RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 PDAP1Q13442 181 aaKnown RBP10.39□□□□□ -0.75
TMC1-204ENST00000486417 DIEXFQ68CQ4 756 aaKnown RBP10.39□□□□□ -0.75
TMC1-204ENST00000486417 CHRDL2Q6WN34 429 aa10.39□□□□□ -0.75
TMC1-204ENST00000486417 MAP3K4Q9Y6R4 1608 aa10.39□□□□□ -0.75
TMC1-204ENST00000486417 RTEL1-TNFRSF6BF6WH68 1400 aa10.39□□□□□ -0.75
TMC1-204ENST00000486417 IFNL1Q8IU54 200 aa10.38□□□□□ -0.75
TMC1-204ENST00000486417 DEPDC5O75140 1603 aa10.38□□□□□ -0.75
TMC1-204ENST00000486417 EIF2AK4Q9P2K8 1649 aaKnown RBP10.38□□□□□ -0.75
TMC1-204ENST00000486417 PPP1R15AO75807 674 aaPredicted RBP10.38□□□□□ -0.75
TMC1-204ENST00000486417 PSEN1P49768 467 aa10.38□□□□□ -0.75
TMC1-204ENST00000486417 MAP3K13O43283 966 aa10.37□□□□□ -0.75
TMC1-204ENST00000486417 KIDINS220Q9ULH0 1771 aa10.37□□□□□ -0.75
TMC1-204ENST00000486417 NUP155O75694 1391 aa10.37□□□□□ -0.75
TMC1-204ENST00000486417 GLI2P10070 1586 aa10.36□□□□□ -0.75
TMC1-204ENST00000486417 KDM5CP41229 1560 aa10.36□□□□□ -0.75
TMC1-204ENST00000486417 ZNF579Q8NAF0 562 aaKnown RBP10.36□□□□□ -0.75
TMC1-204ENST00000486417 MFRPQ9BY79 579 aa10.36□□□□□ -0.75
TMC1-204ENST00000486417 CD109Q6YHK3 1445 aa10.35□□□□□ -0.75
TMC1-204ENST00000486417 SCAPERQ9BY12 1400 aa10.35□□□□□ -0.75
TMC1-204ENST00000486417 NBR1Q14596 966 aa10.34□□□□□ -0.75
TMC1-204ENST00000486417 ZNF518AQ6AHZ1 1483 aa10.34□□□□□ -0.75
TMC1-204ENST00000486417 DIP2BQ9P265 1576 aa10.34□□□□□ -0.75
TMC1-204ENST00000486417 HECW2Q9P2P5 1572 aa10.34□□□□□ -0.75
TMC1-204ENST00000486417 SPAG9O60271 1321 aaKnown RBP10.34□□□□□ -0.75
TMC1-204ENST00000486417 TULP1O00294 542 aaPredicted RBP10.33□□□□□ -0.76
TMC1-204ENST00000486417 KIF12Q96FN5 646 aa10.33□□□□□ -0.76
TMC1-204ENST00000486417 POGZQ7Z3K3 1410 aa10.33□□□□□ -0.76
TMC1-204ENST00000486417 NEO1Q92859 1461 aa10.33□□□□□ -0.76
TMC1-204ENST00000486417 RICTORQ6R327 1708 aa10.32□□□□□ -0.76
TMC1-204ENST00000486417 MROH1Q8NDA8 1641 aa10.32□□□□□ -0.76
TMC1-204ENST00000486417 PRDM15P57071 1507 aaPredicted RBP10.32□□□□□ -0.76
TMC1-204ENST00000486417 PPP1R37O75864 691 aa10.32□□□□□ -0.76
TMC1-204ENST00000486417 E9PCH4 1651 aa10.32□□□□□ -0.76
TMC1-204ENST00000486417 ABCA6Q8N139 1617 aa10.31□□□□□ -0.76
TMC1-204ENST00000486417 TET3O43151 1660 aa10.31□□□□□ -0.76
TMC1-204ENST00000486417 AFAP1Q8N556 730 aa10.31□□□□□ -0.76
TMC1-204ENST00000486417 RYDENQ9NUL5 291 aaKnown RBP10.31□□□□□ -0.76
TMC1-204ENST00000486417 VWDEQ8N2E2 1590 aa10.31□□□□□ -0.76
TMC1-204ENST00000486417 RNF17Q9BXT8 1623 aaKnown RBP10.31□□□□□ -0.76
TMC1-204ENST00000486417 PPRC1Q5VV67 1664 aaKnown RBP10.3□□□□□ -0.76
TMC1-204ENST00000486417 BCORL1Q5H9F3 1711 aa10.3□□□□□ -0.76
TMC1-204ENST00000486417 CYB5RLQ6IPT4 315 aa10.3□□□□□ -0.76
TMC1-204ENST00000486417 SPHKAPQ2M3C7 1700 aa10.3□□□□□ -0.76
TMC1-204ENST00000486417 EFCAB3Q8N7B9 438 aa10.29□□□□□ -0.76
TMC1-204ENST00000486417 PHF12Q96QT6 1004 aa10.29□□□□□ -0.76
TMC1-204ENST00000486417 FRMPD1Q5SYB0 1578 aa10.29□□□□□ -0.76
TMC1-204ENST00000486417 MLH3Q9UHC1 1453 aa10.28□□□□□ -0.76
TMC1-204ENST00000486417 L3MBTL2Q969R5 705 aa10.28□□□□□ -0.76
TMC1-204ENST00000486417 ARXQ96QS3 562 aa10.28□□□□□ -0.76
TMC1-204ENST00000486417 ATP10AO60312 1499 aa10.28□□□□□ -0.76
TMC1-204ENST00000486417 CABP2Q9NPB3 220 aa10.28□□□□□ -0.76
TMC1-204ENST00000486417 CEP152O94986 1710 aa10.27□□□□□ -0.77
TMC1-204ENST00000486417 POLR1AO95602 1720 aaPredicted RBP10.27□□□□□ -0.77
TMC1-204ENST00000486417 KIF13AQ9H1H9 1805 aa10.27□□□□□ -0.77
TMC1-204ENST00000486417 DIP2CQ9Y2E4 1556 aa10.27□□□□□ -0.77
TMC1-204ENST00000486417 PAK3O75914 559 aaPredicted RBP10.27□□□□□ -0.77
TMC1-204ENST00000486417 ZRANB1Q9UGI0 708 aa10.27□□□□□ -0.77
TMC1-204ENST00000486417 DHX29Q7Z478 1369 aaKnown RBP10.26□□□□□ -0.77
TMC1-204ENST00000486417 A2MP01023 1474 aa10.26□□□□□ -0.77
TMC1-204ENST00000486417 PLA2R1Q13018 1463 aa10.26□□□□□ -0.77
TMC1-204ENST00000486417 TRPM2O94759 1503 aa10.26□□□□□ -0.77
TMC1-204ENST00000486417 FBXO22Q8NEZ5 403 aa10.26□□□□□ -0.77
TMC1-204ENST00000486417 PHF8Q9UPP1 1060 aa10.26□□□□□ -0.77
TMC1-204ENST00000486417 GTF3C3Q9Y5Q9 886 aa10.26□□□□□ -0.77
TMC1-204ENST00000486417 TSPOAP1O95153 1857 aa10.26□□□□□ -0.77
TMC1-204ENST00000486417 CCDC144AA2RUR9 1427 aa10.25□□□□□ -0.77
TMC1-204ENST00000486417 ZMYM4Q5VZL5 1548 aa10.25□□□□□ -0.77
TMC1-204ENST00000486417 CD44P16070 742 aaKnown RBP10.24□□□□□ -0.77
TMC1-204ENST00000486417 TRPC6Q9Y210 931 aa10.24□□□□□ -0.77
TMC1-204ENST00000486417 UHRF1BP1Q6BDS2 1440 aa10.24□□□□□ -0.77
TMC1-204ENST00000486417 EFCAB6Q5THR3 1501 aa10.24□□□□□ -0.77
TMC1-204ENST00000486417 LMTK2Q8IWU2 1503 aa10.24□□□□□ -0.77
TMC1-204ENST00000486417 RALGAPBQ86X10 1494 aa10.23□□□□□ -0.77
TMC1-204ENST00000486417 KCNV2Q8TDN2 545 aa10.23□□□□□ -0.77
TMC1-204ENST00000486417 CLTCL1P53675 1640 aa10.23□□□□□ -0.77
TMC1-204ENST00000486417 TRPM1Q7Z4N2 1603 aa10.23□□□□□ -0.77
TMC1-204ENST00000486417 KANK1Q14678 1352 aa10.23□□□□□ -0.77
TMC1-204ENST00000486417 NBPF8Q3BBV2 869 aa10.23□□□□□ -0.77
TMC1-204ENST00000486417 ERICH6Q7L0X2 663 aa10.22□□□□□ -0.77
TMC1-204ENST00000486417 MYT1LQ9UL68 1186 aa10.22□□□□□ -0.77
TMC1-204ENST00000486417 ZC3H13Q5T200 1668 aaKnown RBP10.21□□□□□ -0.77
TMC1-204ENST00000486417 PTPRTO14522 1441 aa10.2□□□□□ -0.78
TMC1-204ENST00000486417 CAMSAP1Q5T5Y3 1602 aa10.2□□□□□ -0.78
TMC1-204ENST00000486417 HIRIP3Q9BW71 556 aaPredicted RBP10.2□□□□□ -0.78
TMC1-204ENST00000486417 LAMC1P11047 1609 aa10.19□□□□□ -0.78
TMC1-204ENST00000486417 NEURL4Q96JN8 1562 aa10.19□□□□□ -0.78
TMC1-204ENST00000486417 KIF3BO15066 747 aa10.19□□□□□ -0.78
TMC1-204ENST00000486417 HSPA5P11021 654 aaKnown RBP10.19□□□□□ -0.78
TMC1-204ENST00000486417 FAM69CQ0P6D2 419 aa10.18□□□□□ -0.78
TMC1-204ENST00000486417 MS4A4AQ96JQ5 239 aa10.18□□□□□ -0.78
TMC1-204ENST00000486417 MROH2AA6NES4 1674 aa10.18□□□□□ -0.78
TMC1-204ENST00000486417 SPATA31E1Q6ZUB1 1445 aa10.18□□□□□ -0.78
TMC1-204ENST00000486417 KIF1BO60333 1816 aa10.18□□□□□ -0.78
TMC1-204ENST00000486417 IFT172Q9UG01 1749 aa10.18□□□□□ -0.78
TMC1-204ENST00000486417 ABCC3O15438 1527 aa10.18□□□□□ -0.78
TMC1-204ENST00000486417 RAPGEF3O95398 923 aa10.17□□□□□ -0.78
TMC1-204ENST00000486417 EIF4G2P78344 907 aaKnown RBP eCLIP10.17□□□□□ -0.78
TMC1-204ENST00000486417 MADDQ8WXG6 1647 aa10.17□□□□□ -0.78
TMC1-204ENST00000486417 PRAG1Q86YV5 1406 aa10.17□□□□□ -0.78
TMC1-204ENST00000486417 REREQ9P2R6 1566 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms