214ENST00000507411 LRRIQ1Q96JM4 1722 aa12.84□□□□□ -0.35
CLDND1-214ENST00000507411 TRPC5Q9UL62 973 aaPredicted RBP12.83□□□□□ -0.36
CLDND1-214ENST00000507411 RTEL1-TNFRSF6BF6WH68 1400 aa12.82□□□□□ -0.36
CLDND1-214ENST00000507411 ZBTB22O15209 634 aa12.82□□□□□ -0.36
CLDND1-214ENST00000507411 SF3B2Q13435 895 aaKnown RBP12.82□□□□□ -0.36
CLDND1-214ENST00000507411 C14orf37Q86TY3 774 aa12.82□□□□□ -0.36
CLDND1-214ENST00000507411 GPATCH8Q9UKJ3 1502 aaKnown RBP12.82□□□□□ -0.36
CLDND1-214ENST00000507411 CFDP1Q9UEE9 299 aaPredicted RBP12.81□□□□□ -0.36
CLDND1-214ENST00000507411 USP21Q9UK80 565 aa12.81□□□□□ -0.36
CLDND1-214ENST00000507411 ADAMTS2O95450 1211 aa12.8□□□□□ -0.36
CLDND1-214ENST00000507411 CADPS2Q86UW7 1296 aa12.8□□□□□ -0.36
CLDND1-214ENST00000507411 TMEM2Q9UHN6 1383 aa12.8□□□□□ -0.36
CLDND1-214ENST00000507411 SETD5Q9C0A6 1442 aa12.79□□□□□ -0.36
CLDND1-214ENST00000507411 ATF3P18847 181 aa12.79□□□□□ -0.36
CLDND1-214ENST00000507411 BCL9LQ86UU0 1499 aa12.78□□□□□ -0.36
CLDND1-214ENST00000507411 BRINP3Q76B58 766 aa12.78□□□□□ -0.36
CLDND1-214ENST00000507411 LRRC59Q96AG4 307 aaKnown RBP12.78□□□□□ -0.36
CLDND1-214ENST00000507411 CFAP65Q6ZU64 1925 aaKnown RBP12.78□□□□□ -0.36
CLDND1-214ENST00000507411 TET3O43151 1660 aa12.77□□□□□ -0.36
CLDND1-214ENST00000507411 CCDC18Q5T9S5 1454 aa12.77□□□□□ -0.37
CLDND1-214ENST00000507411 MAST1Q9Y2H9 1570 aa12.77□□□□□ -0.37
CLDND1-214ENST00000507411 BCANQ96GW7 911 aa12.76□□□□□ -0.37
CLDND1-214ENST00000507411 STAG3Q9UJ98 1225 aa12.76□□□□□ -0.37
CLDND1-214ENST00000507411 ATRNO75882 1429 aa12.76□□□□□ -0.37
CLDND1-214ENST00000507411 NCOA3Q9Y6Q9 1424 aa12.76□□□□□ -0.37
CLDND1-214ENST00000507411 PNPLA6Q8IY17 1366 aa12.75□□□□□ -0.37
CLDND1-214ENST00000507411 POLA2Q14181 598 aa12.74□□□□□ -0.37
CLDND1-214ENST00000507411 C19orf44Q9H6X5 657 aa12.74□□□□□ -0.37
CLDND1-214ENST00000507411 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.74□□□□□ -0.37
CLDND1-214ENST00000507411 CAMSAP2Q08AD1 1489 aa12.73□□□□□ -0.37
CLDND1-214ENST00000507411 C1QTNF8P60827 252 aa12.73□□□□□ -0.37
CLDND1-214ENST00000507411 MROH1Q8NDA8 1641 aa12.73□□□□□ -0.37
CLDND1-214ENST00000507411 CCNB3Q8WWL7 1395 aa12.72□□□□□ -0.37
CLDND1-214ENST00000507411 EHMT2Q96KQ7 1210 aa12.72□□□□□ -0.37
CLDND1-214ENST00000507411 PIK3C2BO00750 1634 aa12.72□□□□□ -0.37
CLDND1-214ENST00000507411 ASXL1Q8IXJ9 1541 aa12.72□□□□□ -0.37
CLDND1-214ENST00000507411 ARHGAP35Q9NRY4 1499 aa12.72□□□□□ -0.37
CLDND1-214ENST00000507411 MBD5Q9P267 1494 aa12.72□□□□□ -0.37
CLDND1-214ENST00000507411 CEP350Q5VT06 3117 aa12.71□□□□□ -0.37
CLDND1-214ENST00000507411 FNBP4Q8N3X1 1017 aaPredicted RBP12.71□□□□□ -0.37
CLDND1-214ENST00000507411 ZNF784Q8NCA9 323 aaPredicted RBP12.71□□□□□ -0.37
CLDND1-214ENST00000507411 ZNF644Q9H582 1327 aaPredicted RBP12.7□□□□□ -0.38
CLDND1-214ENST00000507411 UNC13BO14795 1591 aa12.7□□□□□ -0.38
CLDND1-214ENST00000507411 CHD2O14647 1828 aaKnown RBP12.7□□□□□ -0.38
CLDND1-214ENST00000507411 R3HDM1Q15032 1099 aaKnown RBP12.7□□□□□ -0.38
CLDND1-214ENST00000507411 EFCAB6Q5THR3 1501 aa12.7□□□□□ -0.38
CLDND1-214ENST00000507411 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
CLDND1-214ENST00000507411 ATF5Q9Y2D1 282 aaPredicted RBP12.69□□□□□ -0.38
CLDND1-214ENST00000507411 BAG6P46379 1132 aa12.68□□□□□ -0.38
CLDND1-214ENST00000507411 CEP152O94986 1710 aa12.67□□□□□ -0.38
CLDND1-214ENST00000507411 PTCH1Q13635 1447 aa12.66□□□□□ -0.38
CLDND1-214ENST00000507411 GJD4Q96KN9 370 aaPredicted RBP12.66□□□□□ -0.38
CLDND1-214ENST00000507411 CCDC141Q6ZP82 1450 aa12.65□□□□□ -0.38
CLDND1-214ENST00000507411 CASKIN1Q8WXD9 1431 aa12.64□□□□□ -0.39
CLDND1-214ENST00000507411 DDX17Q92841 729 aaKnown RBP12.64□□□□□ -0.39
CLDND1-214ENST00000507411 SPHKAPQ2M3C7 1700 aa12.63□□□□□ -0.39
CLDND1-214ENST00000507411 BRWD3Q6RI45 1802 aa12.62□□□□□ -0.39
CLDND1-214ENST00000507411 DCCP43146 1447 aa12.62□□□□□ -0.39
CLDND1-214ENST00000507411 EEA1Q15075 1411 aa12.62□□□□□ -0.39
CLDND1-214ENST00000507411 PPP1R15AO75807 674 aaPredicted RBP12.61□□□□□ -0.39
CLDND1-214ENST00000507411 PPP1R1BQ9UD71 204 aaPredicted RBP12.61□□□□□ -0.39
CLDND1-214ENST00000507411 ARHGAP31Q2M1Z3 1444 aa12.61□□□□□ -0.39
CLDND1-214ENST00000507411 MST1RQ04912 1400 aa12.6□□□□□ -0.39
CLDND1-214ENST00000507411 PLEKHG1Q9ULL1 1385 aa12.59□□□□□ -0.39
CLDND1-214ENST00000507411 UBTFP17480 764 aaKnown RBP12.59□□□□□ -0.39
CLDND1-214ENST00000507411 IDI1Q13907 227 aa12.59□□□□□ -0.39
CLDND1-214ENST00000507411 EN1Q05925 392 aaPredicted RBP12.58□□□□□ -0.4
CLDND1-214ENST00000507411 ZBTB12Q9Y330 459 aaPredicted RBP12.58□□□□□ -0.4
CLDND1-214ENST00000507411 TBX22Q9Y458 520 aa12.58□□□□□ -0.4
CLDND1-214ENST00000507411 EIF2AK4Q9P2K8 1649 aaKnown RBP12.58□□□□□ -0.4
CLDND1-214ENST00000507411 RALGAPBQ86X10 1494 aa12.58□□□□□ -0.4
CLDND1-214ENST00000507411 NINLQ9Y2I6 1382 aa12.57□□□□□ -0.4
CLDND1-214ENST00000507411 RSPH4AQ5TD94 716 aa12.57□□□□□ -0.4
CLDND1-214ENST00000507411 SEPT12Q8IYM1 358 aa12.57□□□□□ -0.4
CLDND1-214ENST00000507411 ADGRB3O60242 1522 aa12.57□□□□□ -0.4
CLDND1-214ENST00000507411 GLI3P10071 1580 aa12.56□□□□□ -0.4
CLDND1-214ENST00000507411 TSPY4P0CV99 314 aa12.55□□□□□ -0.4
CLDND1-214ENST00000507411 TSPY10P0CW01 314 aa12.55□□□□□ -0.4
CLDND1-214ENST00000507411 KRT27Q7Z3Y8 459 aa12.55□□□□□ -0.4
CLDND1-214ENST00000507411 RBM42Q9BTD8 480 aaKnown RBP12.55□□□□□ -0.4
CLDND1-214ENST00000507411 CAMTA1Q9Y6Y1 1673 aa12.54□□□□□ -0.4
CLDND1-214ENST00000507411 FYCO1Q9BQS8 1478 aa12.54□□□□□ -0.4
CLDND1-214ENST00000507411 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.54□□□□□ -0.4
CLDND1-214ENST00000507411 HDGFP51858 240 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms