RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 FBXO31Q5XUX0 539 aaPredicted RBP11.08□□□□□ -0.64
CCDC93-207ENST00000474006 RASEFQ8IZ41 740 aa11.08□□□□□ -0.64
CCDC93-207ENST00000474006 EIF2AK4Q9P2K8 1649 aaKnown RBP11.07□□□□□ -0.64
CCDC93-207ENST00000474006 RIOK3O14730 519 aaKnown RBP11.07□□□□□ -0.64
CCDC93-207ENST00000474006 CEBPAP49715 358 aaPredicted RBP11.07□□□□□ -0.64
CCDC93-207ENST00000474006 SPRYD3Q8NCJ5 442 aa11.07□□□□□ -0.64
CCDC93-207ENST00000474006 FAM135AQ9P2D6 1515 aa11.06□□□□□ -0.64
CCDC93-207ENST00000474006 CFAP44Q96MT7 982 aa11.06□□□□□ -0.64
CCDC93-207ENST00000474006 SIN3AQ96ST3 1273 aa11.06□□□□□ -0.64
CCDC93-207ENST00000474006 SIGLEC1Q9BZZ2 1709 aa11.06□□□□□ -0.64
CCDC93-207ENST00000474006 KDM4FA0A1W2PPD8 638 aa11.05□□□□□ -0.64
CCDC93-207ENST00000474006 NEUROD1Q13562 356 aa11.05□□□□□ -0.64
CCDC93-207ENST00000474006 KDM5DQ9BY66 1539 aa11.04□□□□□ -0.64
CCDC93-207ENST00000474006 ANKRD30BQ9BXX2 1392 aa11.04□□□□□ -0.64
CCDC93-207ENST00000474006 UNC13BO14795 1591 aa11.04□□□□□ -0.64
CCDC93-207ENST00000474006 VWDEQ8N2E2 1590 aa11.04□□□□□ -0.64
CCDC93-207ENST00000474006 MROH1Q8NDA8 1641 aa11.04□□□□□ -0.64
CCDC93-207ENST00000474006 RNF17Q9BXT8 1623 aaKnown RBP11.04□□□□□ -0.64
CCDC93-207ENST00000474006 ABCC3O15438 1527 aa11.04□□□□□ -0.64
CCDC93-207ENST00000474006 PRDM15P57071 1507 aaPredicted RBP11.04□□□□□ -0.64
CCDC93-207ENST00000474006 LMTK2Q8IWU2 1503 aa11.04□□□□□ -0.64
CCDC93-207ENST00000474006 CNTLNQ9NXG0 1405 aa11.03□□□□□ -0.64
CCDC93-207ENST00000474006 BCORL1Q5H9F3 1711 aa11.03□□□□□ -0.64
CCDC93-207ENST00000474006 CLSPNQ9HAW4 1339 aa11.03□□□□□ -0.64
CCDC93-207ENST00000474006 DEPDC5O75140 1603 aa11.02□□□□□ -0.64
CCDC93-207ENST00000474006 NPATQ14207 1427 aa11.02□□□□□ -0.64
CCDC93-207ENST00000474006 ARHGAP31Q2M1Z3 1444 aa11.02□□□□□ -0.64
CCDC93-207ENST00000474006 IDI1Q13907 227 aa11.01□□□□□ -0.65
CCDC93-207ENST00000474006 IQGAP3Q86VI3 1631 aa11.01□□□□□ -0.65
CCDC93-207ENST00000474006 PLA2R1Q13018 1463 aa11□□□□□ -0.65
CCDC93-207ENST00000474006 VGFO15240 615 aaPredicted RBP11□□□□□ -0.65
CCDC93-207ENST00000474006 SLC52A1Q9NWF4 448 aa11□□□□□ -0.65
CCDC93-207ENST00000474006 PTPRTO14522 1441 aa11□□□□□ -0.65
CCDC93-207ENST00000474006 SGIP1Q9BQI5 828 aa10.99□□□□□ -0.65
CCDC93-207ENST00000474006 RPRD2Q5VT52 1461 aaKnown RBP10.98□□□□□ -0.65
CCDC93-207ENST00000474006 RGL3Q3MIN7 710 aa10.97□□□□□ -0.65
CCDC93-207ENST00000474006 NOS1P29475 1434 aa10.97□□□□□ -0.65
CCDC93-207ENST00000474006 EFCAB6Q5THR3 1501 aa10.97□□□□□ -0.65
CCDC93-207ENST00000474006 TET3O43151 1660 aa10.95□□□□□ -0.66
CCDC93-207ENST00000474006 CCDC144AA2RUR9 1427 aa10.95□□□□□ -0.66
CCDC93-207ENST00000474006 TNRQ92752 1358 aa10.95□□□□□ -0.66
CCDC93-207ENST00000474006 CHADLQ6NUI6 762 aa10.95□□□□□ -0.66
CCDC93-207ENST00000474006 KDM2AQ9Y2K7 1162 aa10.95□□□□□ -0.66
CCDC93-207ENST00000474006 FARP1Q9Y4F1 1045 aaPredicted RBP10.95□□□□□ -0.66
CCDC93-207ENST00000474006 ADAMTSL3P82987 1691 aa10.95□□□□□ -0.66
CCDC93-207ENST00000474006 PTPRMP28827 1452 aa10.94□□□□□ -0.66
CCDC93-207ENST00000474006 ERVK-7P63135 1459 aa10.94□□□□□ -0.66
CCDC93-207ENST00000474006 L3MBTL2Q969R5 705 aa10.94□□□□□ -0.66
CCDC93-207ENST00000474006 TIMELESSQ9UNS1 1208 aa10.94□□□□□ -0.66
CCDC93-207ENST00000474006 CLTCQ00610 1675 aaKnown RBP10.94□□□□□ -0.66
CCDC93-207ENST00000474006 E9PCH4 1651 aa10.93□□□□□ -0.66
CCDC93-207ENST00000474006 ZNF326Q5BKZ1 582 aaKnown RBP10.93□□□□□ -0.66
CCDC93-207ENST00000474006 MADDQ8WXG6 1647 aa10.93□□□□□ -0.66
CCDC93-207ENST00000474006 CEP152O94986 1710 aa10.92□□□□□ -0.66
CCDC93-207ENST00000474006 ZC3H13Q5T200 1668 aaKnown RBP10.92□□□□□ -0.66
CCDC93-207ENST00000474006 CAMSAP1Q5T5Y3 1602 aa10.92□□□□□ -0.66
CCDC93-207ENST00000474006 STK25O00506 426 aa10.92□□□□□ -0.66
CCDC93-207ENST00000474006 PYGBP11216 843 aa10.92□□□□□ -0.66
CCDC93-207ENST00000474006 BCANQ96GW7 911 aa10.92□□□□□ -0.66
CCDC93-207ENST00000474006 TSHZ2Q9NRE2 1034 aa10.92□□□□□ -0.66
CCDC93-207ENST00000474006 ZEB1P37275 1124 aaPredicted RBP10.91□□□□□ -0.66
CCDC93-207ENST00000474006 FXR2P51116 673 aaKnown RBP eCLIP10.91□□□□□ -0.66
CCDC93-207ENST00000474006 NKX1-1Q15270 411 aaPredicted RBP10.91□□□□□ -0.66
CCDC93-207ENST00000474006 DCAF11Q8TEB1 546 aa10.91□□□□□ -0.66
CCDC93-207ENST00000474006 PPP1R15AO75807 674 aaPredicted RBP10.9□□□□□ -0.66
CCDC93-207ENST00000474006 THEMISQ8N1K5 641 aaPredicted RBP10.9□□□□□ -0.66
CCDC93-207ENST00000474006 SPATA31D1Q6ZQQ2 1576 aa10.9□□□□□ -0.67
CCDC93-207ENST00000474006 TONSLQ96HA7 1378 aa10.9□□□□□ -0.67
CCDC93-207ENST00000474006 TRPM2O94759 1503 aa10.89□□□□□ -0.67
CCDC93-207ENST00000474006 PRKAR2AP13861 404 aaKnown RBP10.89□□□□□ -0.67
CCDC93-207ENST00000474006 SPATA31E1Q6ZUB1 1445 aa10.89□□□□□ -0.67
CCDC93-207ENST00000474006 UGGT1Q9NYU2 1555 aa10.89□□□□□ -0.67
CCDC93-207ENST00000474006 RPGRIP1LQ68CZ1 1315 aa10.88□□□□□ -0.67
CCDC93-207ENST00000474006 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.88□□□□□ -0.67
CCDC93-207ENST00000474006 NUTM2DQ5VT03 806 aaPredicted RBP10.88□□□□□ -0.67
CCDC93-207ENST00000474006 ZFP91Q96JP5 570 aaPredicted RBP10.88□□□□□ -0.67
CCDC93-207ENST00000474006 RIMS1Q86UR5 1692 aaKnown RBP10.88□□□□□ -0.67
CCDC93-207ENST00000474006 FER1L4A9Z1Z3 1794 aa10.88□□□□□ -0.67
CCDC93-207ENST00000474006 SYNMO15061 1565 aa10.87□□□□□ -0.67
CCDC93-207ENST00000474006 HDGFP51858 240 aaKnown RBP10.87□□□□□ -0.67
CCDC93-207ENST00000474006 STAC3Q96MF2 364 aa10.87□□□□□ -0.67
CCDC93-207ENST00000474006 MROH2AA6NES4 1674 aa10.87□□□□□ -0.67
CCDC93-207ENST00000474006 NLRP1Q9C000 1473 aa10.87□□□□□ -0.67
CCDC93-207ENST00000474006 GTPBP6O43824 516 aaPredicted RBP10.86□□□□□ -0.67
CCDC93-207ENST00000474006 BCL11BQ9C0K0 894 aaPredicted RBP10.86□□□□□ -0.67
CCDC93-207ENST00000474006 TSPYL2Q9H2G4 693 aaPredicted RBP10.86□□□□□ -0.67
CCDC93-207ENST00000474006 C3P01024 1663 aa10.85□□□□□ -0.67
CCDC93-207ENST00000474006 LTKP29376 864 aa10.85□□□□□ -0.67
CCDC93-207ENST00000474006 ZNF467Q7Z7K2 595 aaPredicted RBP10.85□□□□□ -0.67
CCDC93-207ENST00000474006 TXNDC2Q86VQ3 553 aa10.85□□□□□ -0.67
CCDC93-207ENST00000474006 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.85□□□□□ -0.67
CCDC93-207ENST00000474006 PREX1Q8TCU6 1659 aa10.85□□□□□ -0.67
CCDC93-207ENST00000474006 CLTCL1P53675 1640 aa10.84□□□□□ -0.67
CCDC93-207ENST00000474006 NBPF8Q3BBV2 869 aa10.84□□□□□ -0.67
CCDC93-207ENST00000474006 EID1Q9Y6B2 187 aa10.84□□□□□ -0.67
CCDC93-207ENST00000474006 STK24Q9Y6E0 443 aa10.84□□□□□ -0.67
CCDC93-207ENST00000474006 A2ML1A8K2U0 1454 aa10.84□□□□□ -0.67
CCDC93-207ENST00000474006 ADGRF5Q8IZF2 1346 aa10.84□□□□□ -0.67
CCDC93-207ENST00000474006 TMEM2Q9UHN6 1383 aa10.83□□□□□ -0.68
CCDC93-207ENST00000474006 ANKLE2Q86XL3 938 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms