RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 PLSCR2Q9NRY7 297 aa11.24□□□□□ -0.61
CHCHD3-206ENST00000496427 DHX29Q7Z478 1369 aaKnown RBP11.24□□□□□ -0.61
CHCHD3-206ENST00000496427 RTEL1-TNFRSF6BF6WH68 1400 aa11.24□□□□□ -0.61
CHCHD3-206ENST00000496427 CEP162Q5TB80 1403 aa11.24□□□□□ -0.61
CHCHD3-206ENST00000496427 FAM135AQ9P2D6 1515 aa11.24□□□□□ -0.61
CHCHD3-206ENST00000496427 UGGT1Q9NYU2 1555 aa11.24□□□□□ -0.61
CHCHD3-206ENST00000496427 C7P10643 843 aa11.23□□□□□ -0.61
CHCHD3-206ENST00000496427 HSPA1LP34931 641 aa11.23□□□□□ -0.61
CHCHD3-206ENST00000496427 MS4A3Q96HJ5 214 aa11.23□□□□□ -0.61
CHCHD3-206ENST00000496427 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.23□□□□□ -0.61
CHCHD3-206ENST00000496427 NCOA2Q15596 1464 aa11.23□□□□□ -0.61
CHCHD3-206ENST00000496427 ARHGEF5Q12774 1597 aa11.23□□□□□ -0.61
CHCHD3-206ENST00000496427 UBR1Q8IWV7 1749 aa11.23□□□□□ -0.61
CHCHD3-206ENST00000496427 SYNMO15061 1565 aa11.22□□□□□ -0.61
CHCHD3-206ENST00000496427 KIF3BO15066 747 aa11.22□□□□□ -0.61
CHCHD3-206ENST00000496427 PELP1Q8IZL8 1130 aaKnown RBP11.22□□□□□ -0.61
CHCHD3-206ENST00000496427 MROH1Q8NDA8 1641 aa11.22□□□□□ -0.61
CHCHD3-206ENST00000496427 METRNQ9UJH8 293 aa11.21□□□□□ -0.61
CHCHD3-206ENST00000496427 EIF2AK4Q9P2K8 1649 aaKnown RBP11.2□□□□□ -0.62
CHCHD3-206ENST00000496427 ATMINO43313 823 aaPredicted RBP11.2□□□□□ -0.62
CHCHD3-206ENST00000496427 ABCC3O15438 1527 aa11.19□□□□□ -0.62
CHCHD3-206ENST00000496427 NPHP4O75161 1426 aaPredicted RBP11.19□□□□□ -0.62
CHCHD3-206ENST00000496427 MAMSTRQ6ZN01 415 aa11.19□□□□□ -0.62
CHCHD3-206ENST00000496427 MAST1Q9Y2H9 1570 aa11.19□□□□□ -0.62
CHCHD3-206ENST00000496427 MED14O60244 1454 aa11.19□□□□□ -0.62
CHCHD3-206ENST00000496427 NLRP1Q9C000 1473 aa11.19□□□□□ -0.62
CHCHD3-206ENST00000496427 CROCC2H7BZ55 1655 aa11.18□□□□□ -0.62
CHCHD3-206ENST00000496427 PLEKHG5O94827 1062 aa11.18□□□□□ -0.62
CHCHD3-206ENST00000496427 MIA2Q96PC5 1412 aa11.18□□□□□ -0.62
CHCHD3-206ENST00000496427 WASHC2CQ9Y4E1 1318 aa11.16□□□□□ -0.62
CHCHD3-206ENST00000496427 LRRC7Q96NW7 1537 aa11.16□□□□□ -0.62
CHCHD3-206ENST00000496427 TOM1O60784 492 aa11.16□□□□□ -0.62
CHCHD3-206ENST00000496427 TSPYL2Q9H2G4 693 aaPredicted RBP11.16□□□□□ -0.62
CHCHD3-206ENST00000496427 ERVK-7P63135 1459 aa11.16□□□□□ -0.62
CHCHD3-206ENST00000496427 ANKLE2Q86XL3 938 aa11.15□□□□□ -0.62
CHCHD3-206ENST00000496427 CCDC61Q9Y6R9 512 aa11.15□□□□□ -0.62
CHCHD3-206ENST00000496427 PIK3C2BO00750 1634 aa11.14□□□□□ -0.63
CHCHD3-206ENST00000496427 POTEMA6NI47 508 aa11.14□□□□□ -0.63
CHCHD3-206ENST00000496427 MYO5BQ9ULV0 1848 aa11.12□□□□□ -0.63
CHCHD3-206ENST00000496427 THEMISQ8N1K5 641 aaPredicted RBP11.12□□□□□ -0.63
CHCHD3-206ENST00000496427 PCDH10Q9P2E7 1040 aa11.11□□□□□ -0.63
CHCHD3-206ENST00000496427 SETD1AO15047 1707 aaKnown RBP11.11□□□□□ -0.63
CHCHD3-206ENST00000496427 LRRC9Q6ZRR7 1453 aa11.11□□□□□ -0.63
CHCHD3-206ENST00000496427 PRDM15P57071 1507 aaPredicted RBP11.1□□□□□ -0.63
CHCHD3-206ENST00000496427 KIF12Q96FN5 646 aa11.1□□□□□ -0.63
CHCHD3-206ENST00000496427 SCAF11Q99590 1463 aaKnown RBP11.1□□□□□ -0.63
CHCHD3-206ENST00000496427 ROBO1Q9Y6N7 1651 aa11.09□□□□□ -0.63
CHCHD3-206ENST00000496427 POTEGQ6S5H5 508 aa11.09□□□□□ -0.63
CHCHD3-206ENST00000496427 SCUBE2Q9NQ36 999 aa11.09□□□□□ -0.63
CHCHD3-206ENST00000496427 SLIT1O75093 1534 aa11.09□□□□□ -0.63
CHCHD3-206ENST00000496427 DUOX2Q9NRD8 1548 aa11.09□□□□□ -0.63
CHCHD3-206ENST00000496427 TSPY4P0CV99 314 aa11.08□□□□□ -0.64
CHCHD3-206ENST00000496427 TSPY10P0CW01 314 aa11.08□□□□□ -0.64
CHCHD3-206ENST00000496427 ARHGAP23Q9P227 1491 aa11.07□□□□□ -0.64
CHCHD3-206ENST00000496427 PTPN23Q9H3S7 1636 aa11.07□□□□□ -0.64
CHCHD3-206ENST00000496427 ATN1P54259 1190 aaPredicted RBP11.07□□□□□ -0.64
CHCHD3-206ENST00000496427 RSPH4AQ5TD94 716 aa11.07□□□□□ -0.64
CHCHD3-206ENST00000496427 KDM5AP29375 1690 aaKnown RBP11.06□□□□□ -0.64
CHCHD3-206ENST00000496427 TIE1P35590 1138 aa11.06□□□□□ -0.64
CHCHD3-206ENST00000496427 MIER1Q8N108 512 aa11.06□□□□□ -0.64
CHCHD3-206ENST00000496427 MYOM3Q5VTT5 1437 aa11.06□□□□□ -0.64
CHCHD3-206ENST00000496427 VPS8Q8N3P4 1428 aa11.06□□□□□ -0.64
CHCHD3-206ENST00000496427 GCC2Q8IWJ2 1684 aa11.04□□□□□ -0.64
CHCHD3-206ENST00000496427 MAP3K1Q13233 1512 aa11.04□□□□□ -0.64
CHCHD3-206ENST00000496427 PHLPP1O60346 1717 aa11.04□□□□□ -0.64
CHCHD3-206ENST00000496427 POTEJP0CG39 1038 aa11.04□□□□□ -0.64
CHCHD3-206ENST00000496427 LTKP29376 864 aa11.04□□□□□ -0.64
CHCHD3-206ENST00000496427 KANK4Q5T7N3 995 aaPredicted RBP11.03□□□□□ -0.64
CHCHD3-206ENST00000496427 EFCAB6Q5THR3 1501 aa11.03□□□□□ -0.64
CHCHD3-206ENST00000496427 KIF15Q9NS87 1388 aa11.03□□□□□ -0.64
CHCHD3-206ENST00000496427 CHD2O14647 1828 aaKnown RBP11.02□□□□□ -0.64
CHCHD3-206ENST00000496427 BMP2KQ9NSY1 1161 aaPredicted RBP11.02□□□□□ -0.65
CHCHD3-206ENST00000496427 RGS17Q9UGC6 210 aaPredicted RBP11.02□□□□□ -0.65
CHCHD3-206ENST00000496427 NWD1Q149M9 1564 aa11.02□□□□□ -0.65
CHCHD3-206ENST00000496427 ARHGAP31Q2M1Z3 1444 aa11.01□□□□□ -0.65
CHCHD3-206ENST00000496427 ERBINQ96RT1 1412 aa11.01□□□□□ -0.65
CHCHD3-206ENST00000496427 ADGRB3O60242 1522 aa11.01□□□□□ -0.65
CHCHD3-206ENST00000496427 TXNDC2Q86VQ3 553 aa11.01□□□□□ -0.65
CHCHD3-206ENST00000496427 TET3O43151 1660 aa11.01□□□□□ -0.65
CHCHD3-206ENST00000496427 ABCC5O15440 1437 aa11.01□□□□□ -0.65
CHCHD3-206ENST00000496427 MAP3K13O43283 966 aa11□□□□□ -0.65
CHCHD3-206ENST00000496427 DAPK1P53355 1430 aa11□□□□□ -0.65
CHCHD3-206ENST00000496427 RBM33Q96EV2 1170 aaKnown RBP10.99□□□□□ -0.65
CHCHD3-206ENST00000496427 SGIP1Q9BQI5 828 aa10.99□□□□□ -0.65
CHCHD3-206ENST00000496427 ZBTB47Q9UFB7 747 aaPredicted RBP10.99□□□□□ -0.65
CHCHD3-206ENST00000496427 TMEM94Q12767 1356 aa10.99□□□□□ -0.65
CHCHD3-206ENST00000496427 TMEM2Q9UHN6 1383 aa10.99□□□□□ -0.65
CHCHD3-206ENST00000496427 RRP7BPQ9NSQ0 103 aa10.98□□□□□ -0.65
CHCHD3-206ENST00000496427 LMTK2Q8IWU2 1503 aa10.98□□□□□ -0.65
CHCHD3-206ENST00000496427 LOC105371045A0A1W2PR82 267 aa10.97□□□□□ -0.65
CHCHD3-206ENST00000496427 RASEFQ8IZ41 740 aa10.97□□□□□ -0.65
CHCHD3-206ENST00000496427 COL16A1Q07092 1604 aaPredicted RBP10.96□□□□□ -0.65
CHCHD3-206ENST00000496427 FAM135BQ49AJ0 1406 aa10.96□□□□□ -0.65
CHCHD3-206ENST00000496427 POTEAQ6S8J7 498 aa10.96□□□□□ -0.65
CHCHD3-206ENST00000496427 EID1Q9Y6B2 187 aa10.96□□□□□ -0.65
CHCHD3-206ENST00000496427 NKTRP30414 1462 aaKnown RBP10.95□□□□□ -0.66
CHCHD3-206ENST00000496427 KANK1Q14678 1352 aa10.95□□□□□ -0.66
CHCHD3-206ENST00000496427 PLCD3Q8N3E9 789 aa10.95□□□□□ -0.66
CHCHD3-206ENST00000496427 SLC26A8Q96RN1 970 aa10.95□□□□□ -0.66
CHCHD3-206ENST00000496427 TMEM131LA2VDJ0 1609 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms