RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-218	ENST00000487565	ATP10B	O94823	1461 aa		11.92	□□□□□ -0.5
GARNL3-218	ENST00000487565	MAP3K9	P80192	1104 aa		11.91	□□□□□ -0.5
GARNL3-218	ENST00000487565	PSD	A5PKW4	1024 aa	Predicted RBP	11.9	□□□□□ -0.5
GARNL3-218	ENST00000487565	EMILIN3	Q9NT22	766 aa		11.9	□□□□□ -0.5
GARNL3-218	ENST00000487565	MTUS2	Q5JR59	1369 aa		11.9	□□□□□ -0.5
GARNL3-218	ENST00000487565	LRRC9	Q6ZRR7	1453 aa		11.89	□□□□□ -0.51
GARNL3-218	ENST00000487565	TRO	Q12816	1431 aa	Predicted RBP	11.88	□□□□□ -0.51
GARNL3-218	ENST00000487565	MAGI3	Q5TCQ9	1506 aa		11.88	□□□□□ -0.51
GARNL3-218	ENST00000487565	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.88	□□□□□ -0.51
GARNL3-218	ENST00000487565	WDR7	Q9Y4E6	1490 aa		11.88	□□□□□ -0.51
GARNL3-218	ENST00000487565	KIF14	Q15058	1648 aa		11.87	□□□□□ -0.51
GARNL3-218	ENST00000487565	EVI5	O60447	810 aa		11.87	□□□□□ -0.51
GARNL3-218	ENST00000487565	WDR70	Q9NW82	654 aa		11.87	□□□□□ -0.51
GARNL3-218	ENST00000487565	MAPKBP1	O60336	1514 aa		11.86	□□□□□ -0.51
GARNL3-218	ENST00000487565	CAMK2B	Q13554	666 aa		11.86	□□□□□ -0.51
GARNL3-218	ENST00000487565	SPNS2	Q8IVW8	549 aa		11.86	□□□□□ -0.51
GARNL3-218	ENST00000487565	TSHZ2	Q9NRE2	1034 aa		11.86	□□□□□ -0.51
GARNL3-218	ENST00000487565	ASXL2	Q76L83	1435 aa		11.86	□□□□□ -0.51
GARNL3-218	ENST00000487565	PPP4R3B	Q5MIZ7	849 aa		11.85	□□□□□ -0.51
GARNL3-218	ENST00000487565	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.84	□□□□□ -0.51
GARNL3-218	ENST00000487565	PLEKHD1	A6NEE1	506 aa		11.83	□□□□□ -0.52
GARNL3-218	ENST00000487565	PBX2	P40425	430 aa		11.83	□□□□□ -0.52
GARNL3-218	ENST00000487565	KANK4	Q5T7N3	995 aa	Predicted RBP	11.82	□□□□□ -0.52
GARNL3-218	ENST00000487565	ZNF454	Q8N9F8	522 aa		11.82	□□□□□ -0.52
GARNL3-218	ENST00000487565	AXIN2	Q9Y2T1	843 aa		11.82	□□□□□ -0.52
GARNL3-218	ENST00000487565	NCOA2	Q15596	1464 aa		11.82	□□□□□ -0.52
GARNL3-218	ENST00000487565	DPYSL4	O14531	572 aa		11.81	□□□□□ -0.52
GARNL3-218	ENST00000487565	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.81	□□□□□ -0.52
GARNL3-218	ENST00000487565	POTEE	Q6S8J3	1075 aa		11.8	□□□□□ -0.52
GARNL3-218	ENST00000487565	ANKRD13D	Q6ZTN6	518 aa		11.8	□□□□□ -0.52
GARNL3-218	ENST00000487565	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.8	□□□□□ -0.52
GARNL3-218	ENST00000487565	TTC37	Q6PGP7	1564 aa		11.79	□□□□□ -0.52
GARNL3-218	ENST00000487565	LSM11	P83369	360 aa	Known RBP eCLIP	11.79	□□□□□ -0.52
GARNL3-218	ENST00000487565	PLCB2	Q00722	1185 aa		11.79	□□□□□ -0.52
GARNL3-218	ENST00000487565	E2F4	Q16254	413 aa		11.79	□□□□□ -0.52
GARNL3-218	ENST00000487565	FOSB	P53539	338 aa		11.78	□□□□□ -0.52
GARNL3-218	ENST00000487565	ITSN2	Q9NZM3	1697 aa		11.78	□□□□□ -0.52
GARNL3-218	ENST00000487565	ABCC10	Q5T3U5	1492 aa		11.77	□□□□□ -0.52
GARNL3-218	ENST00000487565	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.77	□□□□□ -0.52
GARNL3-218	ENST00000487565	DIP2B	Q9P265	1576 aa		11.77	□□□□□ -0.53
GARNL3-218	ENST00000487565	ARHGAP33	O14559	1287 aa		11.77	□□□□□ -0.53
GARNL3-218	ENST00000487565	MMRN1	Q13201	1228 aa		11.77	□□□□□ -0.53
GARNL3-218	ENST00000487565	ABCA9	Q8IUA7	1624 aa		11.77	□□□□□ -0.53
GARNL3-218	ENST00000487565	CCNB3	Q8WWL7	1395 aa		11.77	□□□□□ -0.53
GARNL3-218	ENST00000487565	PHLDB1	Q86UU1	1377 aa		11.76	□□□□□ -0.53
GARNL3-218	ENST00000487565	MYOM3	Q5VTT5	1437 aa		11.76	□□□□□ -0.53
GARNL3-218	ENST00000487565	PREX2	Q70Z35	1606 aa		11.75	□□□□□ -0.53
GARNL3-218	ENST00000487565	KCNH8	Q96L42	1107 aa		11.75	□□□□□ -0.53
GARNL3-218	ENST00000487565	GLI2	P10070	1586 aa		11.75	□□□□□ -0.53
GARNL3-218	ENST00000487565	PSEN2	P49810	448 aa		11.74	□□□□□ -0.53
GARNL3-218	ENST00000487565	MYO5C	Q9NQX4	1742 aa		11.74	□□□□□ -0.53
GARNL3-218	ENST00000487565	KCNK17	Q96T54	332 aa		11.73	□□□□□ -0.53
GARNL3-218	ENST00000487565	ARHGAP5	Q13017	1502 aa		11.72	□□□□□ -0.53
GARNL3-218	ENST00000487565	ARAP3	Q8WWN8	1544 aa		11.72	□□□□□ -0.53
GARNL3-218	ENST00000487565	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.72	□□□□□ -0.53
GARNL3-218	ENST00000487565	FGD6	Q6ZV73	1430 aa		11.72	□□□□□ -0.53
GARNL3-218	ENST00000487565	ZDHHC16	Q969W1	377 aa		11.72	□□□□□ -0.53
GARNL3-218	ENST00000487565	CDC42BPA	Q5VT25	1732 aa		11.72	□□□□□ -0.53
GARNL3-218	ENST00000487565	BCL2L12	Q9HB09	334 aa		11.71	□□□□□ -0.53
GARNL3-218	ENST00000487565	MAP3K4	Q9Y6R4	1608 aa		11.71	□□□□□ -0.54
GARNL3-218	ENST00000487565	MIA2	Q96PC5	1412 aa		11.7	□□□□□ -0.54
GARNL3-218	ENST00000487565	CFAP74	Q9C0B2	1584 aa		11.7	□□□□□ -0.54
GARNL3-218	ENST00000487565	RRBP1	Q9P2E9	1410 aa	Known RBP	11.69	□□□□□ -0.54
GARNL3-218	ENST00000487565	DMRTA1	Q5VZB9	504 aa		11.69	□□□□□ -0.54
GARNL3-218	ENST00000487565	PCDHGA10	Q9Y5H3	936 aa		11.69	□□□□□ -0.54
GARNL3-218	ENST00000487565	CAMSAP2	Q08AD1	1489 aa		11.69	□□□□□ -0.54
GARNL3-218	ENST00000487565	PLCH2	O75038	1416 aa		11.69	□□□□□ -0.54
GARNL3-218	ENST00000487565	CD109	Q6YHK3	1445 aa		11.69	□□□□□ -0.54
GARNL3-218	ENST00000487565	PTPN23	Q9H3S7	1636 aa		11.68	□□□□□ -0.54
GARNL3-218	ENST00000487565	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.68	□□□□□ -0.54
GARNL3-218	ENST00000487565	PHF14	O94880	888 aa		11.68	□□□□□ -0.54
GARNL3-218	ENST00000487565	PTPRE	P23469	700 aa		11.68	□□□□□ -0.54
GARNL3-218	ENST00000487565	FAM69C	Q0P6D2	419 aa		11.68	□□□□□ -0.54
GARNL3-218	ENST00000487565	PDIA6	Q15084	440 aa		11.68	□□□□□ -0.54
GARNL3-218	ENST00000487565	ADAM33	Q9BZ11	813 aa		11.68	□□□□□ -0.54
GARNL3-218	ENST00000487565	PTGER2	P43116	358 aa		11.67	□□□□□ -0.54
GARNL3-218	ENST00000487565	TYW1B	Q6NUM6	668 aa		11.67	□□□□□ -0.54
GARNL3-218	ENST00000487565	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.67	□□□□□ -0.54
GARNL3-218	ENST00000487565	FANCA	O15360	1455 aa		11.67	□□□□□ -0.54
GARNL3-218	ENST00000487565	TCOF1	Q13428	1488 aa	Known RBP	11.67	□□□□□ -0.54
GARNL3-218	ENST00000487565	KIF13A	Q9H1H9	1805 aa		11.67	□□□□□ -0.54
GARNL3-218	ENST00000487565	PLEKHH2	Q8IVE3	1493 aa		11.66	□□□□□ -0.54
GARNL3-218	ENST00000487565	ADGRD1	Q6QNK2	874 aa		11.66	□□□□□ -0.54
GARNL3-218	ENST00000487565	DDX12P	Q92771	950 aa		11.66	□□□□□ -0.54
GARNL3-218	ENST00000487565	MYT1L	Q9UL68	1186 aa		11.66	□□□□□ -0.54
GARNL3-218	ENST00000487565	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.66	□□□□□ -0.54
GARNL3-218	ENST00000487565	SAMD9L	Q8IVG5	1584 aa		11.66	□□□□□ -0.54
GARNL3-218	ENST00000487565	CDC42BPB	Q9Y5S2	1711 aa		11.66	□□□□□ -0.54
GARNL3-218	ENST00000487565	TEX14	Q8IWB6	1497 aa		11.65	□□□□□ -0.54
GARNL3-218	ENST00000487565	HAP1	P54257	671 aa	Predicted RBP	11.65	□□□□□ -0.54
GARNL3-218	ENST00000487565	FBXW7	Q969H0	707 aa		11.65	□□□□□ -0.54
GARNL3-218	ENST00000487565	ABCC1	P33527	1531 aa		11.65	□□□□□ -0.55
GARNL3-218	ENST00000487565	TK2	O00142	265 aa		11.64	□□□□□ -0.55
GARNL3-218	ENST00000487565	EPAS1	Q99814	870 aa		11.64	□□□□□ -0.55
GARNL3-218	ENST00000487565	SYCP2	Q9BX26	1530 aa		11.64	□□□□□ -0.55
GARNL3-218	ENST00000487565	NEO1	Q92859	1461 aa		11.63	□□□□□ -0.55
GARNL3-218	ENST00000487565	FAM50A	Q14320	339 aa	Known RBP	11.63	□□□□□ -0.55
GARNL3-218	ENST00000487565	EFCAB2	Q5VUJ9	269 aa		11.63	□□□□□ -0.55
GARNL3-218	ENST00000487565	RNF166	Q96A37	237 aa	Predicted RBP	11.63	□□□□□ -0.55
GARNL3-218	ENST00000487565	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.63	□□□□□ -0.55

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