RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 CERKQ8TCT0 537 aa9.61□□□□□ -0.87
UBR4-212ENST00000475973 PLA2R1Q13018 1463 aa9.6□□□□□ -0.87
UBR4-212ENST00000475973 ANKRD30BQ9BXX2 1392 aa9.6□□□□□ -0.87
UBR4-212ENST00000475973 RPRD2Q5VT52 1461 aaKnown RBP9.59□□□□□ -0.87
UBR4-212ENST00000475973 CLTCQ00610 1675 aaKnown RBP9.59□□□□□ -0.87
UBR4-212ENST00000475973 ANP32CO43423 234 aa9.59□□□□□ -0.87
UBR4-212ENST00000475973 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.59□□□□□ -0.87
UBR4-212ENST00000475973 CIZ1Q9ULV3 898 aaPredicted RBP9.59□□□□□ -0.87
UBR4-212ENST00000475973 MYO3AQ8NEV4 1616 aa9.59□□□□□ -0.87
UBR4-212ENST00000475973 PZPP20742 1482 aa9.59□□□□□ -0.87
UBR4-212ENST00000475973 CEP170BQ9Y4F5 1589 aaPredicted RBP9.58□□□□□ -0.88
UBR4-212ENST00000475973 WASHC2AQ641Q2 1341 aa9.58□□□□□ -0.88
UBR4-212ENST00000475973 WASHC2CQ9Y4E1 1318 aa9.58□□□□□ -0.88
UBR4-212ENST00000475973 CAMSAP1Q5T5Y3 1602 aa9.58□□□□□ -0.88
UBR4-212ENST00000475973 TNRQ92752 1358 aa9.58□□□□□ -0.88
UBR4-212ENST00000475973 MAST1Q9Y2H9 1570 aa9.58□□□□□ -0.88
UBR4-212ENST00000475973 DNMT1P26358 1616 aaKnown RBP9.57□□□□□ -0.88
UBR4-212ENST00000475973 A2ML1A8K2U0 1454 aa9.57□□□□□ -0.88
UBR4-212ENST00000475973 SHANK2Q9UPX8 1470 aa9.57□□□□□ -0.88
UBR4-212ENST00000475973 ABCC5O15440 1437 aa9.56□□□□□ -0.88
UBR4-212ENST00000475973 ZNF142P52746 1687 aaPredicted RBP9.56□□□□□ -0.88
UBR4-212ENST00000475973 ADGRL2O95490 1459 aa9.56□□□□□ -0.88
UBR4-212ENST00000475973 VSIG10Q8N0Z9 540 aa9.56□□□□□ -0.88
UBR4-212ENST00000475973 KIF15Q9NS87 1388 aa9.55□□□□□ -0.88
UBR4-212ENST00000475973 AKT1S1Q96B36 256 aa9.55□□□□□ -0.88
UBR4-212ENST00000475973 RBM42Q9BTD8 480 aaKnown RBP9.55□□□□□ -0.88
UBR4-212ENST00000475973 ANP32EQ9BTT0 268 aa9.55□□□□□ -0.88
UBR4-212ENST00000475973 DUOX2Q9NRD8 1548 aa9.55□□□□□ -0.88
UBR4-212ENST00000475973 DAPK1P53355 1430 aa9.55□□□□□ -0.88
UBR4-212ENST00000475973 NLRP1Q9C000 1473 aa9.54□□□□□ -0.88
UBR4-212ENST00000475973 POLR1AO95602 1720 aaPredicted RBP9.54□□□□□ -0.88
UBR4-212ENST00000475973 EIF2AK4Q9P2K8 1649 aaKnown RBP9.54□□□□□ -0.88
UBR4-212ENST00000475973 SPDYE1Q8NFV5 336 aaPredicted RBP9.54□□□□□ -0.88
UBR4-212ENST00000475973 MPHOSPH9Q99550 1183 aa9.54□□□□□ -0.88
UBR4-212ENST00000475973 STRCQ7RTU9 1775 aa9.54□□□□□ -0.88
UBR4-212ENST00000475973 ERBINQ96RT1 1412 aa9.54□□□□□ -0.88
UBR4-212ENST00000475973 SETD1BQ9UPS6 1966 aaKnown RBP9.54□□□□□ -0.88
UBR4-212ENST00000475973 IQSEC2Q5JU85 1478 aa9.53□□□□□ -0.88
UBR4-212ENST00000475973 RNF17Q9BXT8 1623 aaKnown RBP9.53□□□□□ -0.88
UBR4-212ENST00000475973 ABCC3O15438 1527 aa9.53□□□□□ -0.88
UBR4-212ENST00000475973 HSPA5P11021 654 aaKnown RBP9.53□□□□□ -0.88
UBR4-212ENST00000475973 NCKAP5LQ9HCH0 1330 aa9.53□□□□□ -0.88
UBR4-212ENST00000475973 CCDC7Q96M83 1385 aa9.52□□□□□ -0.88
UBR4-212ENST00000475973 ZC3H13Q5T200 1668 aaKnown RBP9.52□□□□□ -0.89
UBR4-212ENST00000475973 FBXO31Q5XUX0 539 aaPredicted RBP9.52□□□□□ -0.89
UBR4-212ENST00000475973 PAXIP1Q6ZW49 1069 aaPredicted RBP9.52□□□□□ -0.89
UBR4-212ENST00000475973 KANK1Q14678 1352 aa9.51□□□□□ -0.89
UBR4-212ENST00000475973 ANKRD30AQ9BXX3 1397 aa9.51□□□□□ -0.89
UBR4-212ENST00000475973 UGGT1Q9NYU2 1555 aa9.5□□□□□ -0.89
UBR4-212ENST00000475973 LTBP4Q8N2S1 1624 aa9.5□□□□□ -0.89
UBR4-212ENST00000475973 NUBP1P53384 320 aa9.5□□□□□ -0.89
UBR4-212ENST00000475973 EIF4G2P78344 907 aaKnown RBP eCLIP9.5□□□□□ -0.89
UBR4-212ENST00000475973 GSE1Q14687 1217 aa9.5□□□□□ -0.89
UBR4-212ENST00000475973 THEMISQ8N1K5 641 aaPredicted RBP9.5□□□□□ -0.89
UBR4-212ENST00000475973 L3MBTL2Q969R5 705 aa9.5□□□□□ -0.89
UBR4-212ENST00000475973 RRP7BPQ9NSQ0 103 aa9.5□□□□□ -0.89
UBR4-212ENST00000475973 ERVK-7P63135 1459 aa9.5□□□□□ -0.89
UBR4-212ENST00000475973 PRDM15P57071 1507 aaPredicted RBP9.5□□□□□ -0.89
UBR4-212ENST00000475973 RNF123Q5XPI4 1314 aa9.5□□□□□ -0.89
UBR4-212ENST00000475973 ZNF335Q9H4Z2 1342 aaPredicted RBP9.5□□□□□ -0.89
UBR4-212ENST00000475973 SPATA31D1Q6ZQQ2 1576 aa9.5□□□□□ -0.89
UBR4-212ENST00000475973 C11orf95C9JLR9 678 aaPredicted RBP9.49□□□□□ -0.89
UBR4-212ENST00000475973 ANKLE2Q86XL3 938 aa9.49□□□□□ -0.89
UBR4-212ENST00000475973 CFAP44Q96MT7 982 aa9.49□□□□□ -0.89
UBR4-212ENST00000475973 PRKRIP1Q9H875 184 aaPredicted RBP9.49□□□□□ -0.89
UBR4-212ENST00000475973 RBM19Q9Y4C8 960 aaKnown RBP9.49□□□□□ -0.89
UBR4-212ENST00000475973 NBPF8Q3BBV2 869 aa9.48□□□□□ -0.89
UBR4-212ENST00000475973 HIRIP3Q9BW71 556 aaPredicted RBP9.48□□□□□ -0.89
UBR4-212ENST00000475973 FANCIQ9NVI1 1328 aa9.48□□□□□ -0.89
UBR4-212ENST00000475973 MROH1Q8NDA8 1641 aa9.48□□□□□ -0.89
UBR4-212ENST00000475973 CROCC2H7BZ55 1655 aa9.48□□□□□ -0.89
UBR4-212ENST00000475973 ARHGAP31Q2M1Z3 1444 aa9.48□□□□□ -0.89
UBR4-212ENST00000475973 CHGAP10645 457 aaKnown RBP9.47□□□□□ -0.89
UBR4-212ENST00000475973 SPRYD3Q8NCJ5 442 aa9.47□□□□□ -0.89
UBR4-212ENST00000475973 ZBED9Q6R2W3 1325 aa9.47□□□□□ -0.89
UBR4-212ENST00000475973 NPHP4O75161 1426 aaPredicted RBP9.47□□□□□ -0.89
UBR4-212ENST00000475973 PRR29P0C7W0 189 aa9.46□□□□□ -0.9
UBR4-212ENST00000475973 REM2Q8IYK8 340 aaPredicted RBP9.46□□□□□ -0.9
UBR4-212ENST00000475973 TRIM52Q96A61 297 aa9.46□□□□□ -0.9
UBR4-212ENST00000475973 CREBZFQ9NS37 354 aa9.46□□□□□ -0.9
UBR4-212ENST00000475973 CHIC2Q9UKJ5 165 aa9.46□□□□□ -0.9
UBR4-212ENST00000475973 CLEC11AQ9Y240 323 aa9.46□□□□□ -0.9
UBR4-212ENST00000475973 CPS1P31327 1500 aa9.46□□□□□ -0.9
UBR4-212ENST00000475973 NEFLP07196 543 aa9.45□□□□□ -0.9
UBR4-212ENST00000475973 NEURL4Q96JN8 1562 aa9.45□□□□□ -0.9
UBR4-212ENST00000475973 UBAP1LF5GYI3 381 aa9.44□□□□□ -0.9
UBR4-212ENST00000475973 MNX1P50219 401 aaPredicted RBP9.44□□□□□ -0.9
UBR4-212ENST00000475973 KDM2AQ9Y2K7 1162 aa9.44□□□□□ -0.9
UBR4-212ENST00000475973 MED14O60244 1454 aa9.44□□□□□ -0.9
UBR4-212ENST00000475973 LMTK2Q8IWU2 1503 aa9.44□□□□□ -0.9
UBR4-212ENST00000475973 DEPDC5O75140 1603 aa9.43□□□□□ -0.9
UBR4-212ENST00000475973 SCAF11Q99590 1463 aaKnown RBP9.43□□□□□ -0.9
UBR4-212ENST00000475973 ANKRD50Q9ULJ7 1429 aa9.43□□□□□ -0.9
UBR4-212ENST00000475973 KIF7Q2M1P5 1343 aa9.43□□□□□ -0.9
UBR4-212ENST00000475973 CCDC184Q52MB2 194 aa9.43□□□□□ -0.9
UBR4-212ENST00000475973 BCANQ96GW7 911 aa9.43□□□□□ -0.9
UBR4-212ENST00000475973 RALGAPBQ86X10 1494 aa9.42□□□□□ -0.9
UBR4-212ENST00000475973 DCAF8Q5TAQ9 597 aa9.42□□□□□ -0.9
UBR4-212ENST00000475973 RNF25Q96BH1 459 aaPredicted RBP9.42□□□□□ -0.9
UBR4-212ENST00000475973 EID1Q9Y6B2 187 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms