RNA–Protein interactions for RNA: ENST00000506275.1

ITGA1-204, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 7,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-204ENST00000506275 CENPJQ9HC77 1338 aaPredicted RBP3.12□□□□□ -1.91
ITGA1-204ENST00000506275 TRMT1LQ7Z2T5 733 aaKnown RBP3.12□□□□□ -1.91
ITGA1-204ENST00000506275 FAM177A1Q8N128 213 aaPredicted RBP3.12□□□□□ -1.91
ITGA1-204ENST00000506275 KTN1Q86UP2 1357 aaKnown RBP3.12□□□□□ -1.91
ITGA1-204ENST00000506275 CPLX1O14810 134 aa3.12□□□□□ -1.91
ITGA1-204ENST00000506275 PLCD3Q8N3E9 789 aa3.12□□□□□ -1.91
ITGA1-204ENST00000506275 PANK3Q9H999 370 aa3.12□□□□□ -1.91
ITGA1-204ENST00000506275 HTATSF1O43719 755 aaKnown RBP3.12□□□□□ -1.91
ITGA1-204ENST00000506275 RRP12Q5JTH9 1297 aaKnown RBP3.12□□□□□ -1.91
ITGA1-204ENST00000506275 PDILTQ8N807 584 aa3.12□□□□□ -1.91
ITGA1-204ENST00000506275 L3MBTL2Q969R5 705 aa3.12□□□□□ -1.91
ITGA1-204ENST00000506275 NUP155O75694 1391 aa3.12□□□□□ -1.91
ITGA1-204ENST00000506275 WASHC2CQ9Y4E1 1318 aa3.12□□□□□ -1.91
ITGA1-204ENST00000506275 HMMRO75330 724 aa3.12□□□□□ -1.91
ITGA1-204ENST00000506275 ECM2O94769 699 aaPredicted RBP3.12□□□□□ -1.91
ITGA1-204ENST00000506275 CT47A1Q5JQC4 288 aaPredicted RBP3.12□□□□□ -1.91
ITGA1-204ENST00000506275 PAXIP1Q6ZW49 1069 aaPredicted RBP3.12□□□□□ -1.91
ITGA1-204ENST00000506275 CCNB3Q8WWL7 1395 aa3.12□□□□□ -1.91
ITGA1-204ENST00000506275 FKBP5Q13451 457 aaPredicted RBP3.12□□□□□ -1.91
ITGA1-204ENST00000506275 CCDC43Q96MW1 224 aaKnown RBP3.12□□□□□ -1.91
ITGA1-204ENST00000506275 MPHOSPH9Q99550 1183 aa3.12□□□□□ -1.91
ITGA1-204ENST00000506275 SPINK5Q9NQ38 1064 aaPredicted RBP3.12□□□□□ -1.91
ITGA1-204ENST00000506275 DIAPH3Q9NSV4 1193 aa3.12□□□□□ -1.91
ITGA1-204ENST00000506275 HDGFP51858 240 aaKnown RBP3.11□□□□□ -1.91
ITGA1-204ENST00000506275 RBM10P98175 930 aaKnown RBP3.11□□□□□ -1.91
ITGA1-204ENST00000506275 C1orf141Q5JVX7 400 aa3.11□□□□□ -1.91
ITGA1-204ENST00000506275 MEX3CQ5U5Q3 659 aaKnown RBP3.11□□□□□ -1.91
ITGA1-204ENST00000506275 CCDC34Q96HJ3 373 aa3.11□□□□□ -1.91
ITGA1-204ENST00000506275 ERCC6Q03468 1493 aa3.11□□□□□ -1.91
ITGA1-204ENST00000506275 RSF1Q96T23 1441 aaPredicted RBP3.11□□□□□ -1.91
ITGA1-204ENST00000506275 CCDC85AQ96PX6 553 aaPredicted RBP3.11□□□□□ -1.91
ITGA1-204ENST00000506275 MYO9BQ13459 2157 aa3.11□□□□□ -1.91
ITGA1-204ENST00000506275 MYCNP04198 464 aaPredicted RBP3.11□□□□□ -1.91
ITGA1-204ENST00000506275 WASHC4Q2M389 1173 aa3.11□□□□□ -1.91
ITGA1-204ENST00000506275 ODF2Q5BJF6 829 aa3.11□□□□□ -1.91
ITGA1-204ENST00000506275 SPC24Q8NBT2 197 aa3.11□□□□□ -1.91
ITGA1-204ENST00000506275 TTC16Q8NEE8 873 aa3.11□□□□□ -1.91
ITGA1-204ENST00000506275 PMFBP1Q8TBY8 1022 aa3.11□□□□□ -1.91
ITGA1-204ENST00000506275 C1orf115Q9H7X2 142 aa3.11□□□□□ -1.91
ITGA1-204ENST00000506275 STRN4Q9NRL3 753 aa3.11□□□□□ -1.91
ITGA1-204ENST00000506275 WWC3Q9ULE0 1092 aa3.11□□□□□ -1.91
ITGA1-204ENST00000506275 MAP4K4O95819 1239 aaPredicted RBP3.11□□□□□ -1.91
ITGA1-204ENST00000506275 PDE4AP27815 886 aa3.11□□□□□ -1.91
ITGA1-204ENST00000506275 SYNE3Q6ZMZ3 975 aa3.11□□□□□ -1.91
ITGA1-204ENST00000506275 IFT57Q9NWB7 429 aa3.11□□□□□ -1.91
ITGA1-204ENST00000506275 DCAF1Q9Y4B6 1507 aa3.11□□□□□ -1.91
ITGA1-204ENST00000506275 PSME1Q06323 249 aa3.11□□□□□ -1.91
ITGA1-204ENST00000506275 TMEM132AQ24JP5 1023 aa3.11□□□□□ -1.91
ITGA1-204ENST00000506275 ZHX3Q9H4I2 956 aa3.11□□□□□ -1.91
ITGA1-204ENST00000506275 PANK1Q8TE04 598 aa3.1□□□□□ -1.91
ITGA1-204ENST00000506275 KANK1Q14678 1352 aa3.1□□□□□ -1.91
ITGA1-204ENST00000506275 OFD1O75665 1012 aa3.1□□□□□ -1.91
ITGA1-204ENST00000506275 TRIM29Q14134 588 aa3.1□□□□□ -1.91
ITGA1-204ENST00000506275 TTC5Q8N0Z6 440 aa3.1□□□□□ -1.91
ITGA1-204ENST00000506275 EID1Q9Y6B2 187 aa3.1□□□□□ -1.91
ITGA1-204ENST00000506275 NUTM2BA6NNL0 878 aaPredicted RBP3.1□□□□□ -1.91
ITGA1-204ENST00000506275 NUTM2EB1AL46 878 aaPredicted RBP3.1□□□□□ -1.91
ITGA1-204ENST00000506275 IPO7O95373 1038 aaKnown RBP3.1□□□□□ -1.91
ITGA1-204ENST00000506275 IFIT2P09913 472 aaKnown RBP3.1□□□□□ -1.91
ITGA1-204ENST00000506275 STK3Q13188 491 aa3.1□□□□□ -1.91
ITGA1-204ENST00000506275 NUTM2AQ8IVF1 878 aaPredicted RBP3.1□□□□□ -1.91
ITGA1-204ENST00000506275 PDE4DIPQ5VU43 2346 aa3.1□□□□□ -1.91
ITGA1-204ENST00000506275 TERF2IPQ9NYB0 399 aa3.1□□□□□ -1.91
ITGA1-204ENST00000506275 R3HCC1Q9Y3T6 440 aaKnown RBP3.1□□□□□ -1.91
ITGA1-204ENST00000506275 TRDNQ13061 729 aa3.1□□□□□ -1.91
ITGA1-204ENST00000506275 TMEM132EQ6IEE7 984 aa3.1□□□□□ -1.91
ITGA1-204ENST00000506275 SIL1Q9H173 461 aa3.1□□□□□ -1.91
ITGA1-204ENST00000506275 ANKRD62A6NC57 917 aa3.1□□□□□ -1.91
ITGA1-204ENST00000506275 TPM1P09493 284 aa3.1□□□□□ -1.91
ITGA1-204ENST00000506275 NEFHP12036 1026 aa3.1□□□□□ -1.91
ITGA1-204ENST00000506275 RIPK4P57078 832 aa3.1□□□□□ -1.91
ITGA1-204ENST00000506275 KRTAP17-1Q9BYP8 105 aa3.1□□□□□ -1.91
ITGA1-204ENST00000506275 CENPHQ9H3R5 247 aa3.1□□□□□ -1.91
ITGA1-204ENST00000506275 RBM25P49756 843 aaKnown RBP3.09□□□□□ -1.91
ITGA1-204ENST00000506275 NEXNQ0ZGT2 675 aa3.09□□□□□ -1.91
ITGA1-204ENST00000506275 CCAR1Q8IX12 1150 aaKnown RBP3.09□□□□□ -1.91
ITGA1-204ENST00000506275 SDF4Q9BRK5 362 aa3.09□□□□□ -1.91
ITGA1-204ENST00000506275 NOL10Q9BSC4 688 aaKnown RBP3.09□□□□□ -1.91
ITGA1-204ENST00000506275 EPS15P42566 896 aa3.09□□□□□ -1.91
ITGA1-204ENST00000506275 GSE1Q14687 1217 aa3.09□□□□□ -1.91
ITGA1-204ENST00000506275 HSP90AB2PQ58FF8 381 aa3.09□□□□□ -1.91
ITGA1-204ENST00000506275 RIC3Q7Z5B4 369 aa3.09□□□□□ -1.91
ITGA1-204ENST00000506275 RBM33Q96EV2 1170 aaKnown RBP3.09□□□□□ -1.91
ITGA1-204ENST00000506275 MAP7D2Q96T17 732 aa3.09□□□□□ -1.91
ITGA1-204ENST00000506275 GGNBP2Q9H3C7 697 aa3.09□□□□□ -1.91
ITGA1-204ENST00000506275 DNAJC5BQ9UF47 199 aa3.09□□□□□ -1.91
ITGA1-204ENST00000506275 PHF14O94880 888 aa3.09□□□□□ -1.91
ITGA1-204ENST00000506275 LMOD3Q0VAK6 560 aa3.09□□□□□ -1.91
ITGA1-204ENST00000506275 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.09□□□□□ -1.91
ITGA1-204ENST00000506275 DDX54Q8TDD1 881 aaKnown RBP3.09□□□□□ -1.91
ITGA1-204ENST00000506275 NLRP2Q9NX02 1062 aa3.09□□□□□ -1.91
ITGA1-204ENST00000506275 DNAJC2Q99543 621 aaKnown RBP3.09□□□□□ -1.91
ITGA1-204ENST00000506275 PPFIA3O75145 1194 aa3.09□□□□□ -1.92
ITGA1-204ENST00000506275 PPM1FP49593 454 aaPredicted RBP3.09□□□□□ -1.92
ITGA1-204ENST00000506275 XPCQ01831 940 aaPredicted RBP3.09□□□□□ -1.92
ITGA1-204ENST00000506275 CPLX2Q6PUV4 134 aaKnown RBP3.09□□□□□ -1.92
ITGA1-204ENST00000506275 IL27Q8NEV9 243 aa3.09□□□□□ -1.92
ITGA1-204ENST00000506275 COG3Q96JB2 828 aa3.09□□□□□ -1.92
ITGA1-204ENST00000506275 PSMD1Q99460 953 aa3.09□□□□□ -1.92
ITGA1-204ENST00000506275 CNTRLQ7Z7A1 2325 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms