RNA–Protein interactions for RNA: ENST00000502664.5

GYPB-202, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-202ENST00000502664 CDC42BPAQ5VT25 1732 aa8.5□□□□□ -1.05
GYPB-202ENST00000502664 PLCD3Q8N3E9 789 aa8.5□□□□□ -1.05
GYPB-202ENST00000502664 ZNF777Q9ULD5 760 aaPredicted RBP8.5□□□□□ -1.05
GYPB-202ENST00000502664 SYCP2Q9BX26 1530 aa8.49□□□□□ -1.05
GYPB-202ENST00000502664 NEURL4Q96JN8 1562 aa8.49□□□□□ -1.05
GYPB-202ENST00000502664 UBTFP17480 764 aaKnown RBP8.49□□□□□ -1.05
GYPB-202ENST00000502664 GGT6Q6P531 493 aa8.49□□□□□ -1.05
GYPB-202ENST00000502664 MARVELD3Q96A59 401 aa8.49□□□□□ -1.05
GYPB-202ENST00000502664 PLXNC1O60486 1568 aa8.48□□□□□ -1.05
GYPB-202ENST00000502664 DNMT1P26358 1616 aaKnown RBP8.48□□□□□ -1.05
GYPB-202ENST00000502664 SNPHO15079 494 aa8.48□□□□□ -1.05
GYPB-202ENST00000502664 OCEL1Q9H607 264 aa8.48□□□□□ -1.05
GYPB-202ENST00000502664 FBXO31Q5XUX0 539 aaPredicted RBP8.47□□□□□ -1.05
GYPB-202ENST00000502664 RGS17Q9UGC6 210 aaPredicted RBP8.47□□□□□ -1.05
GYPB-202ENST00000502664 SPAG9O60271 1321 aaKnown RBP8.47□□□□□ -1.05
GYPB-202ENST00000502664 A2MP01023 1474 aa8.46□□□□□ -1.05
GYPB-202ENST00000502664 SHANK2Q9UPX8 1470 aa8.46□□□□□ -1.05
GYPB-202ENST00000502664 ATP7AQ04656 1500 aa8.46□□□□□ -1.05
GYPB-202ENST00000502664 TOM1O60784 492 aa8.46□□□□□ -1.06
GYPB-202ENST00000502664 A2ML1A8K2U0 1454 aa8.45□□□□□ -1.06
GYPB-202ENST00000502664 GPATCH8Q9UKJ3 1502 aaKnown RBP8.45□□□□□ -1.06
GYPB-202ENST00000502664 VWDEQ8N2E2 1590 aa8.45□□□□□ -1.06
GYPB-202ENST00000502664 INO80Q9ULG1 1556 aaPredicted RBP8.45□□□□□ -1.06
GYPB-202ENST00000502664 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.45□□□□□ -1.06
GYPB-202ENST00000502664 FAM212AQ96EL1 285 aa8.44□□□□□ -1.06
GYPB-202ENST00000502664 ZBTB47Q9UFB7 747 aaPredicted RBP8.44□□□□□ -1.06
GYPB-202ENST00000502664 ZNF644Q9H582 1327 aaPredicted RBP8.44□□□□□ -1.06
GYPB-202ENST00000502664 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.44□□□□□ -1.06
GYPB-202ENST00000502664 CPS1P31327 1500 aa8.44□□□□□ -1.06
GYPB-202ENST00000502664 POLR1AO95602 1720 aaPredicted RBP8.43□□□□□ -1.06
GYPB-202ENST00000502664 STRCP1A6NGW2 1772 aa8.43□□□□□ -1.06
GYPB-202ENST00000502664 CASKIN1Q8WXD9 1431 aa8.43□□□□□ -1.06
GYPB-202ENST00000502664 CCDC18Q5T9S5 1454 aa8.41□□□□□ -1.06
GYPB-202ENST00000502664 TNRQ92752 1358 aa8.41□□□□□ -1.06
GYPB-202ENST00000502664 KIAA1107Q9UPP5 1409 aa8.4□□□□□ -1.06
GYPB-202ENST00000502664 LRRC7Q96NW7 1537 aa8.39□□□□□ -1.07
GYPB-202ENST00000502664 NPHP4O75161 1426 aaPredicted RBP8.39□□□□□ -1.07
GYPB-202ENST00000502664 POTEAQ6S8J7 498 aa8.39□□□□□ -1.07
GYPB-202ENST00000502664 ANKLE2Q86XL3 938 aa8.39□□□□□ -1.07
GYPB-202ENST00000502664 CFDP1Q9UEE9 299 aaPredicted RBP8.39□□□□□ -1.07
GYPB-202ENST00000502664 MBD5Q9P267 1494 aa8.38□□□□□ -1.07
GYPB-202ENST00000502664 ADGBQ8N7X0 1667 aa8.38□□□□□ -1.07
GYPB-202ENST00000502664 POTEB3A0JP26 581 aa8.38□□□□□ -1.07
GYPB-202ENST00000502664 KIF3BO15066 747 aa8.38□□□□□ -1.07
GYPB-202ENST00000502664 EMP3P54852 163 aa8.38□□□□□ -1.07
GYPB-202ENST00000502664 POTEBQ6S5H4 581 aa8.38□□□□□ -1.07
GYPB-202ENST00000502664 KRTAP3-3Q9BYR6 98 aa8.38□□□□□ -1.07
GYPB-202ENST00000502664 KRTAP3-2Q9BYR7 98 aa8.38□□□□□ -1.07
GYPB-202ENST00000502664 MED14O60244 1454 aa8.38□□□□□ -1.07
GYPB-202ENST00000502664 PZPP20742 1482 aa8.38□□□□□ -1.07
GYPB-202ENST00000502664 UGGT1Q9NYU2 1555 aa8.37□□□□□ -1.07
GYPB-202ENST00000502664 IQGAP1P46940 1657 aa8.37□□□□□ -1.07
GYPB-202ENST00000502664 DHX29Q7Z478 1369 aaKnown RBP8.36□□□□□ -1.07
GYPB-202ENST00000502664 CCNB3Q8WWL7 1395 aa8.36□□□□□ -1.07
GYPB-202ENST00000502664 PYGBP11216 843 aa8.36□□□□□ -1.07
GYPB-202ENST00000502664 PDCD7Q8N8D1 485 aaKnown RBP8.36□□□□□ -1.07
GYPB-202ENST00000502664 PCDHB8Q9UN66 801 aa8.36□□□□□ -1.07
GYPB-202ENST00000502664 FYCO1Q9BQS8 1478 aa8.36□□□□□ -1.07
GYPB-202ENST00000502664 MIA2Q96PC5 1412 aa8.36□□□□□ -1.07
GYPB-202ENST00000502664 DEPDC5O75140 1603 aa8.36□□□□□ -1.07
GYPB-202ENST00000502664 KDM5DQ9BY66 1539 aa8.35□□□□□ -1.07
GYPB-202ENST00000502664 PLEKHH2Q8IVE3 1493 aa8.35□□□□□ -1.07
GYPB-202ENST00000502664 THEMISQ8N1K5 641 aaPredicted RBP8.35□□□□□ -1.07
GYPB-202ENST00000502664 HS3ST6Q96QI5 342 aa8.35□□□□□ -1.07
GYPB-202ENST00000502664 RNF17Q9BXT8 1623 aaKnown RBP8.35□□□□□ -1.07
GYPB-202ENST00000502664 TIAM1Q13009 1591 aa8.35□□□□□ -1.07
GYPB-202ENST00000502664 SETD1AO15047 1707 aaKnown RBP8.34□□□□□ -1.07
GYPB-202ENST00000502664 WASHC2CQ9Y4E1 1318 aa8.34□□□□□ -1.07
GYPB-202ENST00000502664 ZC3H13Q5T200 1668 aaKnown RBP8.34□□□□□ -1.07
GYPB-202ENST00000502664 XIRP1Q702N8 1843 aaKnown RBP8.34□□□□□ -1.07
GYPB-202ENST00000502664 FAM135AQ9P2D6 1515 aa8.34□□□□□ -1.08
GYPB-202ENST00000502664 RTEL1-TNFRSF6BF6WH68 1400 aa8.33□□□□□ -1.08
GYPB-202ENST00000502664 DCAF8Q5TAQ9 597 aa8.33□□□□□ -1.08
GYPB-202ENST00000502664 NLRP1Q9C000 1473 aa8.32□□□□□ -1.08
GYPB-202ENST00000502664 SYNMO15061 1565 aa8.32□□□□□ -1.08
GYPB-202ENST00000502664 FAM205CA6NFA0 338 aa8.32□□□□□ -1.08
GYPB-202ENST00000502664 LTKP29376 864 aa8.32□□□□□ -1.08
GYPB-202ENST00000502664 C3orf67Q6ZVT6 689 aa8.32□□□□□ -1.08
GYPB-202ENST00000502664 RBM33Q96EV2 1170 aaKnown RBP8.32□□□□□ -1.08
GYPB-202ENST00000502664 MTUS2Q5JR59 1369 aa8.31□□□□□ -1.08
GYPB-202ENST00000502664 NCOA2Q15596 1464 aa8.31□□□□□ -1.08
GYPB-202ENST00000502664 L3MBTL3Q96JM7 780 aaPredicted RBP8.3□□□□□ -1.08
GYPB-202ENST00000502664 UBR1Q8IWV7 1749 aa8.29□□□□□ -1.08
GYPB-202ENST00000502664 ERVK-7P63135 1459 aa8.29□□□□□ -1.08
GYPB-202ENST00000502664 ABCC3O15438 1527 aa8.29□□□□□ -1.08
GYPB-202ENST00000502664 CAMSAP2Q08AD1 1489 aa8.28□□□□□ -1.08
GYPB-202ENST00000502664 CCDC141Q6ZP82 1450 aa8.28□□□□□ -1.08
GYPB-202ENST00000502664 SCAF11Q99590 1463 aaKnown RBP8.28□□□□□ -1.08
GYPB-202ENST00000502664 MROH1Q8NDA8 1641 aa8.28□□□□□ -1.08
GYPB-202ENST00000502664 FAM135BQ49AJ0 1406 aa8.28□□□□□ -1.08
GYPB-202ENST00000502664 ROBO1Q9Y6N7 1651 aa8.27□□□□□ -1.08
GYPB-202ENST00000502664 TXNDC2Q86VQ3 553 aa8.27□□□□□ -1.09
GYPB-202ENST00000502664 ARHGAP23Q9P227 1491 aa8.26□□□□□ -1.09
GYPB-202ENST00000502664 CEP152O94986 1710 aa8.26□□□□□ -1.09
GYPB-202ENST00000502664 TMEM94Q12767 1356 aa8.26□□□□□ -1.09
GYPB-202ENST00000502664 MAP3K1Q13233 1512 aa8.26□□□□□ -1.09
GYPB-202ENST00000502664 EHBP1L1Q8N3D4 1523 aa8.26□□□□□ -1.09
GYPB-202ENST00000502664 CFAP65Q6ZU64 1925 aaKnown RBP8.26□□□□□ -1.09
GYPB-202ENST00000502664 CEP162Q5TB80 1403 aa8.26□□□□□ -1.09
GYPB-202ENST00000502664 SLIT1O75093 1534 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms