RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.69□□□□□ -1.02
SCLT1-207ENST00000506233 TESPA1A2RU30 521 aaPredicted RBP8.69□□□□□ -1.02
SCLT1-207ENST00000506233 ZFP91Q96JP5 570 aaPredicted RBP8.69□□□□□ -1.02
SCLT1-207ENST00000506233 DUOX2Q9NRD8 1548 aa8.68□□□□□ -1.02
SCLT1-207ENST00000506233 CCDC82Q8N4S0 544 aa8.68□□□□□ -1.02
SCLT1-207ENST00000506233 RRP7BPQ9NSQ0 103 aa8.68□□□□□ -1.02
SCLT1-207ENST00000506233 STK24Q9Y6E0 443 aa8.68□□□□□ -1.02
SCLT1-207ENST00000506233 ASXL2Q76L83 1435 aa8.68□□□□□ -1.02
SCLT1-207ENST00000506233 ARHGAP5Q13017 1502 aa8.68□□□□□ -1.02
SCLT1-207ENST00000506233 KCNH8Q96L42 1107 aa8.68□□□□□ -1.02
SCLT1-207ENST00000506233 LMTK2Q8IWU2 1503 aa8.68□□□□□ -1.02
SCLT1-207ENST00000506233 DIP2CQ9Y2E4 1556 aa8.68□□□□□ -1.02
SCLT1-207ENST00000506233 MPHOSPH9Q99550 1183 aa8.67□□□□□ -1.02
SCLT1-207ENST00000506233 ZNF692Q9BU19 519 aaPredicted RBP8.67□□□□□ -1.02
SCLT1-207ENST00000506233 PTPRTO14522 1441 aa8.67□□□□□ -1.02
SCLT1-207ENST00000506233 ANKRD50Q9ULJ7 1429 aa8.67□□□□□ -1.02
SCLT1-207ENST00000506233 ATP7AQ04656 1500 aa8.67□□□□□ -1.02
SCLT1-207ENST00000506233 MYO5BQ9ULV0 1848 aa8.67□□□□□ -1.02
SCLT1-207ENST00000506233 TRPM2O94759 1503 aa8.67□□□□□ -1.02
SCLT1-207ENST00000506233 KDM4CQ9H3R0 1056 aa8.67□□□□□ -1.02
SCLT1-207ENST00000506233 PPLO60437 1756 aa8.67□□□□□ -1.02
SCLT1-207ENST00000506233 HECW2Q9P2P5 1572 aa8.66□□□□□ -1.02
SCLT1-207ENST00000506233 A2MP01023 1474 aa8.66□□□□□ -1.02
SCLT1-207ENST00000506233 SYNMO15061 1565 aa8.66□□□□□ -1.02
SCLT1-207ENST00000506233 UGGT1Q9NYU2 1555 aa8.66□□□□□ -1.02
SCLT1-207ENST00000506233 ERBINQ96RT1 1412 aa8.66□□□□□ -1.02
SCLT1-207ENST00000506233 CHIC2Q9UKJ5 165 aa8.66□□□□□ -1.02
SCLT1-207ENST00000506233 NRXN1Q9ULB1 1477 aa8.65□□□□□ -1.02
SCLT1-207ENST00000506233 RTEL1-TNFRSF6BF6WH68 1400 aa8.65□□□□□ -1.02
SCLT1-207ENST00000506233 NUBP1P53384 320 aa8.65□□□□□ -1.02
SCLT1-207ENST00000506233 MYO3AQ8NEV4 1616 aa8.65□□□□□ -1.03
SCLT1-207ENST00000506233 EFCAB6Q5THR3 1501 aa8.64□□□□□ -1.03
SCLT1-207ENST00000506233 KIAA1210Q9ULL0 1709 aa8.64□□□□□ -1.03
SCLT1-207ENST00000506233 DIEXFQ68CQ4 756 aaKnown RBP8.64□□□□□ -1.03
SCLT1-207ENST00000506233 HNRNPMP52272 730 aaKnown RBP eCLIP8.64□□□□□ -1.03
SCLT1-207ENST00000506233 KCTD17Q8N5Z5 321 aa8.64□□□□□ -1.03
SCLT1-207ENST00000506233 ZMYM4Q5VZL5 1548 aa8.63□□□□□ -1.03
SCLT1-207ENST00000506233 WDR70Q9NW82 654 aa8.63□□□□□ -1.03
SCLT1-207ENST00000506233 RALGAPBQ86X10 1494 aa8.63□□□□□ -1.03
SCLT1-207ENST00000506233 CAMSAP1Q5T5Y3 1602 aa8.63□□□□□ -1.03
SCLT1-207ENST00000506233 SSUH2Q9Y2M2 353 aa8.62□□□□□ -1.03
SCLT1-207ENST00000506233 KIF15Q9NS87 1388 aa8.62□□□□□ -1.03
SCLT1-207ENST00000506233 ATP1B4Q9UN42 357 aaPredicted RBP8.62□□□□□ -1.03
SCLT1-207ENST00000506233 WASHC2AQ641Q2 1341 aa8.62□□□□□ -1.03
SCLT1-207ENST00000506233 DHX29Q7Z478 1369 aaKnown RBP8.62□□□□□ -1.03
SCLT1-207ENST00000506233 VGFO15240 615 aaPredicted RBP8.61□□□□□ -1.03
SCLT1-207ENST00000506233 RGS22Q8NE09 1264 aa8.61□□□□□ -1.03
SCLT1-207ENST00000506233 FANCAO15360 1455 aa8.61□□□□□ -1.03
SCLT1-207ENST00000506233 NEUROD1Q13562 356 aa8.61□□□□□ -1.03
SCLT1-207ENST00000506233 BARGINQ6ZT62 677 aa8.61□□□□□ -1.03
SCLT1-207ENST00000506233 OSCARQ8IYS5 282 aa8.61□□□□□ -1.03
SCLT1-207ENST00000506233 CFAP74Q9C0B2 1584 aa8.61□□□□□ -1.03
SCLT1-207ENST00000506233 CLUAP1Q96AJ1 413 aa8.6□□□□□ -1.03
SCLT1-207ENST00000506233 COL17A1Q9UMD9 1497 aaPredicted RBP8.6□□□□□ -1.03
SCLT1-207ENST00000506233 FAM117AQ9C073 453 aa8.6□□□□□ -1.03
SCLT1-207ENST00000506233 ADGRB3O60242 1522 aa8.6□□□□□ -1.03
SCLT1-207ENST00000506233 ARHGEF1Q92888 912 aaKnown RBP8.6□□□□□ -1.03
SCLT1-207ENST00000506233 REREQ9P2R6 1566 aa8.6□□□□□ -1.03
SCLT1-207ENST00000506233 POGZQ7Z3K3 1410 aa8.6□□□□□ -1.03
SCLT1-207ENST00000506233 MTMR7Q9Y216 660 aa8.59□□□□□ -1.03
SCLT1-207ENST00000506233 PRAG1Q86YV5 1406 aa8.59□□□□□ -1.03
SCLT1-207ENST00000506233 MLH3Q9UHC1 1453 aa8.59□□□□□ -1.03
SCLT1-207ENST00000506233 ABCB7O75027 752 aa8.59□□□□□ -1.03
SCLT1-207ENST00000506233 L3MBTL2Q969R5 705 aa8.59□□□□□ -1.03
SCLT1-207ENST00000506233 CFDP1Q9UEE9 299 aaPredicted RBP8.59□□□□□ -1.03
SCLT1-207ENST00000506233 ADGRB1O14514 1584 aa8.58□□□□□ -1.04
SCLT1-207ENST00000506233 GPRASP1Q5JY77 1395 aa8.58□□□□□ -1.04
SCLT1-207ENST00000506233 RAD21O60216 631 aa8.58□□□□□ -1.04
SCLT1-207ENST00000506233 FOXD4L5Q5VV16 416 aaPredicted RBP8.58□□□□□ -1.04
SCLT1-207ENST00000506233 FOXD4L4Q8WXT5 416 aaPredicted RBP8.58□□□□□ -1.04
SCLT1-207ENST00000506233 ASXL1Q8IXJ9 1541 aa8.58□□□□□ -1.04
SCLT1-207ENST00000506233 NRXN3Q9Y4C0 1643 aa8.57□□□□□ -1.04
SCLT1-207ENST00000506233 ONECUT3O60422 494 aaPredicted RBP8.57□□□□□ -1.04
SCLT1-207ENST00000506233 PREX1Q8TCU6 1659 aa8.56□□□□□ -1.04
SCLT1-207ENST00000506233 ANKRD30AQ9BXX3 1397 aa8.56□□□□□ -1.04
SCLT1-207ENST00000506233 ABCC3O15438 1527 aa8.56□□□□□ -1.04
SCLT1-207ENST00000506233 TMEM131LA2VDJ0 1609 aa8.56□□□□□ -1.04
SCLT1-207ENST00000506233 GSE1Q14687 1217 aa8.56□□□□□ -1.04
SCLT1-207ENST00000506233 HIRIP3Q9BW71 556 aaPredicted RBP8.56□□□□□ -1.04
SCLT1-207ENST00000506233 PLEKHG3A1L390 1219 aa8.55□□□□□ -1.04
SCLT1-207ENST00000506233 ZBTB47Q9UFB7 747 aaPredicted RBP8.55□□□□□ -1.04
SCLT1-207ENST00000506233 RBM26Q5T8P6 1007 aaKnown RBP8.55□□□□□ -1.04
SCLT1-207ENST00000506233 ARHGEF28Q8N1W1 1705 aaKnown RBP8.54□□□□□ -1.04
SCLT1-207ENST00000506233 DCAF8Q5TAQ9 597 aa8.54□□□□□ -1.04
SCLT1-207ENST00000506233 ADGRL1O94910 1474 aa8.54□□□□□ -1.04
SCLT1-207ENST00000506233 NEXMIFQ5QGS0 1516 aa8.54□□□□□ -1.04
SCLT1-207ENST00000506233 KIF1BO60333 1816 aa8.54□□□□□ -1.04
SCLT1-207ENST00000506233 PLEKHD1A6NEE1 506 aa8.54□□□□□ -1.04
SCLT1-207ENST00000506233 CCDC184Q52MB2 194 aa8.53□□□□□ -1.04
SCLT1-207ENST00000506233 AK7Q96M32 723 aa8.52□□□□□ -1.04
SCLT1-207ENST00000506233 PDE4DQ08499 809 aa8.52□□□□□ -1.05
SCLT1-207ENST00000506233 E2F4Q16254 413 aa8.52□□□□□ -1.05
SCLT1-207ENST00000506233 AFAP1Q8N556 730 aa8.52□□□□□ -1.05
SCLT1-207ENST00000506233 AEBP1Q8IUX7 1158 aa8.52□□□□□ -1.05
SCLT1-207ENST00000506233 TSPOAP1O95153 1857 aa8.51□□□□□ -1.05
SCLT1-207ENST00000506233 PPP1R37O75864 691 aa8.51□□□□□ -1.05
SCLT1-207ENST00000506233 YEATS2Q9ULM3 1422 aa8.51□□□□□ -1.05
SCLT1-207ENST00000506233 NEO1Q92859 1461 aa8.51□□□□□ -1.05
SCLT1-207ENST00000506233 TRIM66O15016 1216 aa8.51□□□□□ -1.05
SCLT1-207ENST00000506233 NOS1P29475 1434 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms