RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 MLH3Q9UHC1 1453 aa15.44■□□□□ 0.06
KCNIP3-206ENST00000475491 FRMPD1Q5SYB0 1578 aa15.44■□□□□ 0.06
KCNIP3-206ENST00000475491 CLTCL1P53675 1640 aa15.44■□□□□ 0.06
KCNIP3-206ENST00000475491 HECW2Q9P2P5 1572 aa15.44■□□□□ 0.06
KCNIP3-206ENST00000475491 RALGAPBQ86X10 1494 aa15.44■□□□□ 0.06
KCNIP3-206ENST00000475491 DIP2BQ9P265 1576 aa15.42■□□□□ 0.06
KCNIP3-206ENST00000475491 ARAP3Q8WWN8 1544 aa15.42■□□□□ 0.06
KCNIP3-206ENST00000475491 TXNDC2Q86VQ3 553 aa15.41■□□□□ 0.06
KCNIP3-206ENST00000475491 VGFO15240 615 aaPredicted RBP15.4■□□□□ 0.06
KCNIP3-206ENST00000475491 FBLN1P23142 703 aa15.4■□□□□ 0.06
KCNIP3-206ENST00000475491 PRAM1Q96QH2 718 aa15.4■□□□□ 0.06
KCNIP3-206ENST00000475491 SOX12O15370 315 aa15.4■□□□□ 0.06
KCNIP3-206ENST00000475491 UHRF1BP1Q6BDS2 1440 aa15.39■□□□□ 0.05
KCNIP3-206ENST00000475491 PPRC1Q5VV67 1664 aaKnown RBP15.39■□□□□ 0.05
KCNIP3-206ENST00000475491 NCKAP5LQ9HCH0 1330 aa15.39■□□□□ 0.05
KCNIP3-206ENST00000475491 TSHZ2Q9NRE2 1034 aa15.38■□□□□ 0.05
KCNIP3-206ENST00000475491 CENPJQ9HC77 1338 aaPredicted RBP15.38■□□□□ 0.05
KCNIP3-206ENST00000475491 DIP2CQ9Y2E4 1556 aa15.38■□□□□ 0.05
KCNIP3-206ENST00000475491 PPM1GO15355 546 aaPredicted RBP15.38■□□□□ 0.05
KCNIP3-206ENST00000475491 MROH1Q8NDA8 1641 aa15.37■□□□□ 0.05
KCNIP3-206ENST00000475491 CCDC146Q8IYE0 955 aa15.37■□□□□ 0.05
KCNIP3-206ENST00000475491 PTPRTO14522 1441 aa15.37■□□□□ 0.05
KCNIP3-206ENST00000475491 MAGI2Q86UL8 1455 aa15.37■□□□□ 0.05
KCNIP3-206ENST00000475491 NEUROD2Q15784 382 aa15.37■□□□□ 0.05
KCNIP3-206ENST00000475491 KDM5CP41229 1560 aa15.36■□□□□ 0.05
KCNIP3-206ENST00000475491 ABCC3O15438 1527 aa15.36■□□□□ 0.05
KCNIP3-206ENST00000475491 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.36■□□□□ 0.05
KCNIP3-206ENST00000475491 ANO8Q9HCE9 1232 aaPredicted RBP15.35■□□□□ 0.05
KCNIP3-206ENST00000475491 ZMYM3Q14202 1370 aa15.35■□□□□ 0.05
KCNIP3-206ENST00000475491 C14orf93Q9H972 538 aaKnown RBP15.34■□□□□ 0.05
KCNIP3-206ENST00000475491 SLC52A1Q9NWF4 448 aa15.34■□□□□ 0.05
KCNIP3-206ENST00000475491 TRPM2O94759 1503 aa15.33■□□□□ 0.05
KCNIP3-206ENST00000475491 EFCAB6Q5THR3 1501 aa15.33■□□□□ 0.05
KCNIP3-206ENST00000475491 MAP3K4Q9Y6R4 1608 aa15.33■□□□□ 0.04
KCNIP3-206ENST00000475491 CARD14Q9BXL6 1004 aa15.32■□□□□ 0.04
KCNIP3-206ENST00000475491 KTN1Q86UP2 1357 aaKnown RBP15.32■□□□□ 0.04
KCNIP3-206ENST00000475491 PER1O15534 1290 aaPredicted RBP15.32■□□□□ 0.04
KCNIP3-206ENST00000475491 SPHKAPQ2M3C7 1700 aa15.32■□□□□ 0.04
KCNIP3-206ENST00000475491 TET3O43151 1660 aa15.31■□□□□ 0.04
KCNIP3-206ENST00000475491 GGNBP2Q9H3C7 697 aa15.31■□□□□ 0.04
KCNIP3-206ENST00000475491 RNF17Q9BXT8 1623 aaKnown RBP15.3■□□□□ 0.04
KCNIP3-206ENST00000475491 RICTORQ6R327 1708 aa15.29■□□□□ 0.04
KCNIP3-206ENST00000475491 LTKP29376 864 aa15.28■□□□□ 0.04
KCNIP3-206ENST00000475491 B4GALNT3Q6L9W6 998 aa15.28■□□□□ 0.04
KCNIP3-206ENST00000475491 CFAP74Q9C0B2 1584 aa15.28■□□□□ 0.04
KCNIP3-206ENST00000475491 SCAF11Q99590 1463 aaKnown RBP15.27■□□□□ 0.04
KCNIP3-206ENST00000475491 PNISRQ8TF01 805 aaKnown RBP15.27■□□□□ 0.04
KCNIP3-206ENST00000475491 CDCA7LQ96GN5 454 aa15.27■□□□□ 0.04
KCNIP3-206ENST00000475491 RRP7AQ9Y3A4 280 aaKnown RBP15.27■□□□□ 0.04
KCNIP3-206ENST00000475491 TRPM1Q7Z4N2 1603 aa15.27■□□□□ 0.04
KCNIP3-206ENST00000475491 CABP1Q9NZU7 370 aa15.27■□□□□ 0.03
KCNIP3-206ENST00000475491 DNAJC5Q9H3Z4 198 aa15.27■□□□□ 0.03
KCNIP3-206ENST00000475491 MROH2AA6NES4 1674 aa15.26■□□□□ 0.03
KCNIP3-206ENST00000475491 MYBBP1AQ9BQG0 1328 aaKnown RBP15.26■□□□□ 0.03
KCNIP3-206ENST00000475491 MORC1Q86VD1 984 aa15.26■□□□□ 0.03
KCNIP3-206ENST00000475491 PLEKHH1Q9ULM0 1364 aa15.26■□□□□ 0.03
KCNIP3-206ENST00000475491 ADAMTS8Q9UP79 889 aa15.26■□□□□ 0.03
KCNIP3-206ENST00000475491 EIF3AQ14152 1382 aaKnown RBP15.26■□□□□ 0.03
KCNIP3-206ENST00000475491 GPRASP1Q5JY77 1395 aa15.26■□□□□ 0.03
KCNIP3-206ENST00000475491 CDCA8Q53HL2 280 aa15.25■□□□□ 0.03
KCNIP3-206ENST00000475491 SIGLEC1Q9BZZ2 1709 aa15.25■□□□□ 0.03
KCNIP3-206ENST00000475491 CDK19Q9BWU1 502 aa15.25■□□□□ 0.03
KCNIP3-206ENST00000475491 WDR43Q15061 677 aaKnown RBP eCLIP15.24■□□□□ 0.03
KCNIP3-206ENST00000475491 NLRP13Q86W25 1043 aa15.24■□□□□ 0.03
KCNIP3-206ENST00000475491 DEPDC5O75140 1603 aa15.24■□□□□ 0.03
KCNIP3-206ENST00000475491 PPP2R1AP30153 589 aa15.24■□□□□ 0.03
KCNIP3-206ENST00000475491 CCDC136Q96JN2 1154 aa15.23■□□□□ 0.03
KCNIP3-206ENST00000475491 ZRANB1Q9UGI0 708 aa15.23■□□□□ 0.03
KCNIP3-206ENST00000475491 VWDEQ8N2E2 1590 aa15.23■□□□□ 0.03
KCNIP3-206ENST00000475491 KIF13AQ9H1H9 1805 aa15.23■□□□□ 0.03
KCNIP3-206ENST00000475491 RALBP1Q15311 655 aa15.22■□□□□ 0.03
KCNIP3-206ENST00000475491 NUTM2GQ5VZR2 741 aa15.22■□□□□ 0.03
KCNIP3-206ENST00000475491 PMFBP1Q8TBY8 1022 aa15.22■□□□□ 0.03
KCNIP3-206ENST00000475491 AMER1Q5JTC6 1135 aaPredicted RBP15.22■□□□□ 0.03
KCNIP3-206ENST00000475491 SYNMO15061 1565 aa15.22■□□□□ 0.03
KCNIP3-206ENST00000475491 C14orf37Q86TY3 774 aa15.21■□□□□ 0.03
KCNIP3-206ENST00000475491 MADDQ8WXG6 1647 aa15.21■□□□□ 0.03
KCNIP3-206ENST00000475491 ZBTB7CA1YPR0 619 aa15.21■□□□□ 0.03
KCNIP3-206ENST00000475491 GLI2P10070 1586 aa15.21■□□□□ 0.03
KCNIP3-206ENST00000475491 KIF1BO60333 1816 aa15.21■□□□□ 0.02
KCNIP3-206ENST00000475491 EVC2Q86UK5 1308 aa15.21■□□□□ 0.02
KCNIP3-206ENST00000475491 U2SURPO15042 1029 aaKnown RBP15.21■□□□□ 0.02
KCNIP3-206ENST00000475491 TNRQ92752 1358 aa15.2■□□□□ 0.02
KCNIP3-206ENST00000475491 CLTCQ00610 1675 aaKnown RBP15.2■□□□□ 0.02
KCNIP3-206ENST00000475491 CAMSAP1Q5T5Y3 1602 aa15.2■□□□□ 0.02
KCNIP3-206ENST00000475491 RIMS2Q9UQ26 1411 aa15.2■□□□□ 0.02
KCNIP3-206ENST00000475491 METP08581 1390 aa15.19■□□□□ 0.02
KCNIP3-206ENST00000475491 RPGRIP1LQ68CZ1 1315 aa15.19■□□□□ 0.02
KCNIP3-206ENST00000475491 ERVK-7P63135 1459 aa15.19■□□□□ 0.02
KCNIP3-206ENST00000475491 NSD3Q9BZ95 1437 aa15.18■□□□□ 0.02
KCNIP3-206ENST00000475491 EID1Q9Y6B2 187 aa15.18■□□□□ 0.02
KCNIP3-206ENST00000475491 PIK3C2GO75747 1445 aa15.18■□□□□ 0.02
KCNIP3-206ENST00000475491 EIF2AK4Q9P2K8 1649 aaKnown RBP15.18■□□□□ 0.02
KCNIP3-206ENST00000475491 PLIN1O60240 522 aa15.18■□□□□ 0.02
KCNIP3-206ENST00000475491 MTHFSP49914 203 aa15.17■□□□□ 0.02
KCNIP3-206ENST00000475491 HSPA2P54652 639 aa15.16■□□□□ 0.02
KCNIP3-206ENST00000475491 APAF1O14727 1248 aa15.16■□□□□ 0.02
KCNIP3-206ENST00000475491 MYO5BQ9ULV0 1848 aa15.16■□□□□ 0.02
KCNIP3-206ENST00000475491 XPCQ01831 940 aaPredicted RBP15.14■□□□□ 0.01
KCNIP3-206ENST00000475491 LMOD2Q6P5Q4 547 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms