RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 SOCS7O14512 581 aa9.94□□□□□ -0.82
SNX13-210ENST00000494402 TCF3P15923 654 aa9.94□□□□□ -0.82
SNX13-210ENST00000494402 OSBPP22059 807 aa9.94□□□□□ -0.82
SNX13-210ENST00000494402 TSR1Q2NL82 804 aaKnown RBP9.94□□□□□ -0.82
SNX13-210ENST00000494402 TXNDC2Q86VQ3 553 aa9.94□□□□□ -0.82
SNX13-210ENST00000494402 MDM2Q00987 491 aaPredicted RBP9.93□□□□□ -0.82
SNX13-210ENST00000494402 MYSM1Q5VVJ2 828 aa9.93□□□□□ -0.82
SNX13-210ENST00000494402 C7P10643 843 aa9.92□□□□□ -0.82
SNX13-210ENST00000494402 ARID4BQ4LE39 1312 aaPredicted RBP9.91□□□□□ -0.82
SNX13-210ENST00000494402 IER5LQ5T953 404 aa9.91□□□□□ -0.82
SNX13-210ENST00000494402 HDGFL1Q5TGJ6 251 aa9.91□□□□□ -0.82
SNX13-210ENST00000494402 SLC39A7Q92504 469 aa9.91□□□□□ -0.82
SNX13-210ENST00000494402 PTGDRQ13258 359 aa9.9□□□□□ -0.82
SNX13-210ENST00000494402 SIRT1Q96EB6 747 aa9.9□□□□□ -0.82
SNX13-210ENST00000494402 TMEM88BA6NKF7 163 aa9.89□□□□□ -0.83
SNX13-210ENST00000494402 ZNF16P17020 682 aaPredicted RBP9.88□□□□□ -0.83
SNX13-210ENST00000494402 PPP2R2DQ66LE6 453 aa9.88□□□□□ -0.83
SNX13-210ENST00000494402 CDAN1Q8IWY9 1227 aa9.88□□□□□ -0.83
SNX13-210ENST00000494402 FAM9AQ8IZU1 332 aaPredicted RBP9.88□□□□□ -0.83
SNX13-210ENST00000494402 CCER1Q8TC90 406 aaPredicted RBP9.88□□□□□ -0.83
SNX13-210ENST00000494402 UBXN4Q92575 508 aa9.88□□□□□ -0.83
SNX13-210ENST00000494402 PPP1R12CQ9BZL4 782 aa9.88□□□□□ -0.83
SNX13-210ENST00000494402 OCEL1Q9H607 264 aa9.88□□□□□ -0.83
SNX13-210ENST00000494402 SCUBE2Q9NQ36 999 aa9.88□□□□□ -0.83
SNX13-210ENST00000494402 TBC1D2BQ9UPU7 963 aa9.88□□□□□ -0.83
SNX13-210ENST00000494402 IRX5P78411 483 aaPredicted RBP9.87□□□□□ -0.83
SNX13-210ENST00000494402 PDCD7Q8N8D1 485 aaKnown RBP9.87□□□□□ -0.83
SNX13-210ENST00000494402 CADPSQ9ULU8 1353 aa9.87□□□□□ -0.83
SNX13-210ENST00000494402 ATG7O95352 703 aa9.86□□□□□ -0.83
SNX13-210ENST00000494402 DPY19L2Q6NUT2 758 aa9.86□□□□□ -0.83
SNX13-210ENST00000494402 DNAJC14Q6Y2X3 702 aaPredicted RBP9.86□□□□□ -0.83
SNX13-210ENST00000494402 UBE2Q2Q8WVN8 375 aa9.86□□□□□ -0.83
SNX13-210ENST00000494402 BCL2L13Q9BXK5 485 aa9.86□□□□□ -0.83
SNX13-210ENST00000494402 ZC3H6P61129 1189 aaKnown RBP9.85□□□□□ -0.83
SNX13-210ENST00000494402 DSG2Q14126 1118 aa9.85□□□□□ -0.83
SNX13-210ENST00000494402 DIXDC1Q155Q3 683 aa9.85□□□□□ -0.83
SNX13-210ENST00000494402 FAM217BQ9NTX9 383 aaPredicted RBP9.85□□□□□ -0.83
SNX13-210ENST00000494402 PLCG2P16885 1265 aa9.84□□□□□ -0.83
SNX13-210ENST00000494402 SF3A1Q15459 793 aaKnown RBP9.84□□□□□ -0.83
SNX13-210ENST00000494402 ADAMTS19Q8TE59 1207 aa9.84□□□□□ -0.83
SNX13-210ENST00000494402 MAP3K9P80192 1104 aa9.83□□□□□ -0.84
SNX13-210ENST00000494402 ANKRD62A6NC57 917 aa9.82□□□□□ -0.84
SNX13-210ENST00000494402 G3V3G9 751 aa9.82□□□□□ -0.84
SNX13-210ENST00000494402 LMOD1P29536 600 aaPredicted RBP9.82□□□□□ -0.84
SNX13-210ENST00000494402 WASHC4Q2M389 1173 aa9.82□□□□□ -0.84
SNX13-210ENST00000494402 CERS3Q8IU89 383 aa9.82□□□□□ -0.84
SNX13-210ENST00000494402 MICALL2Q8IY33 904 aa9.82□□□□□ -0.84
SNX13-210ENST00000494402 PALM3A6NDB9 673 aaPredicted RBP9.81□□□□□ -0.84
SNX13-210ENST00000494402 SEC24BO95487 1268 aa9.81□□□□□ -0.84
SNX13-210ENST00000494402 PTGER2P43116 358 aa9.81□□□□□ -0.84
SNX13-210ENST00000494402 FBXO31Q5XUX0 539 aaPredicted RBP9.8□□□□□ -0.84
SNX13-210ENST00000494402 TBC1D2Q9BYX2 928 aa9.8□□□□□ -0.84
SNX13-210ENST00000494402 FOXK1P85037 733 aa9.79□□□□□ -0.84
SNX13-210ENST00000494402 GIPC2Q8TF65 315 aa9.79□□□□□ -0.84
SNX13-210ENST00000494402 L3MBTL3Q96JM7 780 aaPredicted RBP9.79□□□□□ -0.84
SNX13-210ENST00000494402 PPP1R1BQ9UD71 204 aaPredicted RBP9.79□□□□□ -0.84
SNX13-210ENST00000494402 BOLA1Q9Y3E2 137 aa9.79□□□□□ -0.84
SNX13-210ENST00000494402 VAMP1P23763 118 aa9.78□□□□□ -0.84
SNX13-210ENST00000494402 PHOX2BQ99453 314 aa9.78□□□□□ -0.84
SNX13-210ENST00000494402 HIRIP3Q9BW71 556 aaPredicted RBP9.78□□□□□ -0.84
SNX13-210ENST00000494402 CC2D2BQ6DHV5 1058 aa9.77□□□□□ -0.85
SNX13-210ENST00000494402 DDX12PQ92771 950 aa9.77□□□□□ -0.85
SNX13-210ENST00000494402 PSMD1Q99460 953 aa9.77□□□□□ -0.85
SNX13-210ENST00000494402 TMEM121BQ9BXQ6 578 aaPredicted RBP9.77□□□□□ -0.85
SNX13-210ENST00000494402 LIMD1Q9UGP4 676 aa9.77□□□□□ -0.85
SNX13-210ENST00000494402 NDUFB9Q9Y6M9 179 aa9.77□□□□□ -0.85
SNX13-210ENST00000494402 ZC3H4Q9UPT8 1303 aaKnown RBP9.77□□□□□ -0.85
SNX13-210ENST00000494402 ZNF326Q5BKZ1 582 aaKnown RBP9.76□□□□□ -0.85
SNX13-210ENST00000494402 TUSC1Q2TAM9 212 aa9.75□□□□□ -0.85
SNX13-210ENST00000494402 NAALADL2Q58DX5 795 aa9.75□□□□□ -0.85
SNX13-210ENST00000494402 TMC2Q8TDI7 906 aa9.75□□□□□ -0.85
SNX13-210ENST00000494402 COLQQ9Y215 455 aaPredicted RBP9.75□□□□□ -0.85
SNX13-210ENST00000494402 KDM4AO75164 1064 aa9.74□□□□□ -0.85
SNX13-210ENST00000494402 CDCA8Q53HL2 280 aa9.74□□□□□ -0.85
SNX13-210ENST00000494402 TFIP11Q9UBB9 837 aaKnown RBP9.74□□□□□ -0.85
SNX13-210ENST00000494402 NOL8Q76FK4 1167 aaKnown RBP9.73□□□□□ -0.85
SNX13-210ENST00000494402 RIC3Q7Z5B4 369 aa9.73□□□□□ -0.85
SNX13-210ENST00000494402 POTEFA5A3E0 1075 aa9.72□□□□□ -0.85
SNX13-210ENST00000494402 AP1G2O75843 785 aa9.72□□□□□ -0.85
SNX13-210ENST00000494402 PRIM1P49642 420 aaKnown RBP9.72□□□□□ -0.85
SNX13-210ENST00000494402 MMRN1Q13201 1228 aa9.72□□□□□ -0.85
SNX13-210ENST00000494402 ZNF710Q8N1W2 664 aa9.72□□□□□ -0.85
SNX13-210ENST00000494402 ZNF592Q92610 1267 aa9.72□□□□□ -0.85
SNX13-210ENST00000494402 ARID4AP29374 1257 aaPredicted RBP9.71□□□□□ -0.86
SNX13-210ENST00000494402 PLPP6Q8IY26 295 aa9.71□□□□□ -0.86
SNX13-210ENST00000494402 ALG2Q9H553 416 aa9.71□□□□□ -0.86
SNX13-210ENST00000494402 USP17L8P0C7I0 530 aa9.7□□□□□ -0.86
SNX13-210ENST00000494402 MARSP56192 900 aaKnown RBP9.7□□□□□ -0.86
SNX13-210ENST00000494402 NOM1Q5C9Z4 860 aaKnown RBP9.7□□□□□ -0.86
SNX13-210ENST00000494402 C2orf72A6NCS6 295 aa9.68□□□□□ -0.86
SNX13-210ENST00000494402 SOWAHDA6NJG2 315 aa9.68□□□□□ -0.86
SNX13-210ENST00000494402 ELOAQ14241 798 aaKnown RBP9.68□□□□□ -0.86
SNX13-210ENST00000494402 GIMAP6Q6P9H5 292 aa9.68□□□□□ -0.86
SNX13-210ENST00000494402 UCN2Q96RP3 112 aa9.68□□□□□ -0.86
SNX13-210ENST00000494402 BCL11AQ9H165 835 aa9.68□□□□□ -0.86
SNX13-210ENST00000494402 MAFBQ9Y5Q3 323 aaPredicted RBP9.68□□□□□ -0.86
SNX13-210ENST00000494402 KIF3CO14782 793 aa9.67□□□□□ -0.86
SNX13-210ENST00000494402 OATP04181 439 aa9.67□□□□□ -0.86
SNX13-210ENST00000494402 VAC14Q08AM6 782 aa9.67□□□□□ -0.86
SNX13-210ENST00000494402 SPTLC1O15269 473 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms