RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 ZNF652Q9Y2D9 606 aa11.97□□□□□ -0.49
SCAF11-205ENST00000465950 ANKRD50Q9ULJ7 1429 aa11.97□□□□□ -0.49
SCAF11-205ENST00000465950 NCLP19338 710 aaKnown RBP11.96□□□□□ -0.49
SCAF11-205ENST00000465950 RALBP1Q15311 655 aa11.96□□□□□ -0.5
SCAF11-205ENST00000465950 PEG3Q9GZU2 1588 aa11.96□□□□□ -0.5
SCAF11-205ENST00000465950 CDCA7Q9BWT1 371 aaPredicted RBP11.95□□□□□ -0.5
SCAF11-205ENST00000465950 PNISRQ8TF01 805 aaKnown RBP11.95□□□□□ -0.5
SCAF11-205ENST00000465950 MCCP23508 829 aa11.94□□□□□ -0.5
SCAF11-205ENST00000465950 NEUROD2Q15784 382 aa11.94□□□□□ -0.5
SCAF11-205ENST00000465950 WDR7Q9Y4E6 1490 aa11.93□□□□□ -0.5
SCAF11-205ENST00000465950 EHBP1L1Q8N3D4 1523 aa11.93□□□□□ -0.5
SCAF11-205ENST00000465950 TOP2BQ02880 1626 aa11.93□□□□□ -0.5
SCAF11-205ENST00000465950 NGEFQ8N5V2 710 aa11.93□□□□□ -0.5
SCAF11-205ENST00000465950 BEGAINQ9BUH8 593 aa11.93□□□□□ -0.5
SCAF11-205ENST00000465950 GAS2L2Q8NHY3 880 aa11.93□□□□□ -0.5
SCAF11-205ENST00000465950 WDR62O43379 1518 aa11.92□□□□□ -0.5
SCAF11-205ENST00000465950 URB2Q14146 1524 aaKnown RBP11.92□□□□□ -0.5
SCAF11-205ENST00000465950 HNRNPUQ00839 825 aaKnown RBP eCLIP11.92□□□□□ -0.5
SCAF11-205ENST00000465950 DDX10Q13206 875 aaKnown RBP11.92□□□□□ -0.5
SCAF11-205ENST00000465950 CCDC34Q96HJ3 373 aa11.92□□□□□ -0.5
SCAF11-205ENST00000465950 TCEAL9Q9UHQ7 104 aa11.92□□□□□ -0.5
SCAF11-205ENST00000465950 A0A087WZG4 1122 aa11.92□□□□□ -0.5
SCAF11-205ENST00000465950 ADAMTS2O95450 1211 aa11.92□□□□□ -0.5
SCAF11-205ENST00000465950 STK32BQ9NY57 414 aa11.92□□□□□ -0.5
SCAF11-205ENST00000465950 EXOC5O00471 708 aa11.92□□□□□ -0.5
SCAF11-205ENST00000465950 KIF14Q15058 1648 aa11.92□□□□□ -0.5
SCAF11-205ENST00000465950 SMARCC1Q92922 1105 aaPredicted RBP11.91□□□□□ -0.5
SCAF11-205ENST00000465950 CC2D1BQ5T0F9 858 aaKnown RBP11.91□□□□□ -0.5
SCAF11-205ENST00000465950 SALL2Q9Y467 1007 aaPredicted RBP11.91□□□□□ -0.5
SCAF11-205ENST00000465950 FBXW7Q969H0 707 aa11.9□□□□□ -0.5
SCAF11-205ENST00000465950 SLC26A8Q96RN1 970 aa11.9□□□□□ -0.5
SCAF11-205ENST00000465950 TMOD2Q9NZR1 351 aa11.9□□□□□ -0.5
SCAF11-205ENST00000465950 USP35Q9P2H5 1018 aa11.9□□□□□ -0.5
SCAF11-205ENST00000465950 RPRD2Q5VT52 1461 aaKnown RBP11.89□□□□□ -0.51
SCAF11-205ENST00000465950 ZNF518AQ6AHZ1 1483 aa11.89□□□□□ -0.51
SCAF11-205ENST00000465950 CCDC141Q6ZP82 1450 aa11.89□□□□□ -0.51
SCAF11-205ENST00000465950 C9orf84Q5VXU9 1444 aa11.89□□□□□ -0.51
SCAF11-205ENST00000465950 RTEL1-TNFRSF6BF6WH68 1400 aa11.89□□□□□ -0.51
SCAF11-205ENST00000465950 PAXIP1Q6ZW49 1069 aaPredicted RBP11.89□□□□□ -0.51
SCAF11-205ENST00000465950 ZRANB1Q9UGI0 708 aa11.89□□□□□ -0.51
SCAF11-205ENST00000465950 ZPR1O75312 459 aa11.89□□□□□ -0.51
SCAF11-205ENST00000465950 KIAA1211Q6ZU35 1233 aa11.88□□□□□ -0.51
SCAF11-205ENST00000465950 UHRF1BP1LA0JNW5 1464 aa11.88□□□□□ -0.51
SCAF11-205ENST00000465950 RBM42Q9BTD8 480 aaKnown RBP11.88□□□□□ -0.51
SCAF11-205ENST00000465950 C19orf44Q9H6X5 657 aa11.88□□□□□ -0.51
SCAF11-205ENST00000465950 CLSTN1O94985 981 aa11.88□□□□□ -0.51
SCAF11-205ENST00000465950 CABP4P57796 275 aa11.88□□□□□ -0.51
SCAF11-205ENST00000465950 FKBP8Q14318 412 aa11.88□□□□□ -0.51
SCAF11-205ENST00000465950 ATAD2Q6PL18 1390 aa11.88□□□□□ -0.51
SCAF11-205ENST00000465950 GNL3LQ9NVN8 582 aaKnown RBP11.87□□□□□ -0.51
SCAF11-205ENST00000465950 PHF8Q9UPP1 1060 aa11.87□□□□□ -0.51
SCAF11-205ENST00000465950 STARD3NLO95772 234 aa11.87□□□□□ -0.51
SCAF11-205ENST00000465950 AK7Q96M32 723 aa11.87□□□□□ -0.51
SCAF11-205ENST00000465950 TEX13AQ9BXU3 409 aaPredicted RBP11.86□□□□□ -0.51
SCAF11-205ENST00000465950 DIAPH1O60610 1272 aaKnown RBP11.85□□□□□ -0.51
SCAF11-205ENST00000465950 ZNF608Q9ULD9 1512 aaPredicted RBP11.85□□□□□ -0.51
SCAF11-205ENST00000465950 ABCC10Q5T3U5 1492 aa11.84□□□□□ -0.51
SCAF11-205ENST00000465950 AMOTL2Q9Y2J4 779 aa11.84□□□□□ -0.51
SCAF11-205ENST00000465950 ABCC2Q92887 1545 aa11.84□□□□□ -0.51
SCAF11-205ENST00000465950 C8orf37Q96NL8 207 aa11.83□□□□□ -0.52
SCAF11-205ENST00000465950 DHX29Q7Z478 1369 aaKnown RBP11.83□□□□□ -0.52
SCAF11-205ENST00000465950 GNL2Q13823 731 aaKnown RBP11.83□□□□□ -0.52
SCAF11-205ENST00000465950 ANP32AP39687 249 aaKnown RBP11.82□□□□□ -0.52
SCAF11-205ENST00000465950 RAB3GAP2Q9H2M9 1393 aa11.82□□□□□ -0.52
SCAF11-205ENST00000465950 NF2P35240 595 aa11.82□□□□□ -0.52
SCAF11-205ENST00000465950 KRT28Q7Z3Y7 464 aa11.82□□□□□ -0.52
SCAF11-205ENST00000465950 NEO1Q92859 1461 aa11.82□□□□□ -0.52
SCAF11-205ENST00000465950 FGD6Q6ZV73 1430 aa11.81□□□□□ -0.52
SCAF11-205ENST00000465950 WWC2Q6AWC2 1192 aa11.81□□□□□ -0.52
SCAF11-205ENST00000465950 FLAD1Q8NFF5 587 aa11.81□□□□□ -0.52
SCAF11-205ENST00000465950 TULP1O00294 542 aaPredicted RBP11.81□□□□□ -0.52
SCAF11-205ENST00000465950 MARCH6O60337 910 aa11.81□□□□□ -0.52
SCAF11-205ENST00000465950 ZNF710Q8N1W2 664 aa11.8□□□□□ -0.52
SCAF11-205ENST00000465950 DDX54Q8TDD1 881 aaKnown RBP11.8□□□□□ -0.52
SCAF11-205ENST00000465950 HIRIP3Q9BW71 556 aaPredicted RBP11.8□□□□□ -0.52
SCAF11-205ENST00000465950 TMOD3Q9NYL9 352 aa11.8□□□□□ -0.52
SCAF11-205ENST00000465950 ATP10AO60312 1499 aa11.8□□□□□ -0.52
SCAF11-205ENST00000465950 HSP90AB4PQ58FF6 505 aa11.8□□□□□ -0.52
SCAF11-205ENST00000465950 KIF3AQ9Y496 699 aa11.8□□□□□ -0.52
SCAF11-205ENST00000465950 ARHGEF6Q15052 776 aa11.8□□□□□ -0.52
SCAF11-205ENST00000465950 HSP90AB3PQ58FF7 597 aa11.8□□□□□ -0.52
SCAF11-205ENST00000465950 NAP1L2Q9ULW6 460 aaPredicted RBP11.8□□□□□ -0.52
SCAF11-205ENST00000465950 CCDC61Q9Y6R9 512 aa11.8□□□□□ -0.52
SCAF11-205ENST00000465950 RXRBP28702 533 aa11.8□□□□□ -0.52
SCAF11-205ENST00000465950 CEBPAP49715 358 aaPredicted RBP11.8□□□□□ -0.52
SCAF11-205ENST00000465950 CDK19Q9BWU1 502 aa11.8□□□□□ -0.52
SCAF11-205ENST00000465950 GOLGA6L22H0YM25 854 aa11.79□□□□□ -0.52
SCAF11-205ENST00000465950 AMOTQ4VCS5 1084 aa11.79□□□□□ -0.52
SCAF11-205ENST00000465950 CNKSR2Q8WXI2 1034 aa11.79□□□□□ -0.52
SCAF11-205ENST00000465950 PRAM1Q96QH2 718 aa11.79□□□□□ -0.52
SCAF11-205ENST00000465950 PLCH2O75038 1416 aa11.79□□□□□ -0.52
SCAF11-205ENST00000465950 HTATSF1O43719 755 aaKnown RBP11.79□□□□□ -0.52
SCAF11-205ENST00000465950 C9orf78Q9NZ63 289 aaPredicted RBP11.79□□□□□ -0.52
SCAF11-205ENST00000465950 CABP2Q9NPB3 220 aa11.79□□□□□ -0.52
SCAF11-205ENST00000465950 DISP3Q9P2K9 1392 aa11.78□□□□□ -0.52
SCAF11-205ENST00000465950 CFAP74Q9C0B2 1584 aa11.78□□□□□ -0.52
SCAF11-205ENST00000465950 SLC3A2P08195 630 aaKnown RBP11.78□□□□□ -0.52
SCAF11-205ENST00000465950 KCNA6P17658 529 aa11.77□□□□□ -0.52
SCAF11-205ENST00000465950 BECN1Q14457 450 aa11.77□□□□□ -0.52
SCAF11-205ENST00000465950 SYNE3Q6ZMZ3 975 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms