RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 TMEM134Q9H6X4 195 aa12.13□□□□□ -0.47
COMMD3-213ENST00000483684 RBM46Q8TBY0 533 aaKnown RBP12.12□□□□□ -0.47
COMMD3-213ENST00000483684 PCDHB3Q9Y5E6 796 aa12.12□□□□□ -0.47
COMMD3-213ENST00000483684 BLOC1S3Q6QNY0 202 aa12.1□□□□□ -0.47
COMMD3-213ENST00000483684 RCCD1A6NED2 376 aa12.08□□□□□ -0.48
COMMD3-213ENST00000483684 NUTM2FA1L443 756 aa12.06□□□□□ -0.48
COMMD3-213ENST00000483684 ACTN4O43707 911 aaKnown RBP12.06□□□□□ -0.48
COMMD3-213ENST00000483684 FAM161AQ3B820 660 aa12.06□□□□□ -0.48
COMMD3-213ENST00000483684 EMID1Q96A84 441 aaPredicted RBP12.06□□□□□ -0.48
COMMD3-213ENST00000483684 PDZRN3Q9UPQ7 1066 aa12.06□□□□□ -0.48
COMMD3-213ENST00000483684 RNF223E7ERA6 249 aa12.05□□□□□ -0.48
COMMD3-213ENST00000483684 P3H3Q8IVL6 736 aa12.04□□□□□ -0.48
COMMD3-213ENST00000483684 SEMA3EO15041 775 aa12.03□□□□□ -0.48
COMMD3-213ENST00000483684 TLL1O43897 1013 aa12.03□□□□□ -0.48
COMMD3-213ENST00000483684 FCHSD2O94868 740 aa12.03□□□□□ -0.48
COMMD3-213ENST00000483684 KMT5BQ4FZB7 885 aa12.03□□□□□ -0.48
COMMD3-213ENST00000483684 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.02□□□□□ -0.49
COMMD3-213ENST00000483684 SLC10A3P09131 477 aa12.02□□□□□ -0.49
COMMD3-213ENST00000483684 CFHP08603 1231 aa12.01□□□□□ -0.49
COMMD3-213ENST00000483684 TRIM67Q6ZTA4 783 aa12.01□□□□□ -0.49
COMMD3-213ENST00000483684 SLC19A1P41440 591 aa11.99□□□□□ -0.49
COMMD3-213ENST00000483684 ANKLE1Q8NAG6 615 aa11.99□□□□□ -0.49
COMMD3-213ENST00000483684 PXYLP1Q8TE99 480 aa11.99□□□□□ -0.49
COMMD3-213ENST00000483684 SPRYD7Q5W111 196 aa11.97□□□□□ -0.49
COMMD3-213ENST00000483684 S1PR4O95977 384 aa11.96□□□□□ -0.49
COMMD3-213ENST00000483684 OATP04181 439 aa11.96□□□□□ -0.49
COMMD3-213ENST00000483684 PPEF1O14829 653 aaPredicted RBP11.95□□□□□ -0.5
COMMD3-213ENST00000483684 ADH1BP00325 375 aa11.95□□□□□ -0.5
COMMD3-213ENST00000483684 HIC1Q14526 733 aa11.94□□□□□ -0.5
COMMD3-213ENST00000483684 ZNF598Q86UK7 904 aaKnown RBP11.94□□□□□ -0.5
COMMD3-213ENST00000483684 LIAT1Q6ZQX7 453 aa11.93□□□□□ -0.5
COMMD3-213ENST00000483684 METTL3Q86U44 580 aaKnown RBP11.93□□□□□ -0.5
COMMD3-213ENST00000483684 TESPA1A2RU30 521 aaPredicted RBP11.92□□□□□ -0.5
COMMD3-213ENST00000483684 NR1I2O75469 434 aa11.92□□□□□ -0.5
COMMD3-213ENST00000483684 PRR20EP86478 221 aa11.92□□□□□ -0.5
COMMD3-213ENST00000483684 PRR20CP86479 221 aa11.92□□□□□ -0.5
COMMD3-213ENST00000483684 PRR20DP86480 221 aa11.92□□□□□ -0.5
COMMD3-213ENST00000483684 PRR20BP86481 221 aa11.92□□□□□ -0.5
COMMD3-213ENST00000483684 PRR20AP86496 221 aa11.92□□□□□ -0.5
COMMD3-213ENST00000483684 RBM26Q5T8P6 1007 aaKnown RBP11.9□□□□□ -0.5
COMMD3-213ENST00000483684 ZNF787Q6DD87 383 aa11.9□□□□□ -0.5
COMMD3-213ENST00000483684 SCUBE3Q8IX30 993 aa11.9□□□□□ -0.5
COMMD3-213ENST00000483684 GPR37O15354 613 aa11.88□□□□□ -0.51
COMMD3-213ENST00000483684 FECHP22830 423 aa11.88□□□□□ -0.51
COMMD3-213ENST00000483684 SLC6A16Q9GZN6 736 aa11.88□□□□□ -0.51
COMMD3-213ENST00000483684 GDF9O60383 454 aa11.87□□□□□ -0.51
COMMD3-213ENST00000483684 PLA2G2CQ5R387 149 aa11.87□□□□□ -0.51
COMMD3-213ENST00000483684 GNPATO15228 680 aa11.86□□□□□ -0.51
COMMD3-213ENST00000483684 DGAT1O75907 488 aa11.86□□□□□ -0.51
COMMD3-213ENST00000483684 PUS10Q3MIT2 529 aaKnown RBP11.86□□□□□ -0.51
COMMD3-213ENST00000483684 ZNF697Q5TEC3 545 aa11.86□□□□□ -0.51
COMMD3-213ENST00000483684 MYT1Q01538 1121 aa11.85□□□□□ -0.51
COMMD3-213ENST00000483684 RSPH4AQ5TD94 716 aa11.85□□□□□ -0.51
COMMD3-213ENST00000483684 ZNF775Q96BV0 537 aaPredicted RBP11.85□□□□□ -0.51
COMMD3-213ENST00000483684 SMYD5Q6GMV2 418 aa11.84□□□□□ -0.51
COMMD3-213ENST00000483684 DAXXQ9UER7 740 aaPredicted RBP11.84□□□□□ -0.51
COMMD3-213ENST00000483684 PKDCCQ504Y2 493 aa11.83□□□□□ -0.52
COMMD3-213ENST00000483684 SPSB2Q99619 263 aa11.83□□□□□ -0.52
COMMD3-213ENST00000483684 MORN1Q5T089 497 aa11.81□□□□□ -0.52
COMMD3-213ENST00000483684 THAP11Q96EK4 314 aa11.8□□□□□ -0.52
COMMD3-213ENST00000483684 TNFRSF10AO00220 468 aa11.79□□□□□ -0.52
COMMD3-213ENST00000483684 PLCB2Q00722 1185 aa11.79□□□□□ -0.52
COMMD3-213ENST00000483684 FUT2Q10981 343 aa11.77□□□□□ -0.53
COMMD3-213ENST00000483684 RDH13Q8NBN7 331 aa11.77□□□□□ -0.53
COMMD3-213ENST00000483684 PHOX2BQ99453 314 aa11.77□□□□□ -0.53
COMMD3-213ENST00000483684 DDX11L8A8MPP1 907 aa11.76□□□□□ -0.53
COMMD3-213ENST00000483684 PKD2L1Q9P0L9 805 aa11.76□□□□□ -0.53
COMMD3-213ENST00000483684 FAM187AA6NFU0 413 aa11.75□□□□□ -0.53
COMMD3-213ENST00000483684 ATP6V1AP38606 617 aa11.75□□□□□ -0.53
COMMD3-213ENST00000483684 GCGRP47871 477 aa11.75□□□□□ -0.53
COMMD3-213ENST00000483684 NLRP7Q8WX94 980 aa11.75□□□□□ -0.53
COMMD3-213ENST00000483684 RPIAP49247 311 aa11.74□□□□□ -0.53
COMMD3-213ENST00000483684 LMOD2Q6P5Q4 547 aa11.74□□□□□ -0.53
COMMD3-213ENST00000483684 FAM160A2Q8N612 972 aaPredicted RBP11.74□□□□□ -0.53
COMMD3-213ENST00000483684 POTECB2RU33 542 aa11.73□□□□□ -0.53
COMMD3-213ENST00000483684 SLC27A5Q9Y2P5 690 aa11.73□□□□□ -0.53
COMMD3-213ENST00000483684 SALL2Q9Y467 1007 aaPredicted RBP11.73□□□□□ -0.53
COMMD3-213ENST00000483684 SULF1Q8IWU6 871 aa11.72□□□□□ -0.53
COMMD3-213ENST00000483684 FMNL1O95466 1100 aaPredicted RBP11.71□□□□□ -0.53
COMMD3-213ENST00000483684 FCF1Q9Y324 198 aaKnown RBP11.71□□□□□ -0.53
COMMD3-213ENST00000483684 AAASQ9NRG9 546 aa11.7□□□□□ -0.54
COMMD3-213ENST00000483684 BRICD5Q6PL45 260 aa11.69□□□□□ -0.54
COMMD3-213ENST00000483684 FOXC1Q12948 553 aa11.67□□□□□ -0.54
COMMD3-213ENST00000483684 MSS51Q4VC12 460 aa11.67□□□□□ -0.54
COMMD3-213ENST00000483684 GPIHBP1Q8IV16 184 aa11.67□□□□□ -0.54
COMMD3-213ENST00000483684 PRDM9Q9NQV7 894 aa11.67□□□□□ -0.54
COMMD3-213ENST00000483684 TOR4AQ9NXH8 423 aa11.67□□□□□ -0.54
COMMD3-213ENST00000483684 ST8SIA5O15466 376 aa11.66□□□□□ -0.54
COMMD3-213ENST00000483684 CRIPAKQ8N1N5 446 aa11.66□□□□□ -0.54
COMMD3-213ENST00000483684 CD2BP2O95400 341 aaKnown RBP11.65□□□□□ -0.54
COMMD3-213ENST00000483684 RNF19BQ6ZMZ0 732 aa11.65□□□□□ -0.54
COMMD3-213ENST00000483684 AVPP01185 164 aa11.64□□□□□ -0.55
COMMD3-213ENST00000483684 CD46P15529 392 aa11.62□□□□□ -0.55
COMMD3-213ENST00000483684 GRIPAP1Q4V328 841 aa11.61□□□□□ -0.55
COMMD3-213ENST00000483684 KDM2AQ9Y2K7 1162 aa11.59□□□□□ -0.55
COMMD3-213ENST00000483684 MMP16P51512 607 aa11.58□□□□□ -0.56
COMMD3-213ENST00000483684 MAP2K5Q13163 448 aa11.58□□□□□ -0.56
COMMD3-213ENST00000483684 CYP4X1Q8N118 509 aa11.58□□□□□ -0.56
COMMD3-213ENST00000483684 DACH1Q9UI36 760 aa11.58□□□□□ -0.56
COMMD3-213ENST00000483684 LCE2AQ5TA79 106 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms