RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 SMC4Q9NTJ3 1288 aa15.2■□□□□ 0.02
SGSM3-209ENST00000478085 PBRM1Q86U86 1689 aa15.2■□□□□ 0.02
SGSM3-209ENST00000478085 CALD1Q05682 793 aaKnown RBP15.19■□□□□ 0.02
SGSM3-209ENST00000478085 ZBED9Q6R2W3 1325 aa15.19■□□□□ 0.02
SGSM3-209ENST00000478085 CDK19Q9BWU1 502 aa15.19■□□□□ 0.02
SGSM3-209ENST00000478085 RPGRIP1LQ68CZ1 1315 aa15.18■□□□□ 0.02
SGSM3-209ENST00000478085 HMOX1P09601 288 aa15.18■□□□□ 0.02
SGSM3-209ENST00000478085 WAPLQ7Z5K2 1190 aa15.18■□□□□ 0.02
SGSM3-209ENST00000478085 RBM19Q9Y4C8 960 aaKnown RBP15.18■□□□□ 0.02
SGSM3-209ENST00000478085 IPO8O15397 1037 aaKnown RBP15.18■□□□□ 0.02
SGSM3-209ENST00000478085 WDR7Q9Y4E6 1490 aa15.17■□□□□ 0.02
SGSM3-209ENST00000478085 SYCP2Q9BX26 1530 aa15.17■□□□□ 0.02
SGSM3-209ENST00000478085 NLRP6P59044 892 aa15.17■□□□□ 0.02
SGSM3-209ENST00000478085 ITPRIPQ8IWB1 547 aa15.17■□□□□ 0.02
SGSM3-209ENST00000478085 CEP170Q5SW79 1584 aa15.17■□□□□ 0.02
SGSM3-209ENST00000478085 APBB1O00213 710 aa15.16■□□□□ 0.02
SGSM3-209ENST00000478085 PPP2R1AP30153 589 aa15.16■□□□□ 0.02
SGSM3-209ENST00000478085 RPRD2Q5VT52 1461 aaKnown RBP15.16■□□□□ 0.02
SGSM3-209ENST00000478085 NBR1Q14596 966 aa15.16■□□□□ 0.02
SGSM3-209ENST00000478085 ZNF330Q9Y3S2 320 aaPredicted RBP15.15■□□□□ 0.02
SGSM3-209ENST00000478085 CCDC9Q9Y3X0 531 aaKnown RBP15.15■□□□□ 0.02
SGSM3-209ENST00000478085 PROSER2Q86WR7 435 aaPredicted RBP15.15■□□□□ 0.02
SGSM3-209ENST00000478085 CHMP4BQ9H444 224 aaKnown RBP15.15■□□□□ 0.02
SGSM3-209ENST00000478085 RIPK4P57078 832 aa15.14■□□□□ 0.01
SGSM3-209ENST00000478085 ANKLE2Q86XL3 938 aa15.13■□□□□ 0.01
SGSM3-209ENST00000478085 ATF3P18847 181 aa15.13■□□□□ 0.01
SGSM3-209ENST00000478085 TCERG1O14776 1098 aaKnown RBP15.13■□□□□ 0.01
SGSM3-209ENST00000478085 OS9Q13438 667 aaPredicted RBP15.13■□□□□ 0.01
SGSM3-209ENST00000478085 ESCO1Q5FWF5 840 aa15.13■□□□□ 0.01
SGSM3-209ENST00000478085 ABCC2Q92887 1545 aa15.13■□□□□ 0.01
SGSM3-209ENST00000478085 POGZQ7Z3K3 1410 aa15.12■□□□□ 0.01
SGSM3-209ENST00000478085 RBM33Q96EV2 1170 aaKnown RBP15.12■□□□□ 0.01
SGSM3-209ENST00000478085 LMOD3Q0VAK6 560 aa15.12■□□□□ 0.01
SGSM3-209ENST00000478085 SLC4A10Q6U841 1118 aa15.12■□□□□ 0.01
SGSM3-209ENST00000478085 CDCA7LQ96GN5 454 aa15.12■□□□□ 0.01
SGSM3-209ENST00000478085 STK31Q9BXU1 1019 aa15.11■□□□□ 0.01
SGSM3-209ENST00000478085 E9PSI1 815 aa15.11■□□□□ 0.01
SGSM3-209ENST00000478085 ABTB2Q8N961 1025 aa15.1■□□□□ 0.01
SGSM3-209ENST00000478085 RUNDC1Q96C34 613 aa15.1■□□□□ 0.01
SGSM3-209ENST00000478085 MAPKBP1O60336 1514 aa15.1■□□□□ 0.01
SGSM3-209ENST00000478085 PNISRQ8TF01 805 aaKnown RBP15.1■□□□□ 0.01
SGSM3-209ENST00000478085 TCOF1Q13428 1488 aaKnown RBP15.1■□□□□ 0.01
SGSM3-209ENST00000478085 BRD4O60885 1362 aaPredicted RBP15.09■□□□□ 0.01
SGSM3-209ENST00000478085 KDM5BQ9UGL1 1544 aa15.09■□□□□ 0.01
SGSM3-209ENST00000478085 ERICH6BQ5W0A0 696 aa15.09■□□□□ 0.01
SGSM3-209ENST00000478085 SAMD9Q5K651 1589 aa15.09■□□□□ 0.01
SGSM3-209ENST00000478085 TCP11L2Q8N4U5 519 aa15.09■□□□□ 0.01
SGSM3-209ENST00000478085 EXOC6Q8TAG9 804 aa15.09■□□□□ 0.01
SGSM3-209ENST00000478085 MAGI3Q5TCQ9 1506 aa15.08■□□□□ 0
SGSM3-209ENST00000478085 A2MP01023 1474 aa15.07■□□□□ 0
SGSM3-209ENST00000478085 NOS1P29475 1434 aa15.07■□□□□ 0
SGSM3-209ENST00000478085 NPHP1O15259 732 aa15.07■□□□□ 0
SGSM3-209ENST00000478085 RTEL1-TNFRSF6BF6WH68 1400 aa15.06■□□□□ 0
SGSM3-209ENST00000478085 CFAP43Q8NDM7 1665 aa15.06■□□□□ 0
SGSM3-209ENST00000478085 COG6Q9Y2V7 657 aa15.06■□□□□ 0
SGSM3-209ENST00000478085 CCDC61Q9Y6R9 512 aa15.06■□□□□ 0
SGSM3-209ENST00000478085 EVA1CP58658 441 aa15.06■□□□□ 0
SGSM3-209ENST00000478085 RRP1P56182 461 aaKnown RBP15.05■□□□□ 0
SGSM3-209ENST00000478085 NUDT16Q96DE0 195 aaKnown RBP15.05■□□□□ -0
SGSM3-209ENST00000478085 ZNF518AQ6AHZ1 1483 aa15.05■□□□□ -0
SGSM3-209ENST00000478085 TEFQ10587 303 aa15.05■□□□□ -0
SGSM3-209ENST00000478085 RWDD1Q9H446 243 aaPredicted RBP15.05■□□□□ -0
SGSM3-209ENST00000478085 NECTIN2Q92692 538 aa15.04■□□□□ -0
SGSM3-209ENST00000478085 C14orf93Q9H972 538 aaKnown RBP15.04■□□□□ -0
SGSM3-209ENST00000478085 XPCQ01831 940 aaPredicted RBP15.03■□□□□ -0
SGSM3-209ENST00000478085 CRBNQ96SW2 442 aa15.03■□□□□ -0
SGSM3-209ENST00000478085 PRKAR2BP31323 418 aa15.03■□□□□ -0
SGSM3-209ENST00000478085 C1orf141Q5JVX7 400 aa15.03■□□□□ -0
SGSM3-209ENST00000478085 ITSN2Q9NZM3 1697 aa15.03■□□□□ -0
SGSM3-209ENST00000478085 ZNF692Q9BU19 519 aaPredicted RBP15.02■□□□□ -0
SGSM3-209ENST00000478085 AMOTL2Q9Y2J4 779 aa15.02■□□□□ -0
SGSM3-209ENST00000478085 DUOX2Q9NRD8 1548 aa15.02□□□□□ -0.01
SGSM3-209ENST00000478085 RRS1Q15050 365 aaKnown RBP15.02□□□□□ -0.01
SGSM3-209ENST00000478085 BECN1Q14457 450 aa15.02□□□□□ -0.01
SGSM3-209ENST00000478085 NLRP2Q9NX02 1062 aa15.01□□□□□ -0.01
SGSM3-209ENST00000478085 PPP6R1Q9UPN7 881 aa15.01□□□□□ -0.01
SGSM3-209ENST00000478085 EIF2S2P20042 333 aaKnown RBP15.01□□□□□ -0.01
SGSM3-209ENST00000478085 CASC1Q6TDU7 716 aa15.01□□□□□ -0.01
SGSM3-209ENST00000478085 DDRGK1Q96HY6 314 aa15□□□□□ -0.01
SGSM3-209ENST00000478085 ZKSCAN2Q63HK3 967 aa15□□□□□ -0.01
SGSM3-209ENST00000478085 GPRASP1Q5JY77 1395 aa14.99□□□□□ -0.01
SGSM3-209ENST00000478085 FAM135AQ9P2D6 1515 aa14.99□□□□□ -0.01
SGSM3-209ENST00000478085 NGEFQ8N5V2 710 aa14.99□□□□□ -0.01
SGSM3-209ENST00000478085 ABCC10Q5T3U5 1492 aa14.99□□□□□ -0.01
SGSM3-209ENST00000478085 ATAD2Q6PL18 1390 aa14.98□□□□□ -0.01
SGSM3-209ENST00000478085 SULT6B1Q6IMI4 303 aa14.98□□□□□ -0.01
SGSM3-209ENST00000478085 NSD3Q9BZ95 1437 aa14.98□□□□□ -0.01
SGSM3-209ENST00000478085 USP35Q9P2H5 1018 aa14.98□□□□□ -0.01
SGSM3-209ENST00000478085 DISP3Q9P2K9 1392 aa14.97□□□□□ -0.01
SGSM3-209ENST00000478085 CHMP4AQ9BY43 222 aa14.97□□□□□ -0.01
SGSM3-209ENST00000478085 RAPGEF4Q8WZA2 1011 aa14.96□□□□□ -0.01
SGSM3-209ENST00000478085 TEX14Q8IWB6 1497 aa14.95□□□□□ -0.02
SGSM3-209ENST00000478085 NME9Q86XW9 330 aa14.95□□□□□ -0.02
SGSM3-209ENST00000478085 PZPP20742 1482 aa14.95□□□□□ -0.02
SGSM3-209ENST00000478085 WASLO00401 505 aaPredicted RBP14.95□□□□□ -0.02
SGSM3-209ENST00000478085 TSPYL4Q9UJ04 414 aa14.95□□□□□ -0.02
SGSM3-209ENST00000478085 TSR2Q969E8 191 aaKnown RBP14.94□□□□□ -0.02
SGSM3-209ENST00000478085 AEBP2Q6ZN18 517 aaPredicted RBP14.94□□□□□ -0.02
SGSM3-209ENST00000478085 FOXO3O43524 673 aa14.94□□□□□ -0.02
SGSM3-209ENST00000478085 GNAI1P63096 354 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms