RNA–Protein interactions for RNA: ENST00000494580.1

CTNNA3-204, Transcript of catenin alpha 3, humanhuman

TSL 3

Gene CTNNA3, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-204ENST00000494580 MLH3Q9UHC1 1453 aa7.93□□□□□ -1.14
CTNNA3-204ENST00000494580 DNMT1P26358 1616 aaKnown RBP7.92□□□□□ -1.14
CTNNA3-204ENST00000494580 ADAMTSL3P82987 1691 aa7.92□□□□□ -1.14
CTNNA3-204ENST00000494580 KDM4FA0A1W2PPD8 638 aa7.92□□□□□ -1.14
CTNNA3-204ENST00000494580 SOX12O15370 315 aa7.92□□□□□ -1.14
CTNNA3-204ENST00000494580 SLC39A7Q92504 469 aa7.92□□□□□ -1.14
CTNNA3-204ENST00000494580 PTPRKQ15262 1439 aa7.92□□□□□ -1.14
CTNNA3-204ENST00000494580 REREQ9P2R6 1566 aa7.92□□□□□ -1.14
CTNNA3-204ENST00000494580 POTEB2H3BUK9 544 aa7.91□□□□□ -1.14
CTNNA3-204ENST00000494580 C7P10643 843 aa7.91□□□□□ -1.14
CTNNA3-204ENST00000494580 IER5LQ5T953 404 aa7.91□□□□□ -1.14
CTNNA3-204ENST00000494580 ABCC5O15440 1437 aa7.91□□□□□ -1.14
CTNNA3-204ENST00000494580 C9orf84Q5VXU9 1444 aa7.91□□□□□ -1.14
CTNNA3-204ENST00000494580 PLEKHH2Q8IVE3 1493 aa7.91□□□□□ -1.14
CTNNA3-204ENST00000494580 MAST1Q9Y2H9 1570 aa7.91□□□□□ -1.14
CTNNA3-204ENST00000494580 MAGI2Q86UL8 1455 aa7.9□□□□□ -1.14
CTNNA3-204ENST00000494580 MIA2Q96PC5 1412 aa7.9□□□□□ -1.14
CTNNA3-204ENST00000494580 SEC24BO95487 1268 aa7.9□□□□□ -1.14
CTNNA3-204ENST00000494580 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.9□□□□□ -1.14
CTNNA3-204ENST00000494580 RIMS1Q86UR5 1692 aaKnown RBP7.89□□□□□ -1.15
CTNNA3-204ENST00000494580 MROH1Q8NDA8 1641 aa7.89□□□□□ -1.15
CTNNA3-204ENST00000494580 DAPK1P53355 1430 aa7.89□□□□□ -1.15
CTNNA3-204ENST00000494580 NKX1-1Q15270 411 aaPredicted RBP7.89□□□□□ -1.15
CTNNA3-204ENST00000494580 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.89□□□□□ -1.15
CTNNA3-204ENST00000494580 METRNQ9UJH8 293 aa7.89□□□□□ -1.15
CTNNA3-204ENST00000494580 PHF8Q9UPP1 1060 aa7.89□□□□□ -1.15
CTNNA3-204ENST00000494580 FER1L4A9Z1Z3 1794 aa7.89□□□□□ -1.15
CTNNA3-204ENST00000494580 ATP10AO60312 1499 aa7.88□□□□□ -1.15
CTNNA3-204ENST00000494580 SHANK2Q9UPX8 1470 aa7.88□□□□□ -1.15
CTNNA3-204ENST00000494580 OCEL1Q9H607 264 aa7.88□□□□□ -1.15
CTNNA3-204ENST00000494580 NLRP6P59044 892 aa7.87□□□□□ -1.15
CTNNA3-204ENST00000494580 IRX5P78411 483 aaPredicted RBP7.87□□□□□ -1.15
CTNNA3-204ENST00000494580 MFRPQ9BY79 579 aa7.87□□□□□ -1.15
CTNNA3-204ENST00000494580 A2MP01023 1474 aa7.87□□□□□ -1.15
CTNNA3-204ENST00000494580 RRBP1Q9P2E9 1410 aaKnown RBP7.86□□□□□ -1.15
CTNNA3-204ENST00000494580 PLCG2P16885 1265 aa7.86□□□□□ -1.15
CTNNA3-204ENST00000494580 COLQQ9Y215 455 aaPredicted RBP7.86□□□□□ -1.15
CTNNA3-204ENST00000494580 AGLP35573 1532 aa7.86□□□□□ -1.15
CTNNA3-204ENST00000494580 SPAG9O60271 1321 aaKnown RBP7.85□□□□□ -1.15
CTNNA3-204ENST00000494580 RNF17Q9BXT8 1623 aaKnown RBP7.85□□□□□ -1.15
CTNNA3-204ENST00000494580 ADGRL2O95490 1459 aa7.84□□□□□ -1.15
CTNNA3-204ENST00000494580 PTPRMP28827 1452 aa7.84□□□□□ -1.15
CTNNA3-204ENST00000494580 POTEFA5A3E0 1075 aa7.84□□□□□ -1.15
CTNNA3-204ENST00000494580 MLECQ14165 292 aa7.84□□□□□ -1.15
CTNNA3-204ENST00000494580 PAXIP1Q6ZW49 1069 aaPredicted RBP7.84□□□□□ -1.15
CTNNA3-204ENST00000494580 SPRYD3Q8NCJ5 442 aa7.84□□□□□ -1.15
CTNNA3-204ENST00000494580 FBXO22Q8NEZ5 403 aa7.84□□□□□ -1.15
CTNNA3-204ENST00000494580 RTEL1-TNFRSF6BF6WH68 1400 aa7.84□□□□□ -1.15
CTNNA3-204ENST00000494580 CLTCQ00610 1675 aaKnown RBP7.83□□□□□ -1.16
CTNNA3-204ENST00000494580 GTPBP6O43824 516 aaPredicted RBP7.83□□□□□ -1.16
CTNNA3-204ENST00000494580 DPY19L2Q6NUT2 758 aa7.83□□□□□ -1.16
CTNNA3-204ENST00000494580 ILDR1Q86SU0 546 aaPredicted RBP7.83□□□□□ -1.16
CTNNA3-204ENST00000494580 CFAP44Q96MT7 982 aa7.83□□□□□ -1.16
CTNNA3-204ENST00000494580 CEP152O94986 1710 aa7.83□□□□□ -1.16
CTNNA3-204ENST00000494580 KIF15Q9NS87 1388 aa7.83□□□□□ -1.16
CTNNA3-204ENST00000494580 C3P01024 1663 aa7.83□□□□□ -1.16
CTNNA3-204ENST00000494580 DEPDC5O75140 1603 aa7.82□□□□□ -1.16
CTNNA3-204ENST00000494580 FAM50AQ14320 339 aaKnown RBP7.82□□□□□ -1.16
CTNNA3-204ENST00000494580 PDCD7Q8N8D1 485 aaKnown RBP7.82□□□□□ -1.16
CTNNA3-204ENST00000494580 MS4A4AQ96JQ5 239 aa7.82□□□□□ -1.16
CTNNA3-204ENST00000494580 RYDENQ9NUL5 291 aaKnown RBP7.82□□□□□ -1.16
CTNNA3-204ENST00000494580 PRDM15P57071 1507 aaPredicted RBP7.82□□□□□ -1.16
CTNNA3-204ENST00000494580 EIF2AK4Q9P2K8 1649 aaKnown RBP7.81□□□□□ -1.16
CTNNA3-204ENST00000494580 ARID4BQ4LE39 1312 aaPredicted RBP7.81□□□□□ -1.16
CTNNA3-204ENST00000494580 CHIC2Q9UKJ5 165 aa7.81□□□□□ -1.16
CTNNA3-204ENST00000494580 ABCC3O15438 1527 aa7.81□□□□□ -1.16
CTNNA3-204ENST00000494580 DUOX2Q9NRD8 1548 aa7.81□□□□□ -1.16
CTNNA3-204ENST00000494580 GCC2Q8IWJ2 1684 aa7.8□□□□□ -1.16
CTNNA3-204ENST00000494580 NCOA1Q15788 1441 aa7.8□□□□□ -1.16
CTNNA3-204ENST00000494580 MYT1LQ9UL68 1186 aa7.8□□□□□ -1.16
CTNNA3-204ENST00000494580 DHX29Q7Z478 1369 aaKnown RBP7.8□□□□□ -1.16
CTNNA3-204ENST00000494580 KDM5DQ9BY66 1539 aa7.79□□□□□ -1.16
CTNNA3-204ENST00000494580 PPP1R37O75864 691 aa7.79□□□□□ -1.16
CTNNA3-204ENST00000494580 UNC13BO14795 1591 aa7.79□□□□□ -1.16
CTNNA3-204ENST00000494580 VWDEQ8N2E2 1590 aa7.79□□□□□ -1.16
CTNNA3-204ENST00000494580 MROH2AA6NES4 1674 aa7.79□□□□□ -1.16
CTNNA3-204ENST00000494580 ERBINQ96RT1 1412 aa7.78□□□□□ -1.16
CTNNA3-204ENST00000494580 CAMSAP1Q5T5Y3 1602 aa7.78□□□□□ -1.16
CTNNA3-204ENST00000494580 SLC24A1O60721 1099 aa7.78□□□□□ -1.16
CTNNA3-204ENST00000494580 L3MBTL3Q96JM7 780 aaPredicted RBP7.78□□□□□ -1.16
CTNNA3-204ENST00000494580 LMTK3Q96Q04 1460 aa7.78□□□□□ -1.16
CTNNA3-204ENST00000494580 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.77□□□□□ -1.17
CTNNA3-204ENST00000494580 G3V3G9 751 aa7.77□□□□□ -1.17
CTNNA3-204ENST00000494580 ITGAEP38570 1179 aa7.77□□□□□ -1.17
CTNNA3-204ENST00000494580 CEBPAP49715 358 aaPredicted RBP7.77□□□□□ -1.17
CTNNA3-204ENST00000494580 RRP7BPQ9NSQ0 103 aa7.77□□□□□ -1.17
CTNNA3-204ENST00000494580 MYO3AQ8NEV4 1616 aa7.77□□□□□ -1.17
CTNNA3-204ENST00000494580 NAIPQ13075 1403 aa7.76□□□□□ -1.17
CTNNA3-204ENST00000494580 ZC3H13Q5T200 1668 aaKnown RBP7.76□□□□□ -1.17
CTNNA3-204ENST00000494580 ROCK1Q13464 1354 aa7.75□□□□□ -1.17
CTNNA3-204ENST00000494580 EFCAB6Q5THR3 1501 aa7.75□□□□□ -1.17
CTNNA3-204ENST00000494580 KIF3BO15066 747 aa7.75□□□□□ -1.17
CTNNA3-204ENST00000494580 PLCB2Q00722 1185 aa7.75□□□□□ -1.17
CTNNA3-204ENST00000494580 BOLA1Q9Y3E2 137 aa7.75□□□□□ -1.17
CTNNA3-204ENST00000494580 ANKRD50Q9ULJ7 1429 aa7.75□□□□□ -1.17
CTNNA3-204ENST00000494580 ANKRD30AQ9BXX3 1397 aa7.74□□□□□ -1.17
CTNNA3-204ENST00000494580 PREX1Q8TCU6 1659 aa7.74□□□□□ -1.17
CTNNA3-204ENST00000494580 LCE2DQ5TA82 110 aaPredicted RBP7.74□□□□□ -1.17
CTNNA3-204ENST00000494580 GGT6Q6P531 493 aa7.74□□□□□ -1.17
CTNNA3-204ENST00000494580 NPATQ14207 1427 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms