RNA–Protein interactions for RNA: ENST00000496854.1

ITGAV-208, Transcript of integrin subunit alpha V, humanhuman

TSL 3

Gene ITGAV, Length 611 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-208ENST00000496854 KIDINS220Q9ULH0 1771 aa13.07□□□□□ -0.32
ITGAV-208ENST00000496854 CASKIN1Q8WXD9 1431 aa13.06□□□□□ -0.32
ITGAV-208ENST00000496854 FYCO1Q9BQS8 1478 aa13.05□□□□□ -0.32
ITGAV-208ENST00000496854 STRCQ7RTU9 1775 aa13.05□□□□□ -0.32
ITGAV-208ENST00000496854 EFCAB2Q5VUJ9 269 aa13.05□□□□□ -0.32
ITGAV-208ENST00000496854 SAMD9LQ8IVG5 1584 aa13.05□□□□□ -0.32
ITGAV-208ENST00000496854 TRAPPC8Q9Y2L5 1435 aa13.05□□□□□ -0.32
ITGAV-208ENST00000496854 MLH3Q9UHC1 1453 aa13.04□□□□□ -0.32
ITGAV-208ENST00000496854 CDK11AQ9UQ88 783 aaPredicted RBP13.03□□□□□ -0.32
ITGAV-208ENST00000496854 AGLP35573 1532 aa13.03□□□□□ -0.32
ITGAV-208ENST00000496854 SYCP2Q9BX26 1530 aa13.03□□□□□ -0.32
ITGAV-208ENST00000496854 MICALL2Q8IY33 904 aa13.02□□□□□ -0.33
ITGAV-208ENST00000496854 AFAP1Q8N556 730 aa13.02□□□□□ -0.33
ITGAV-208ENST00000496854 NKX1-1Q15270 411 aaPredicted RBP13.01□□□□□ -0.33
ITGAV-208ENST00000496854 INO80Q9ULG1 1556 aaPredicted RBP13□□□□□ -0.33
ITGAV-208ENST00000496854 TMEM121BQ9BXQ6 578 aaPredicted RBP13□□□□□ -0.33
ITGAV-208ENST00000496854 UHRF1BP1Q6BDS2 1440 aa12.99□□□□□ -0.33
ITGAV-208ENST00000496854 CEBPAP49715 358 aaPredicted RBP12.99□□□□□ -0.33
ITGAV-208ENST00000496854 MROH2AA6NES4 1674 aa12.99□□□□□ -0.33
ITGAV-208ENST00000496854 PLXNC1O60486 1568 aa12.98□□□□□ -0.33
ITGAV-208ENST00000496854 SUPT6HQ7KZ85 1726 aaKnown RBP12.96□□□□□ -0.33
ITGAV-208ENST00000496854 ATP7AQ04656 1500 aa12.96□□□□□ -0.33
ITGAV-208ENST00000496854 GPATCH8Q9UKJ3 1502 aaKnown RBP12.96□□□□□ -0.33
ITGAV-208ENST00000496854 TIAM1Q13009 1591 aa12.95□□□□□ -0.34
ITGAV-208ENST00000496854 PPP1R37O75864 691 aa12.95□□□□□ -0.34
ITGAV-208ENST00000496854 RYDENQ9NUL5 291 aaKnown RBP12.95□□□□□ -0.34
ITGAV-208ENST00000496854 CLTCQ00610 1675 aaKnown RBP12.94□□□□□ -0.34
ITGAV-208ENST00000496854 MYO3AQ8NEV4 1616 aa12.94□□□□□ -0.34
ITGAV-208ENST00000496854 ZNF142P52746 1687 aaPredicted RBP12.93□□□□□ -0.34
ITGAV-208ENST00000496854 MYT1LQ9UL68 1186 aa12.93□□□□□ -0.34
ITGAV-208ENST00000496854 CERKQ8TCT0 537 aa12.92□□□□□ -0.34
ITGAV-208ENST00000496854 EHBP1L1Q8N3D4 1523 aa12.91□□□□□ -0.34
ITGAV-208ENST00000496854 ADGBQ8N7X0 1667 aa12.9□□□□□ -0.34
ITGAV-208ENST00000496854 CNTLNQ9NXG0 1405 aa12.9□□□□□ -0.34
ITGAV-208ENST00000496854 SETD1BQ9UPS6 1966 aaKnown RBP12.9□□□□□ -0.34
ITGAV-208ENST00000496854 NCOA1Q15788 1441 aa12.89□□□□□ -0.35
ITGAV-208ENST00000496854 CAMSAP1Q5T5Y3 1602 aa12.89□□□□□ -0.35
ITGAV-208ENST00000496854 LTBP4Q8N2S1 1624 aa12.89□□□□□ -0.35
ITGAV-208ENST00000496854 FAM163AQ96GL9 167 aaPredicted RBP12.89□□□□□ -0.35
ITGAV-208ENST00000496854 BBXQ8WY36 941 aaPredicted RBP12.88□□□□□ -0.35
ITGAV-208ENST00000496854 A2MP01023 1474 aa12.88□□□□□ -0.35
ITGAV-208ENST00000496854 PLEKHH2Q8IVE3 1493 aa12.88□□□□□ -0.35
ITGAV-208ENST00000496854 PTPRTO14522 1441 aa12.88□□□□□ -0.35
ITGAV-208ENST00000496854 KIAA1107Q9UPP5 1409 aa12.88□□□□□ -0.35
ITGAV-208ENST00000496854 GTPBP6O43824 516 aaPredicted RBP12.87□□□□□ -0.35
ITGAV-208ENST00000496854 ZNF777Q9ULD5 760 aaPredicted RBP12.87□□□□□ -0.35
ITGAV-208ENST00000496854 NPATQ14207 1427 aa12.87□□□□□ -0.35
ITGAV-208ENST00000496854 CEP170BQ9Y4F5 1589 aaPredicted RBP12.86□□□□□ -0.35
ITGAV-208ENST00000496854 SNPHO15079 494 aa12.86□□□□□ -0.35
ITGAV-208ENST00000496854 TMEM92Q6UXU6 159 aa12.86□□□□□ -0.35
ITGAV-208ENST00000496854 MTUS2Q5JR59 1369 aa12.85□□□□□ -0.35
ITGAV-208ENST00000496854 CCNB3Q8WWL7 1395 aa12.85□□□□□ -0.35
ITGAV-208ENST00000496854 SPAG9O60271 1321 aaKnown RBP12.85□□□□□ -0.35
ITGAV-208ENST00000496854 HNRNPMP52272 730 aaKnown RBP eCLIP12.84□□□□□ -0.35
ITGAV-208ENST00000496854 MBD5Q9P267 1494 aa12.84□□□□□ -0.35
ITGAV-208ENST00000496854 PTPRKQ15262 1439 aa12.82□□□□□ -0.36
ITGAV-208ENST00000496854 CEP162Q5TB80 1403 aa12.82□□□□□ -0.36
ITGAV-208ENST00000496854 ESF1Q9H501 851 aaKnown RBP12.82□□□□□ -0.36
ITGAV-208ENST00000496854 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.82□□□□□ -0.36
ITGAV-208ENST00000496854 ZMYM3Q14202 1370 aa12.81□□□□□ -0.36
ITGAV-208ENST00000496854 SPATA31D1Q6ZQQ2 1576 aa12.81□□□□□ -0.36
ITGAV-208ENST00000496854 CAMSAP2Q08AD1 1489 aa12.81□□□□□ -0.36
ITGAV-208ENST00000496854 PLA2R1Q13018 1463 aa12.81□□□□□ -0.36
ITGAV-208ENST00000496854 IQSEC2Q5JU85 1478 aa12.81□□□□□ -0.36
ITGAV-208ENST00000496854 CFDP1Q9UEE9 299 aaPredicted RBP12.81□□□□□ -0.36
ITGAV-208ENST00000496854 TCOF1Q13428 1488 aaKnown RBP12.8□□□□□ -0.36
ITGAV-208ENST00000496854 POLR1AO95602 1720 aaPredicted RBP12.8□□□□□ -0.36
ITGAV-208ENST00000496854 ZNF644Q9H582 1327 aaPredicted RBP12.8□□□□□ -0.36
ITGAV-208ENST00000496854 DNMT1P26358 1616 aaKnown RBP12.79□□□□□ -0.36
ITGAV-208ENST00000496854 NCOA2Q15596 1464 aa12.78□□□□□ -0.36
ITGAV-208ENST00000496854 CCDC141Q6ZP82 1450 aa12.78□□□□□ -0.36
ITGAV-208ENST00000496854 KDM5DQ9BY66 1539 aa12.78□□□□□ -0.36
ITGAV-208ENST00000496854 TMC2Q8TDI7 906 aa12.78□□□□□ -0.36
ITGAV-208ENST00000496854 NEURL4Q96JN8 1562 aa12.77□□□□□ -0.36
ITGAV-208ENST00000496854 RTEL1-TNFRSF6BF6WH68 1400 aa12.77□□□□□ -0.37
ITGAV-208ENST00000496854 C2orf72A6NCS6 295 aa12.76□□□□□ -0.37
ITGAV-208ENST00000496854 FAM135AQ9P2D6 1515 aa12.76□□□□□ -0.37
ITGAV-208ENST00000496854 ARHGEF5Q12774 1597 aa12.76□□□□□ -0.37
ITGAV-208ENST00000496854 A2ML1A8K2U0 1454 aa12.75□□□□□ -0.37
ITGAV-208ENST00000496854 ST18O60284 1047 aa12.75□□□□□ -0.37
ITGAV-208ENST00000496854 GGT6Q6P531 493 aa12.75□□□□□ -0.37
ITGAV-208ENST00000496854 ZNF335Q9H4Z2 1342 aaPredicted RBP12.74□□□□□ -0.37
ITGAV-208ENST00000496854 NCKAP5LQ9HCH0 1330 aa12.74□□□□□ -0.37
ITGAV-208ENST00000496854 LCE2DQ5TA82 110 aaPredicted RBP12.74□□□□□ -0.37
ITGAV-208ENST00000496854 SPRYD3Q8NCJ5 442 aa12.74□□□□□ -0.37
ITGAV-208ENST00000496854 RNF17Q9BXT8 1623 aaKnown RBP12.73□□□□□ -0.37
ITGAV-208ENST00000496854 PZPP20742 1482 aa12.73□□□□□ -0.37
ITGAV-208ENST00000496854 KIF3CO14782 793 aa12.73□□□□□ -0.37
ITGAV-208ENST00000496854 DOK7Q18PE1 504 aa12.73□□□□□ -0.37
ITGAV-208ENST00000496854 DHX29Q7Z478 1369 aaKnown RBP12.72□□□□□ -0.37
ITGAV-208ENST00000496854 DISP3Q9P2K9 1392 aa12.72□□□□□ -0.37
ITGAV-208ENST00000496854 CFAP44Q96MT7 982 aa12.72□□□□□ -0.37
ITGAV-208ENST00000496854 ZC3H13Q5T200 1668 aaKnown RBP12.72□□□□□ -0.37
ITGAV-208ENST00000496854 MROH1Q8NDA8 1641 aa12.72□□□□□ -0.37
ITGAV-208ENST00000496854 MAST1Q9Y2H9 1570 aa12.72□□□□□ -0.37
ITGAV-208ENST00000496854 HOXB3P14651 431 aaPredicted RBP12.71□□□□□ -0.37
ITGAV-208ENST00000496854 PAXIP1Q6ZW49 1069 aaPredicted RBP12.71□□□□□ -0.37
ITGAV-208ENST00000496854 ZNF710Q8N1W2 664 aa12.71□□□□□ -0.37
ITGAV-208ENST00000496854 EIF2AK4Q9P2K8 1649 aaKnown RBP12.7□□□□□ -0.38
ITGAV-208ENST00000496854 ILDR2Q71H61 639 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms