RNA–Protein interactions for RNA: ENST00000474311.1

NEPRO-215, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 2

Gene NEPRO, Length 1,671 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-215ENST00000474311 GIPC2Q8TF65 315 aa10.67□□□□□ -0.7
NEPRO-215ENST00000474311 PSMD1Q99460 953 aa10.67□□□□□ -0.7
NEPRO-215ENST00000474311 HIRIP3Q9BW71 556 aaPredicted RBP10.67□□□□□ -0.7
NEPRO-215ENST00000474311 ATG7O95352 703 aa10.66□□□□□ -0.7
NEPRO-215ENST00000474311 PRIM1P49642 420 aaKnown RBP10.66□□□□□ -0.7
NEPRO-215ENST00000474311 CDCA8Q53HL2 280 aa10.66□□□□□ -0.7
NEPRO-215ENST00000474311 PRM3Q9NNZ6 103 aa10.66□□□□□ -0.7
NEPRO-215ENST00000474311 FAM217BQ9NTX9 383 aaPredicted RBP10.66□□□□□ -0.7
NEPRO-215ENST00000474311 GIMAP6Q6P9H5 292 aa10.65□□□□□ -0.7
NEPRO-215ENST00000474311 SOCS7O14512 581 aa10.64□□□□□ -0.71
NEPRO-215ENST00000474311 TAF7LQ5H9L4 462 aa10.64□□□□□ -0.71
NEPRO-215ENST00000474311 CCER1Q8TC90 406 aaPredicted RBP10.64□□□□□ -0.71
NEPRO-215ENST00000474311 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.64□□□□□ -0.71
NEPRO-215ENST00000474311 LIMD1Q9UGP4 676 aa10.64□□□□□ -0.71
NEPRO-215ENST00000474311 CD44P16070 742 aaKnown RBP10.63□□□□□ -0.71
NEPRO-215ENST00000474311 NAALADL2Q58DX5 795 aa10.63□□□□□ -0.71
NEPRO-215ENST00000474311 CCDC61Q9Y6R9 512 aa10.63□□□□□ -0.71
NEPRO-215ENST00000474311 B4GALNT3Q6L9W6 998 aa10.62□□□□□ -0.71
NEPRO-215ENST00000474311 NOL8Q76FK4 1167 aaKnown RBP10.62□□□□□ -0.71
NEPRO-215ENST00000474311 TBC1D2Q9BYX2 928 aa10.62□□□□□ -0.71
NEPRO-215ENST00000474311 CLCN6P51797 869 aa10.61□□□□□ -0.71
NEPRO-215ENST00000474311 ZNF662Q6ZS27 426 aa10.61□□□□□ -0.71
NEPRO-215ENST00000474311 TMED8Q6PL24 325 aaPredicted RBP10.6□□□□□ -0.71
NEPRO-215ENST00000474311 DDX12PQ92771 950 aa10.6□□□□□ -0.71
NEPRO-215ENST00000474311 SF3A1Q15459 793 aaKnown RBP10.6□□□□□ -0.71
NEPRO-215ENST00000474311 TFIP11Q9UBB9 837 aaKnown RBP10.6□□□□□ -0.71
NEPRO-215ENST00000474311 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.6□□□□□ -0.71
NEPRO-215ENST00000474311 MARCH6O60337 910 aa10.59□□□□□ -0.71
NEPRO-215ENST00000474311 PHLDB3Q6NSJ2 640 aa10.58□□□□□ -0.72
NEPRO-215ENST00000474311 UCN2Q96RP3 112 aa10.58□□□□□ -0.72
NEPRO-215ENST00000474311 VAMP1P23763 118 aa10.57□□□□□ -0.72
NEPRO-215ENST00000474311 TICAM2Q86XR7 235 aa10.57□□□□□ -0.72
NEPRO-215ENST00000474311 MAP3K9P80192 1104 aa10.57□□□□□ -0.72
NEPRO-215ENST00000474311 ZNF526Q8TF50 670 aaPredicted RBP10.57□□□□□ -0.72
NEPRO-215ENST00000474311 NLRP7Q8WX94 980 aa10.57□□□□□ -0.72
NEPRO-215ENST00000474311 BCCIPQ9P287 314 aaKnown RBP eCLIP10.56□□□□□ -0.72
NEPRO-215ENST00000474311 PTGER2P43116 358 aa10.55□□□□□ -0.72
NEPRO-215ENST00000474311 RECKO95980 971 aa10.54□□□□□ -0.72
NEPRO-215ENST00000474311 FOXK1P85037 733 aa10.54□□□□□ -0.72
NEPRO-215ENST00000474311 WASHC4Q2M389 1173 aa10.54□□□□□ -0.72
NEPRO-215ENST00000474311 DPH6Q7L8W6 267 aa10.54□□□□□ -0.72
NEPRO-215ENST00000474311 NPAS4Q8IUM7 802 aa10.54□□□□□ -0.72
NEPRO-215ENST00000474311 ALG2Q9H553 416 aa10.54□□□□□ -0.72
NEPRO-215ENST00000474311 VAC14Q08AM6 782 aa10.53□□□□□ -0.72
NEPRO-215ENST00000474311 AP1G2O75843 785 aa10.53□□□□□ -0.72
NEPRO-215ENST00000474311 CLSTN1O94985 981 aa10.53□□□□□ -0.72
NEPRO-215ENST00000474311 MARSP56192 900 aaKnown RBP10.53□□□□□ -0.72
NEPRO-215ENST00000474311 RIC3Q7Z5B4 369 aa10.53□□□□□ -0.72
NEPRO-215ENST00000474311 GJD4Q96KN9 370 aaPredicted RBP10.53□□□□□ -0.72
NEPRO-215ENST00000474311 ZNF710Q8N1W2 664 aa10.52□□□□□ -0.73
NEPRO-215ENST00000474311 MAFBQ9Y5Q3 323 aaPredicted RBP10.52□□□□□ -0.73
NEPRO-215ENST00000474311 NDUFB9Q9Y6M9 179 aa10.52□□□□□ -0.73
NEPRO-215ENST00000474311 ANKRD33BA6NCL7 494 aa10.51□□□□□ -0.73
NEPRO-215ENST00000474311 SOWAHDA6NJG2 315 aa10.51□□□□□ -0.73
NEPRO-215ENST00000474311 ZNF326Q5BKZ1 582 aaKnown RBP10.51□□□□□ -0.73
NEPRO-215ENST00000474311 PRDM16Q9HAZ2 1276 aa10.51□□□□□ -0.73
NEPRO-215ENST00000474311 NPDC1Q9NQX5 325 aaPredicted RBP10.51□□□□□ -0.73
NEPRO-215ENST00000474311 LOC102724159A0A0B4J2E5 919 aa10.5□□□□□ -0.73
NEPRO-215ENST00000474311 GPR37L1O60883 481 aa10.5□□□□□ -0.73
NEPRO-215ENST00000474311 PWP2Q15269 919 aaKnown RBP10.5□□□□□ -0.73
NEPRO-215ENST00000474311 DIXDC1Q155Q3 683 aa10.5□□□□□ -0.73
NEPRO-215ENST00000474311 TMEM164Q5U3C3 297 aa10.5□□□□□ -0.73
NEPRO-215ENST00000474311 MICAL1Q8TDZ2 1067 aa10.5□□□□□ -0.73
NEPRO-215ENST00000474311 MAP3K13O43283 966 aa10.5□□□□□ -0.73
NEPRO-215ENST00000474311 USP17L8P0C7I0 530 aa10.5□□□□□ -0.73
NEPRO-215ENST00000474311 CDHR5Q9HBB8 845 aa10.5□□□□□ -0.73
NEPRO-215ENST00000474311 RIPOR2Q9Y4F9 1068 aa10.5□□□□□ -0.73
NEPRO-215ENST00000474311 C7P10643 843 aa10.49□□□□□ -0.73
NEPRO-215ENST00000474311 TAGLNQ01995 201 aaKnown RBP10.49□□□□□ -0.73
NEPRO-215ENST00000474311 ZMIZ1Q9ULJ6 1067 aa10.49□□□□□ -0.73
NEPRO-215ENST00000474311 ARID4AP29374 1257 aaPredicted RBP10.48□□□□□ -0.73
NEPRO-215ENST00000474311 QPCTQ16769 361 aa10.48□□□□□ -0.73
NEPRO-215ENST00000474311 LHX8Q68G74 356 aa10.48□□□□□ -0.73
NEPRO-215ENST00000474311 PLPP6Q8IY26 295 aa10.48□□□□□ -0.73
NEPRO-215ENST00000474311 STK32AQ8WU08 396 aa10.48□□□□□ -0.73
NEPRO-215ENST00000474311 PLEKHD1A6NEE1 506 aa10.47□□□□□ -0.73
NEPRO-215ENST00000474311 PAK3O75914 559 aaPredicted RBP10.47□□□□□ -0.73
NEPRO-215ENST00000474311 CSPP1Q1MSJ5 1256 aa10.47□□□□□ -0.73
NEPRO-215ENST00000474311 ZRANB1Q9UGI0 708 aa10.47□□□□□ -0.73
NEPRO-215ENST00000474311 PPME1Q9Y570 386 aa10.47□□□□□ -0.73
NEPRO-215ENST00000474311 RAB11FIP3O75154 756 aa10.47□□□□□ -0.73
NEPRO-215ENST00000474311 FAM161AQ3B820 660 aa10.47□□□□□ -0.73
NEPRO-215ENST00000474311 PRR7Q8TB68 274 aa10.47□□□□□ -0.73
NEPRO-215ENST00000474311 POTEIP0CG38 1075 aa10.46□□□□□ -0.74
NEPRO-215ENST00000474311 TUSC1Q2TAM9 212 aa10.46□□□□□ -0.74
NEPRO-215ENST00000474311 METTL3Q86U44 580 aaKnown RBP10.46□□□□□ -0.74
NEPRO-215ENST00000474311 RBM46Q8TBY0 533 aaKnown RBP10.46□□□□□ -0.74
NEPRO-215ENST00000474311 SERPINB4P48594 390 aa10.45□□□□□ -0.74
NEPRO-215ENST00000474311 SSFA2P28290 1259 aa10.44□□□□□ -0.74
NEPRO-215ENST00000474311 ERCC5P28715 1186 aaPredicted RBP10.44□□□□□ -0.74
NEPRO-215ENST00000474311 IRX6P78412 446 aaPredicted RBP10.44□□□□□ -0.74
NEPRO-215ENST00000474311 ELOAQ14241 798 aaKnown RBP10.44□□□□□ -0.74
NEPRO-215ENST00000474311 TBC1D9Q6ZT07 1266 aa10.44□□□□□ -0.74
NEPRO-215ENST00000474311 TMC2Q8TDI7 906 aa10.44□□□□□ -0.74
NEPRO-215ENST00000474311 SPIRE2Q8WWL2 714 aa10.44□□□□□ -0.74
NEPRO-215ENST00000474311 TSNAXIP1Q2TAA8 658 aa10.44□□□□□ -0.74
NEPRO-215ENST00000474311 UPF1Q92900 1129 aaKnown RBP eCLIP10.44□□□□□ -0.74
NEPRO-215ENST00000474311 L3MBTL3Q96JM7 780 aaPredicted RBP10.44□□□□□ -0.74
NEPRO-215ENST00000474311 SPTLC1O15269 473 aa10.43□□□□□ -0.74
NEPRO-215ENST00000474311 FOSBP53539 338 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms