RNA–Protein interactions for RNA: ENST00000497809.1

NEB-216, Transcript of nebulin, humanhuman

TSL 2

Gene NEB, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-216ENST00000497809 TPD52L2O43399 206 aaKnown RBP10.13□□□□□ -0.79
NEB-216ENST00000497809 PAK3O75914 559 aaPredicted RBP10.13□□□□□ -0.79
NEB-216ENST00000497809 DPH6Q7L8W6 267 aa10.12□□□□□ -0.79
NEB-216ENST00000497809 PHF8Q9UPP1 1060 aa10.12□□□□□ -0.79
NEB-216ENST00000497809 RFC5P40937 340 aa10.12□□□□□ -0.79
NEB-216ENST00000497809 PDAP1Q13442 181 aaKnown RBP10.12□□□□□ -0.79
NEB-216ENST00000497809 BANK1Q8NDB2 785 aa10.12□□□□□ -0.79
NEB-216ENST00000497809 MYH16Q9H6N6 1097 aa10.12□□□□□ -0.79
NEB-216ENST00000497809 PDIA6Q15084 440 aa10.1□□□□□ -0.79
NEB-216ENST00000497809 HDGFL1Q5TGJ6 251 aa10.1□□□□□ -0.79
NEB-216ENST00000497809 GPATCH3Q96I76 525 aa10.1□□□□□ -0.79
NEB-216ENST00000497809 CDCA7Q9BWT1 371 aaPredicted RBP10.1□□□□□ -0.79
NEB-216ENST00000497809 TBC1D2Q9BYX2 928 aa10.1□□□□□ -0.79
NEB-216ENST00000497809 TBC1D2BQ9UPU7 963 aa10.1□□□□□ -0.79
NEB-216ENST00000497809 RBM46Q8TBY0 533 aaKnown RBP10.09□□□□□ -0.79
NEB-216ENST00000497809 SF3A1Q15459 793 aaKnown RBP10.08□□□□□ -0.8
NEB-216ENST00000497809 PRDM10Q9NQV6 1147 aa10.08□□□□□ -0.8
NEB-216ENST00000497809 GALR2O43603 387 aaPredicted RBP10.07□□□□□ -0.8
NEB-216ENST00000497809 ERCC3P19447 782 aa10.07□□□□□ -0.8
NEB-216ENST00000497809 CDCA8Q53HL2 280 aa10.07□□□□□ -0.8
NEB-216ENST00000497809 TMUB1Q9BVT8 246 aa10.07□□□□□ -0.8
NEB-216ENST00000497809 EMILIN3Q9NT22 766 aa10.07□□□□□ -0.8
NEB-216ENST00000497809 NLRP6P59044 892 aa10.06□□□□□ -0.8
NEB-216ENST00000497809 PPP1R12CQ9BZL4 782 aa10.06□□□□□ -0.8
NEB-216ENST00000497809 RECKO95980 971 aa10.06□□□□□ -0.8
NEB-216ENST00000497809 WWC1Q8IX03 1113 aa10.06□□□□□ -0.8
NEB-216ENST00000497809 EFCAB3Q8N7B9 438 aa10.06□□□□□ -0.8
NEB-216ENST00000497809 PCDHB8Q9UN66 801 aa10.06□□□□□ -0.8
NEB-216ENST00000497809 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.06□□□□□ -0.8
NEB-216ENST00000497809 PCDHB13Q9Y5F0 798 aa10.06□□□□□ -0.8
NEB-216ENST00000497809 KLHL42Q9P2K6 505 aa10.05□□□□□ -0.8
NEB-216ENST00000497809 CENPBP07199 599 aaPredicted RBP10.05□□□□□ -0.8
NEB-216ENST00000497809 HIC1Q14526 733 aa10.05□□□□□ -0.8
NEB-216ENST00000497809 GORABQ5T7V8 394 aa10.05□□□□□ -0.8
NEB-216ENST00000497809 VTI1AQ96AJ9 217 aa10.05□□□□□ -0.8
NEB-216ENST00000497809 SBNO2Q9Y2G9 1366 aa10.04□□□□□ -0.8
NEB-216ENST00000497809 ZNF326Q5BKZ1 582 aaKnown RBP10.04□□□□□ -0.8
NEB-216ENST00000497809 MYSM1Q5VVJ2 828 aa10.04□□□□□ -0.8
NEB-216ENST00000497809 BEGAINQ9BUH8 593 aa10.04□□□□□ -0.8
NEB-216ENST00000497809 TAGLNQ01995 201 aaKnown RBP10.03□□□□□ -0.8
NEB-216ENST00000497809 PALM3A6NDB9 673 aaPredicted RBP10.01□□□□□ -0.81
NEB-216ENST00000497809 GRXCR2A6NFK2 248 aa10.01□□□□□ -0.81
NEB-216ENST00000497809 LMOD1P29536 600 aaPredicted RBP10.01□□□□□ -0.81
NEB-216ENST00000497809 PHLDB3Q6NSJ2 640 aa10.01□□□□□ -0.81
NEB-216ENST00000497809 DNAJC2Q99543 621 aaKnown RBP10.01□□□□□ -0.81
NEB-216ENST00000497809 SPDYE16A6NNV3 312 aaPredicted RBP10.01□□□□□ -0.81
NEB-216ENST00000497809 MAP4K4O95819 1239 aaPredicted RBP10.01□□□□□ -0.81
NEB-216ENST00000497809 VAMP1P23763 118 aa10.01□□□□□ -0.81
NEB-216ENST00000497809 SSTR3P32745 418 aaPredicted RBP10.01□□□□□ -0.81
NEB-216ENST00000497809 PSEN1P49768 467 aa10.01□□□□□ -0.81
NEB-216ENST00000497809 HSP90AB4PQ58FF6 505 aa10.01□□□□□ -0.81
NEB-216ENST00000497809 NPAS4Q8IUM7 802 aa10.01□□□□□ -0.81
NEB-216ENST00000497809 ATG7O95352 703 aa10□□□□□ -0.81
NEB-216ENST00000497809 C7P10643 843 aa10□□□□□ -0.81
NEB-216ENST00000497809 ANAPC15P60006 121 aa10□□□□□ -0.81
NEB-216ENST00000497809 MAFGO15525 162 aa9.99□□□□□ -0.81
NEB-216ENST00000497809 PEX14O75381 377 aa9.99□□□□□ -0.81
NEB-216ENST00000497809 LARGE2Q8N3Y3 721 aa9.99□□□□□ -0.81
NEB-216ENST00000497809 CCER1Q8TC90 406 aaPredicted RBP9.99□□□□□ -0.81
NEB-216ENST00000497809 PHF12Q96QT6 1004 aa9.99□□□□□ -0.81
NEB-216ENST00000497809 CLK2P49760 499 aaKnown RBP9.99□□□□□ -0.81
NEB-216ENST00000497809 MDM2Q00987 491 aaPredicted RBP9.99□□□□□ -0.81
NEB-216ENST00000497809 SGSM3Q96HU1 749 aa9.99□□□□□ -0.81
NEB-216ENST00000497809 LNPKQ9C0E8 428 aa9.99□□□□□ -0.81
NEB-216ENST00000497809 FCHSD2O94868 740 aa9.98□□□□□ -0.81
NEB-216ENST00000497809 PPP1R15BQ5SWA1 713 aa9.97□□□□□ -0.81
NEB-216ENST00000497809 OTUD5Q96G74 571 aa9.97□□□□□ -0.81
NEB-216ENST00000497809 PHOX2BQ99453 314 aa9.97□□□□□ -0.81
NEB-216ENST00000497809 PLCD4Q9BRC7 762 aa9.97□□□□□ -0.81
NEB-216ENST00000497809 SETQ01105 290 aaPredicted RBP9.97□□□□□ -0.81
NEB-216ENST00000497809 FAM50AQ14320 339 aaKnown RBP9.97□□□□□ -0.81
NEB-216ENST00000497809 ANKRD33BA6NCL7 494 aa9.96□□□□□ -0.81
NEB-216ENST00000497809 PARNO95453 639 aaKnown RBP9.96□□□□□ -0.81
NEB-216ENST00000497809 TMEM259Q4ZIN3 620 aa9.96□□□□□ -0.81
NEB-216ENST00000497809 MS4A4AQ96JQ5 239 aa9.96□□□□□ -0.81
NEB-216ENST00000497809 GPCPD1Q9NPB8 672 aa9.96□□□□□ -0.81
NEB-216ENST00000497809 CLCN1P35523 988 aa9.95□□□□□ -0.82
NEB-216ENST00000497809 APBB1IPQ7Z5R6 666 aaPredicted RBP9.95□□□□□ -0.82
NEB-216ENST00000497809 UCN2Q96RP3 112 aa9.95□□□□□ -0.82
NEB-216ENST00000497809 OSBPP22059 807 aa9.95□□□□□ -0.82
NEB-216ENST00000497809 NOP9Q86U38 636 aaKnown RBP9.95□□□□□ -0.82
NEB-216ENST00000497809 ERCC5P28715 1186 aaPredicted RBP9.94□□□□□ -0.82
NEB-216ENST00000497809 MARSP56192 900 aaKnown RBP9.94□□□□□ -0.82
NEB-216ENST00000497809 SPTY2D1Q68D10 685 aaPredicted RBP9.94□□□□□ -0.82
NEB-216ENST00000497809 EVI5LQ96CN4 794 aa9.94□□□□□ -0.82
NEB-216ENST00000497809 TMA7Q9Y2S6 64 aaKnown RBP9.94□□□□□ -0.82
NEB-216ENST00000497809 EGFLAMQ63HQ2 1017 aa9.94□□□□□ -0.82
NEB-216ENST00000497809 NAP1L5Q96NT1 182 aaPredicted RBP9.94□□□□□ -0.82
NEB-216ENST00000497809 TFIP11Q9UBB9 837 aaKnown RBP9.94□□□□□ -0.82
NEB-216ENST00000497809 SOX12O15370 315 aa9.93□□□□□ -0.82
NEB-216ENST00000497809 PSME1Q06323 249 aa9.93□□□□□ -0.82
NEB-216ENST00000497809 TSNAXIP1Q2TAA8 658 aa9.93□□□□□ -0.82
NEB-216ENST00000497809 FOXD4L6Q3SYB3 417 aaPredicted RBP9.93□□□□□ -0.82
NEB-216ENST00000497809 FOXD4L3Q6VB84 417 aaPredicted RBP9.93□□□□□ -0.82
NEB-216ENST00000497809 ANO8Q9HCE9 1232 aaPredicted RBP9.93□□□□□ -0.82
NEB-216ENST00000497809 B4GALNT3Q6L9W6 998 aa9.92□□□□□ -0.82
NEB-216ENST00000497809 CABP2Q9NPB3 220 aa9.92□□□□□ -0.82
NEB-216ENST00000497809 LAS1LQ9Y4W2 734 aaKnown RBP9.92□□□□□ -0.82
NEB-216ENST00000497809 TLDC2A0PJX2 215 aa9.92□□□□□ -0.82
NEB-216ENST00000497809 SOWAHDA6NJG2 315 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms