RNA–Protein interactions for RNA: ENST00000489740.1

LTBP1-211, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

TSL 3

Gene LTBP1, Length 505 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-211ENST00000489740 POLR1AO95602 1720 aaPredicted RBP10.43□□□□□ -0.74
LTBP1-211ENST00000489740 SYCP2Q9BX26 1530 aa10.43□□□□□ -0.74
LTBP1-211ENST00000489740 HNRNPMP52272 730 aaKnown RBP eCLIP10.42□□□□□ -0.74
LTBP1-211ENST00000489740 NEURL4Q96JN8 1562 aa10.42□□□□□ -0.74
LTBP1-211ENST00000489740 KIAA1107Q9UPP5 1409 aa10.41□□□□□ -0.74
LTBP1-211ENST00000489740 INO80Q9ULG1 1556 aaPredicted RBP10.41□□□□□ -0.74
LTBP1-211ENST00000489740 ANKLE2Q86XL3 938 aa10.41□□□□□ -0.74
LTBP1-211ENST00000489740 PLEKHH2Q8IVE3 1493 aa10.41□□□□□ -0.74
LTBP1-211ENST00000489740 ALKQ9UM73 1620 aa10.4□□□□□ -0.74
LTBP1-211ENST00000489740 VWDEQ8N2E2 1590 aa10.4□□□□□ -0.74
LTBP1-211ENST00000489740 SGIP1Q9BQI5 828 aa10.4□□□□□ -0.74
LTBP1-211ENST00000489740 CASKIN1Q8WXD9 1431 aa10.4□□□□□ -0.75
LTBP1-211ENST00000489740 GPATCH8Q9UKJ3 1502 aaKnown RBP10.39□□□□□ -0.75
LTBP1-211ENST00000489740 ADGBQ8N7X0 1667 aa10.39□□□□□ -0.75
LTBP1-211ENST00000489740 SNPHO15079 494 aa10.39□□□□□ -0.75
LTBP1-211ENST00000489740 THEMISQ8N1K5 641 aaPredicted RBP10.39□□□□□ -0.75
LTBP1-211ENST00000489740 TRIM35Q9UPQ4 493 aa10.39□□□□□ -0.75
LTBP1-211ENST00000489740 TNRQ92752 1358 aa10.39□□□□□ -0.75
LTBP1-211ENST00000489740 MED14O60244 1454 aa10.38□□□□□ -0.75
LTBP1-211ENST00000489740 PLEKHG5O94827 1062 aa10.38□□□□□ -0.75
LTBP1-211ENST00000489740 CFDP1Q9UEE9 299 aaPredicted RBP10.38□□□□□ -0.75
LTBP1-211ENST00000489740 RGS17Q9UGC6 210 aaPredicted RBP10.38□□□□□ -0.75
LTBP1-211ENST00000489740 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.38□□□□□ -0.75
LTBP1-211ENST00000489740 NPHP4O75161 1426 aaPredicted RBP10.37□□□□□ -0.75
LTBP1-211ENST00000489740 FBXO31Q5XUX0 539 aaPredicted RBP10.37□□□□□ -0.75
LTBP1-211ENST00000489740 DEPDC5O75140 1603 aa10.36□□□□□ -0.75
LTBP1-211ENST00000489740 PZPP20742 1482 aa10.36□□□□□ -0.75
LTBP1-211ENST00000489740 FAM135AQ9P2D6 1515 aa10.35□□□□□ -0.75
LTBP1-211ENST00000489740 DHX29Q7Z478 1369 aaKnown RBP10.35□□□□□ -0.75
LTBP1-211ENST00000489740 NLRP1Q9C000 1473 aa10.35□□□□□ -0.75
LTBP1-211ENST00000489740 MIA2Q96PC5 1412 aa10.34□□□□□ -0.75
LTBP1-211ENST00000489740 LRRC7Q96NW7 1537 aa10.34□□□□□ -0.75
LTBP1-211ENST00000489740 RNF17Q9BXT8 1623 aaKnown RBP10.34□□□□□ -0.75
LTBP1-211ENST00000489740 CCNB3Q8WWL7 1395 aa10.34□□□□□ -0.75
LTBP1-211ENST00000489740 UGGT1Q9NYU2 1555 aa10.34□□□□□ -0.75
LTBP1-211ENST00000489740 IQGAP1P46940 1657 aa10.34□□□□□ -0.75
LTBP1-211ENST00000489740 RTEL1-TNFRSF6BF6WH68 1400 aa10.33□□□□□ -0.76
LTBP1-211ENST00000489740 FYCO1Q9BQS8 1478 aa10.33□□□□□ -0.76
LTBP1-211ENST00000489740 SYNMO15061 1565 aa10.33□□□□□ -0.76
LTBP1-211ENST00000489740 KDM5DQ9BY66 1539 aa10.33□□□□□ -0.76
LTBP1-211ENST00000489740 WASHC2CQ9Y4E1 1318 aa10.33□□□□□ -0.76
LTBP1-211ENST00000489740 KIF3BO15066 747 aa10.32□□□□□ -0.76
LTBP1-211ENST00000489740 PLCG2P16885 1265 aa10.32□□□□□ -0.76
LTBP1-211ENST00000489740 STRCP1A6NGW2 1772 aa10.31□□□□□ -0.76
LTBP1-211ENST00000489740 POTEAQ6S8J7 498 aa10.3□□□□□ -0.76
LTBP1-211ENST00000489740 MBD5Q9P267 1494 aa10.3□□□□□ -0.76
LTBP1-211ENST00000489740 ZNF644Q9H582 1327 aaPredicted RBP10.29□□□□□ -0.76
LTBP1-211ENST00000489740 FAM135BQ49AJ0 1406 aa10.28□□□□□ -0.76
LTBP1-211ENST00000489740 PCDHB13Q9Y5F0 798 aa10.28□□□□□ -0.76
LTBP1-211ENST00000489740 RASEFQ8IZ41 740 aa10.27□□□□□ -0.77
LTBP1-211ENST00000489740 MTUS2Q5JR59 1369 aa10.26□□□□□ -0.77
LTBP1-211ENST00000489740 ZC3H13Q5T200 1668 aaKnown RBP10.25□□□□□ -0.77
LTBP1-211ENST00000489740 RSPH4AQ5TD94 716 aa10.25□□□□□ -0.77
LTBP1-211ENST00000489740 TIAM1Q13009 1591 aa10.24□□□□□ -0.77
LTBP1-211ENST00000489740 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.24□□□□□ -0.77
LTBP1-211ENST00000489740 XIRP1Q702N8 1843 aaKnown RBP10.23□□□□□ -0.77
LTBP1-211ENST00000489740 CCDC141Q6ZP82 1450 aa10.23□□□□□ -0.77
LTBP1-211ENST00000489740 SCAF11Q99590 1463 aaKnown RBP10.23□□□□□ -0.77
LTBP1-211ENST00000489740 PROM2Q8N271 834 aa10.23□□□□□ -0.77
LTBP1-211ENST00000489740 TXNDC2Q86VQ3 553 aa10.22□□□□□ -0.77
LTBP1-211ENST00000489740 MARVELD3Q96A59 401 aa10.22□□□□□ -0.77
LTBP1-211ENST00000489740 TMEM106CQ9BVX2 250 aa10.22□□□□□ -0.77
LTBP1-211ENST00000489740 UBR1Q8IWV7 1749 aa10.21□□□□□ -0.77
LTBP1-211ENST00000489740 LTKP29376 864 aa10.21□□□□□ -0.77
LTBP1-211ENST00000489740 IRX5P78411 483 aaPredicted RBP10.21□□□□□ -0.77
LTBP1-211ENST00000489740 MIER1Q8N108 512 aa10.21□□□□□ -0.77
LTBP1-211ENST00000489740 ERVK-7P63135 1459 aa10.21□□□□□ -0.78
LTBP1-211ENST00000489740 ABCC3O15438 1527 aa10.21□□□□□ -0.78
LTBP1-211ENST00000489740 SETD1AO15047 1707 aaKnown RBP10.2□□□□□ -0.78
LTBP1-211ENST00000489740 SLIT1O75093 1534 aa10.2□□□□□ -0.78
LTBP1-211ENST00000489740 TSPY4P0CV99 314 aa10.2□□□□□ -0.78
LTBP1-211ENST00000489740 TSPY10P0CW01 314 aa10.2□□□□□ -0.78
LTBP1-211ENST00000489740 CEP162Q5TB80 1403 aa10.2□□□□□ -0.78
LTBP1-211ENST00000489740 ARHGAP23Q9P227 1491 aa10.2□□□□□ -0.78
LTBP1-211ENST00000489740 EID1Q9Y6B2 187 aa10.2□□□□□ -0.78
LTBP1-211ENST00000489740 ROBO1Q9Y6N7 1651 aa10.19□□□□□ -0.78
LTBP1-211ENST00000489740 EHBP1L1Q8N3D4 1523 aa10.19□□□□□ -0.78
LTBP1-211ENST00000489740 NCOA2Q15596 1464 aa10.19□□□□□ -0.78
LTBP1-211ENST00000489740 TMEM94Q12767 1356 aa10.19□□□□□ -0.78
LTBP1-211ENST00000489740 OCEL1Q9H607 264 aa10.19□□□□□ -0.78
LTBP1-211ENST00000489740 LRRC9Q6ZRR7 1453 aa10.18□□□□□ -0.78
LTBP1-211ENST00000489740 UPF1Q92900 1129 aaKnown RBP eCLIP10.18□□□□□ -0.78
LTBP1-211ENST00000489740 CAMSAP2Q08AD1 1489 aa10.17□□□□□ -0.78
LTBP1-211ENST00000489740 JCADQ9P266 1359 aa10.17□□□□□ -0.78
LTBP1-211ENST00000489740 KCNA6P17658 529 aa10.17□□□□□ -0.78
LTBP1-211ENST00000489740 EMP3P54852 163 aa10.17□□□□□ -0.78
LTBP1-211ENST00000489740 IFNL1Q8IU54 200 aa10.17□□□□□ -0.78
LTBP1-211ENST00000489740 ARHGEF5Q12774 1597 aa10.17□□□□□ -0.78
LTBP1-211ENST00000489740 PROSER2Q86WR7 435 aaPredicted RBP10.16□□□□□ -0.78
LTBP1-211ENST00000489740 CFAP65Q6ZU64 1925 aaKnown RBP10.15□□□□□ -0.78
LTBP1-211ENST00000489740 EIF2AK4Q9P2K8 1649 aaKnown RBP10.15□□□□□ -0.78
LTBP1-211ENST00000489740 ZNF772Q68DY9 489 aaPredicted RBP10.15□□□□□ -0.78
LTBP1-211ENST00000489740 SLAIN2Q9P270 581 aa10.15□□□□□ -0.78
LTBP1-211ENST00000489740 ZBTB47Q9UFB7 747 aaPredicted RBP10.15□□□□□ -0.78
LTBP1-211ENST00000489740 TMEM2Q9UHN6 1383 aa10.14□□□□□ -0.79
LTBP1-211ENST00000489740 MAP3K1Q13233 1512 aa10.14□□□□□ -0.79
LTBP1-211ENST00000489740 PHLPP1O60346 1717 aa10.14□□□□□ -0.79
LTBP1-211ENST00000489740 ARHGAP31Q2M1Z3 1444 aa10.14□□□□□ -0.79
LTBP1-211ENST00000489740 MSH6P52701 1360 aa10.14□□□□□ -0.79
LTBP1-211ENST00000489740 PRDM15P57071 1507 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms