RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 CEP152O94986 1710 aa16.53■□□□□ 0.24
CALD1-217ENST00000475772 MYOM3Q5VTT5 1437 aa16.53■□□□□ 0.24
CALD1-217ENST00000475772 EIF2AK4Q9P2K8 1649 aaKnown RBP16.52■□□□□ 0.24
CALD1-217ENST00000475772 ERVK-7P63135 1459 aa16.52■□□□□ 0.23
CALD1-217ENST00000475772 ZC3H13Q5T200 1668 aaKnown RBP16.52■□□□□ 0.23
CALD1-217ENST00000475772 IQGAP1P46940 1657 aa16.5■□□□□ 0.23
CALD1-217ENST00000475772 PIP4P2Q8N4L2 257 aa16.5■□□□□ 0.23
CALD1-217ENST00000475772 UBR1Q8IWV7 1749 aa16.48■□□□□ 0.23
CALD1-217ENST00000475772 ABCC5O15440 1437 aa16.48■□□□□ 0.23
CALD1-217ENST00000475772 LTKP29376 864 aa16.48■□□□□ 0.23
CALD1-217ENST00000475772 DUOX2Q9NRD8 1548 aa16.48■□□□□ 0.23
CALD1-217ENST00000475772 LRRC7Q96NW7 1537 aa16.46■□□□□ 0.23
CALD1-217ENST00000475772 RRP7BPQ9NSQ0 103 aa16.46■□□□□ 0.23
CALD1-217ENST00000475772 ARHGAP31Q2M1Z3 1444 aa16.45■□□□□ 0.22
CALD1-217ENST00000475772 ARHGAP23Q9P227 1491 aa16.44■□□□□ 0.22
CALD1-217ENST00000475772 KIF15Q9NS87 1388 aa16.44■□□□□ 0.22
CALD1-217ENST00000475772 CROCC2H7BZ55 1655 aa16.43■□□□□ 0.22
CALD1-217ENST00000475772 MED1Q15648 1581 aaPredicted RBP16.43■□□□□ 0.22
CALD1-217ENST00000475772 PTPN23Q9H3S7 1636 aa16.43■□□□□ 0.22
CALD1-217ENST00000475772 SLIT1O75093 1534 aa16.42■□□□□ 0.22
CALD1-217ENST00000475772 PRDM15P57071 1507 aaPredicted RBP16.42■□□□□ 0.22
CALD1-217ENST00000475772 TXNDC2Q86VQ3 553 aa16.42■□□□□ 0.22
CALD1-217ENST00000475772 CREBZFQ9NS37 354 aa16.42■□□□□ 0.22
CALD1-217ENST00000475772 XIRP1Q702N8 1843 aaKnown RBP16.41■□□□□ 0.22
CALD1-217ENST00000475772 ERBINQ96RT1 1412 aa16.41■□□□□ 0.22
CALD1-217ENST00000475772 SCAF11Q99590 1463 aaKnown RBP16.41■□□□□ 0.22
CALD1-217ENST00000475772 DAPK1P53355 1430 aa16.4■□□□□ 0.22
CALD1-217ENST00000475772 PRKAR2AP13861 404 aaKnown RBP16.39■□□□□ 0.21
CALD1-217ENST00000475772 VASPP50552 380 aaPredicted RBP16.39■□□□□ 0.21
CALD1-217ENST00000475772 IDI1Q13907 227 aa16.39■□□□□ 0.21
CALD1-217ENST00000475772 CHADLQ6NUI6 762 aa16.39■□□□□ 0.21
CALD1-217ENST00000475772 CHIC2Q9UKJ5 165 aa16.39■□□□□ 0.21
CALD1-217ENST00000475772 PIK3C2BO00750 1634 aa16.38■□□□□ 0.21
CALD1-217ENST00000475772 SYNMO15061 1565 aa16.37■□□□□ 0.21
CALD1-217ENST00000475772 FGD6Q6ZV73 1430 aa16.36■□□□□ 0.21
CALD1-217ENST00000475772 MIER1Q8N108 512 aa16.36■□□□□ 0.21
CALD1-217ENST00000475772 TMEM2Q9UHN6 1383 aa16.36■□□□□ 0.21
CALD1-217ENST00000475772 LMTK2Q8IWU2 1503 aa16.35■□□□□ 0.21
CALD1-217ENST00000475772 EID1Q9Y6B2 187 aa16.34■□□□□ 0.21
CALD1-217ENST00000475772 TET3O43151 1660 aa16.32■□□□□ 0.2
CALD1-217ENST00000475772 NOS1P29475 1434 aa16.32■□□□□ 0.2
CALD1-217ENST00000475772 ANKRD30AQ9BXX3 1397 aa16.32■□□□□ 0.2
CALD1-217ENST00000475772 KDM5AP29375 1690 aaKnown RBP16.31■□□□□ 0.2
CALD1-217ENST00000475772 KANK1Q14678 1352 aa16.31■□□□□ 0.2
CALD1-217ENST00000475772 PLCD3Q8N3E9 789 aa16.31■□□□□ 0.2
CALD1-217ENST00000475772 RGS17Q9UGC6 210 aaPredicted RBP16.3■□□□□ 0.2
CALD1-217ENST00000475772 EFCAB6Q5THR3 1501 aa16.29■□□□□ 0.2
CALD1-217ENST00000475772 KCNA6P17658 529 aa16.29■□□□□ 0.2
CALD1-217ENST00000475772 POTEHQ6S545 545 aa16.29■□□□□ 0.2
CALD1-217ENST00000475772 SLC26A8Q96RN1 970 aa16.29■□□□□ 0.2
CALD1-217ENST00000475772 ADGRL2O95490 1459 aa16.29■□□□□ 0.2
CALD1-217ENST00000475772 RBM33Q96EV2 1170 aaKnown RBP16.28■□□□□ 0.2
CALD1-217ENST00000475772 MNX1P50219 401 aaPredicted RBP16.27■□□□□ 0.2
CALD1-217ENST00000475772 FAM135BQ49AJ0 1406 aa16.27■□□□□ 0.19
CALD1-217ENST00000475772 TMEM94Q12767 1356 aa16.26■□□□□ 0.19
CALD1-217ENST00000475772 MYO5BQ9ULV0 1848 aa16.26■□□□□ 0.19
CALD1-217ENST00000475772 SLC52A1Q9NWF4 448 aa16.25■□□□□ 0.19
CALD1-217ENST00000475772 PLEKHG5O94827 1062 aa16.24■□□□□ 0.19
CALD1-217ENST00000475772 PROSER2Q86WR7 435 aaPredicted RBP16.24■□□□□ 0.19
CALD1-217ENST00000475772 FAM50AQ14320 339 aaKnown RBP16.23■□□□□ 0.19
CALD1-217ENST00000475772 FARP1Q9Y4F1 1045 aaPredicted RBP16.23■□□□□ 0.19
CALD1-217ENST00000475772 ADGRB3O60242 1522 aa16.23■□□□□ 0.19
CALD1-217ENST00000475772 ANKRD50Q9ULJ7 1429 aa16.22■□□□□ 0.19
CALD1-217ENST00000475772 ZFYVE9O95405 1425 aa16.2■□□□□ 0.18
CALD1-217ENST00000475772 CHD2O14647 1828 aaKnown RBP16.2■□□□□ 0.18
CALD1-217ENST00000475772 IFNLR1Q8IU57 520 aaPredicted RBP16.2■□□□□ 0.18
CALD1-217ENST00000475772 NWD1Q149M9 1564 aa16.2■□□□□ 0.18
CALD1-217ENST00000475772 ROBO1Q9Y6N7 1651 aa16.19■□□□□ 0.18
CALD1-217ENST00000475772 RPRD2Q5VT52 1461 aaKnown RBP16.19■□□□□ 0.18
CALD1-217ENST00000475772 TMEM131LA2VDJ0 1609 aa16.18■□□□□ 0.18
CALD1-217ENST00000475772 POTEAQ6S8J7 498 aa16.17■□□□□ 0.18
CALD1-217ENST00000475772 GCC2Q8IWJ2 1684 aa16.17■□□□□ 0.18
CALD1-217ENST00000475772 PLEKHG1Q9ULL1 1385 aa16.16■□□□□ 0.18
CALD1-217ENST00000475772 BCANQ96GW7 911 aa16.16■□□□□ 0.18
CALD1-217ENST00000475772 RIMS2Q9UQ26 1411 aa16.16■□□□□ 0.18
CALD1-217ENST00000475772 NKTRP30414 1462 aaKnown RBP16.16■□□□□ 0.18
CALD1-217ENST00000475772 SLAIN2Q9P270 581 aa16.15■□□□□ 0.18
CALD1-217ENST00000475772 TBX22Q9Y458 520 aa16.15■□□□□ 0.18
CALD1-217ENST00000475772 E9PCH4 1651 aa16.14■□□□□ 0.18
CALD1-217ENST00000475772 ZBTB47Q9UFB7 747 aaPredicted RBP16.14■□□□□ 0.17
CALD1-217ENST00000475772 UNC13BO14795 1591 aa16.13■□□□□ 0.17
CALD1-217ENST00000475772 NUTM2DQ5VT03 806 aaPredicted RBP16.13■□□□□ 0.17
CALD1-217ENST00000475772 ADAMTS13Q76LX8 1427 aa16.12■□□□□ 0.17
CALD1-217ENST00000475772 MSH6P52701 1360 aa16.12■□□□□ 0.17
CALD1-217ENST00000475772 CHGAP10645 457 aaKnown RBP16.11■□□□□ 0.17
CALD1-217ENST00000475772 HDGFP51858 240 aaKnown RBP16.11■□□□□ 0.17
CALD1-217ENST00000475772 ROCK1Q13464 1354 aa16.1■□□□□ 0.17
CALD1-217ENST00000475772 PHLPP1O60346 1717 aa16.09■□□□□ 0.17
CALD1-217ENST00000475772 PPP1R15AO75807 674 aaPredicted RBP16.09■□□□□ 0.17
CALD1-217ENST00000475772 KLHL34Q8N239 644 aa16.09■□□□□ 0.17
CALD1-217ENST00000475772 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.08■□□□□ 0.16
CALD1-217ENST00000475772 NCOA3Q9Y6Q9 1424 aa16.08■□□□□ 0.16
CALD1-217ENST00000475772 IQGAP3Q86VI3 1631 aa16.08■□□□□ 0.16
CALD1-217ENST00000475772 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.06■□□□□ 0.16
CALD1-217ENST00000475772 PTPRUQ92729 1446 aa16.06■□□□□ 0.16
CALD1-217ENST00000475772 COL16A1Q07092 1604 aaPredicted RBP16.05■□□□□ 0.16
CALD1-217ENST00000475772 NUP155O75694 1391 aa16.05■□□□□ 0.16
CALD1-217ENST00000475772 JCADQ9P266 1359 aa16.05■□□□□ 0.16
CALD1-217ENST00000475772 C19orf44Q9H6X5 657 aa16.04■□□□□ 0.16
CALD1-217ENST00000475772 AMOTL2Q9Y2J4 779 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms