RNA–Protein interactions for RNA: ENST00000494422.1

BRD9-211, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-211ENST00000494422 PCGF6Q9BYE7 350 aa9.39□□□□□ -0.91
BRD9-211ENST00000494422 FXR2P51116 673 aaKnown RBP eCLIP9.38□□□□□ -0.91
BRD9-211ENST00000494422 KDM5AP29375 1690 aaKnown RBP9.38□□□□□ -0.91
BRD9-211ENST00000494422 TRPM2O94759 1503 aa9.37□□□□□ -0.91
BRD9-211ENST00000494422 A2ML1A8K2U0 1454 aa9.37□□□□□ -0.91
BRD9-211ENST00000494422 CEBPAP49715 358 aaPredicted RBP9.37□□□□□ -0.91
BRD9-211ENST00000494422 SPHKAPQ2M3C7 1700 aa9.36□□□□□ -0.91
BRD9-211ENST00000494422 ZNF142P52746 1687 aaPredicted RBP9.36□□□□□ -0.91
BRD9-211ENST00000494422 CLSPNQ9HAW4 1339 aa9.35□□□□□ -0.91
BRD9-211ENST00000494422 MYO3AQ8NEV4 1616 aa9.35□□□□□ -0.91
BRD9-211ENST00000494422 HDGFP51858 240 aaKnown RBP9.35□□□□□ -0.91
BRD9-211ENST00000494422 FBXO31Q5XUX0 539 aaPredicted RBP9.35□□□□□ -0.91
BRD9-211ENST00000494422 THEMISQ8N1K5 641 aaPredicted RBP9.35□□□□□ -0.91
BRD9-211ENST00000494422 NEURL4Q96JN8 1562 aa9.35□□□□□ -0.91
BRD9-211ENST00000494422 PIK3C2BO00750 1634 aa9.34□□□□□ -0.91
BRD9-211ENST00000494422 UGGT1Q9NYU2 1555 aa9.34□□□□□ -0.91
BRD9-211ENST00000494422 CEP170BQ9Y4F5 1589 aaPredicted RBP9.34□□□□□ -0.91
BRD9-211ENST00000494422 CCDC144AA2RUR9 1427 aa9.34□□□□□ -0.91
BRD9-211ENST00000494422 SYNMO15061 1565 aa9.33□□□□□ -0.92
BRD9-211ENST00000494422 HAX1O00165 279 aa9.33□□□□□ -0.92
BRD9-211ENST00000494422 ZBTB22O15209 634 aa9.33□□□□□ -0.92
BRD9-211ENST00000494422 STAC3Q96MF2 364 aa9.33□□□□□ -0.92
BRD9-211ENST00000494422 STAG3Q9UJ98 1225 aa9.33□□□□□ -0.92
BRD9-211ENST00000494422 ANKRD30BQ9BXX2 1392 aa9.33□□□□□ -0.92
BRD9-211ENST00000494422 PLA2R1Q13018 1463 aa9.33□□□□□ -0.92
BRD9-211ENST00000494422 ADGRB3O60242 1522 aa9.32□□□□□ -0.92
BRD9-211ENST00000494422 EVX2Q03828 476 aa9.32□□□□□ -0.92
BRD9-211ENST00000494422 IDI1Q13907 227 aa9.32□□□□□ -0.92
BRD9-211ENST00000494422 LMTK3Q96Q04 1460 aa9.32□□□□□ -0.92
BRD9-211ENST00000494422 RPGRIP1LQ68CZ1 1315 aa9.31□□□□□ -0.92
BRD9-211ENST00000494422 DHX57Q6P158 1386 aaKnown RBP9.31□□□□□ -0.92
BRD9-211ENST00000494422 CFAP65Q6ZU64 1925 aaKnown RBP9.31□□□□□ -0.92
BRD9-211ENST00000494422 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.3□□□□□ -0.92
BRD9-211ENST00000494422 KIF1BO60333 1816 aa9.3□□□□□ -0.92
BRD9-211ENST00000494422 UBR1Q8IWV7 1749 aa9.3□□□□□ -0.92
BRD9-211ENST00000494422 SLIT1O75093 1534 aa9.3□□□□□ -0.92
BRD9-211ENST00000494422 EID1Q9Y6B2 187 aa9.29□□□□□ -0.92
BRD9-211ENST00000494422 TMEM131LA2VDJ0 1609 aa9.29□□□□□ -0.92
BRD9-211ENST00000494422 CLTCL1P53675 1640 aa9.29□□□□□ -0.92
BRD9-211ENST00000494422 ARHGAP23Q9P227 1491 aa9.28□□□□□ -0.92
BRD9-211ENST00000494422 TMEM2Q9UHN6 1383 aa9.28□□□□□ -0.92
BRD9-211ENST00000494422 ANKLE2Q86XL3 938 aa9.28□□□□□ -0.92
BRD9-211ENST00000494422 ZFYVE9O95405 1425 aa9.26□□□□□ -0.93
BRD9-211ENST00000494422 SPATA31E1Q6ZUB1 1445 aa9.26□□□□□ -0.93
BRD9-211ENST00000494422 VGFO15240 615 aaPredicted RBP9.26□□□□□ -0.93
BRD9-211ENST00000494422 CHGAP10645 457 aaKnown RBP9.26□□□□□ -0.93
BRD9-211ENST00000494422 TIMELESSQ9UNS1 1208 aa9.26□□□□□ -0.93
BRD9-211ENST00000494422 MED14O60244 1454 aa9.26□□□□□ -0.93
BRD9-211ENST00000494422 SCAF11Q99590 1463 aaKnown RBP9.26□□□□□ -0.93
BRD9-211ENST00000494422 ZNF326Q5BKZ1 582 aaKnown RBP9.25□□□□□ -0.93
BRD9-211ENST00000494422 RIMS2Q9UQ26 1411 aa9.24□□□□□ -0.93
BRD9-211ENST00000494422 TXNDC2Q86VQ3 553 aa9.24□□□□□ -0.93
BRD9-211ENST00000494422 POLR1AO95602 1720 aaPredicted RBP9.23□□□□□ -0.93
BRD9-211ENST00000494422 CCER1Q8TC90 406 aaPredicted RBP9.23□□□□□ -0.93
BRD9-211ENST00000494422 DAXXQ9UER7 740 aaPredicted RBP9.23□□□□□ -0.93
BRD9-211ENST00000494422 PLEKHG1Q9ULL1 1385 aa9.23□□□□□ -0.93
BRD9-211ENST00000494422 MYOM2P54296 1465 aa9.22□□□□□ -0.93
BRD9-211ENST00000494422 NEXMIFQ5QGS0 1516 aa9.22□□□□□ -0.93
BRD9-211ENST00000494422 PPP1R15AO75807 674 aaPredicted RBP9.22□□□□□ -0.93
BRD9-211ENST00000494422 NPHP4O75161 1426 aaPredicted RBP9.22□□□□□ -0.93
BRD9-211ENST00000494422 DIP2AQ14689 1571 aa9.21□□□□□ -0.93
BRD9-211ENST00000494422 HSPA2P54652 639 aa9.21□□□□□ -0.94
BRD9-211ENST00000494422 PPLO60437 1756 aa9.21□□□□□ -0.94
BRD9-211ENST00000494422 MYO5BQ9ULV0 1848 aa9.21□□□□□ -0.94
BRD9-211ENST00000494422 RGL3Q3MIN7 710 aa9.2□□□□□ -0.94
BRD9-211ENST00000494422 TONSLQ96HA7 1378 aa9.2□□□□□ -0.94
BRD9-211ENST00000494422 PIK3R4Q99570 1358 aa9.2□□□□□ -0.94
BRD9-211ENST00000494422 SETBP1Q9Y6X0 1596 aa9.2□□□□□ -0.94
BRD9-211ENST00000494422 IQGAP1P46940 1657 aa9.2□□□□□ -0.94
BRD9-211ENST00000494422 IFT172Q9UG01 1749 aa9.19□□□□□ -0.94
BRD9-211ENST00000494422 STRCQ7RTU9 1775 aa9.19□□□□□ -0.94
BRD9-211ENST00000494422 LTKP29376 864 aa9.19□□□□□ -0.94
BRD9-211ENST00000494422 TBX22Q9Y458 520 aa9.19□□□□□ -0.94
BRD9-211ENST00000494422 NRXN1Q9ULB1 1477 aa9.19□□□□□ -0.94
BRD9-211ENST00000494422 LAMC1P11047 1609 aa9.18□□□□□ -0.94
BRD9-211ENST00000494422 PRKCSHP14314 528 aaPredicted RBP9.18□□□□□ -0.94
BRD9-211ENST00000494422 PIK3C2GO75747 1445 aa9.17□□□□□ -0.94
BRD9-211ENST00000494422 NCKAP5LQ9HCH0 1330 aa9.17□□□□□ -0.94
BRD9-211ENST00000494422 NEUROD1Q13562 356 aa9.17□□□□□ -0.94
BRD9-211ENST00000494422 DCAF11Q8TEB1 546 aa9.17□□□□□ -0.94
BRD9-211ENST00000494422 SIN3AQ96ST3 1273 aa9.17□□□□□ -0.94
BRD9-211ENST00000494422 SPDYE2BA6NHP3 402 aa9.16□□□□□ -0.94
BRD9-211ENST00000494422 SPDYE6P0CI01 402 aa9.16□□□□□ -0.94
BRD9-211ENST00000494422 SPDYE2Q495Y8 402 aa9.16□□□□□ -0.94
BRD9-211ENST00000494422 BCANQ96GW7 911 aa9.16□□□□□ -0.94
BRD9-211ENST00000494422 KIAA1210Q9ULL0 1709 aa9.15□□□□□ -0.94
BRD9-211ENST00000494422 ATXN8OSP0DMR3 200 aa9.15□□□□□ -0.94
BRD9-211ENST00000494422 L3MBTL2Q969R5 705 aa9.15□□□□□ -0.94
BRD9-211ENST00000494422 C14orf93Q9H972 538 aaKnown RBP9.15□□□□□ -0.94
BRD9-211ENST00000494422 ADAMTS13Q76LX8 1427 aa9.14□□□□□ -0.95
BRD9-211ENST00000494422 ADGRF5Q8IZF2 1346 aa9.14□□□□□ -0.95
BRD9-211ENST00000494422 ALKQ9UM73 1620 aa9.14□□□□□ -0.95
BRD9-211ENST00000494422 PRAG1Q86YV5 1406 aa9.14□□□□□ -0.95
BRD9-211ENST00000494422 KCNA6P17658 529 aa9.13□□□□□ -0.95
BRD9-211ENST00000494422 CPS1P31327 1500 aa9.13□□□□□ -0.95
BRD9-211ENST00000494422 NCOA3Q9Y6Q9 1424 aa9.13□□□□□ -0.95
BRD9-211ENST00000494422 NRXN3Q9Y4C0 1643 aa9.13□□□□□ -0.95
BRD9-211ENST00000494422 MKRN4PQ13434 485 aaPredicted RBP9.12□□□□□ -0.95
BRD9-211ENST00000494422 NUTM2DQ5VT03 806 aaPredicted RBP9.12□□□□□ -0.95
BRD9-211ENST00000494422 SIRT1Q96EB6 747 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms