RNA–Protein interactions for RNA: ENST00000465143.1

ITSN1-223, Transcript of intersectin 1, human

TSL 3

Gene ITSN1, Length 614 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-223	ENST00000465143	ANKLE2	Q86XL3	938 aa		11.43	□□□□□ -0.58
ITSN1-223	ENST00000465143	POTEI	P0CG38	1075 aa		11.42	□□□□□ -0.58
ITSN1-223	ENST00000465143	CAMSAP1	Q5T5Y3	1602 aa		11.42	□□□□□ -0.58
ITSN1-223	ENST00000465143	MROH1	Q8NDA8	1641 aa		11.42	□□□□□ -0.58
ITSN1-223	ENST00000465143	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	11.41	□□□□□ -0.58
ITSN1-223	ENST00000465143	TRIM52	Q96A61	297 aa		11.41	□□□□□ -0.58
ITSN1-223	ENST00000465143	PTPRT	O14522	1441 aa		11.41	□□□□□ -0.58
ITSN1-223	ENST00000465143	SETD1B	Q9UPS6	1966 aa	Known RBP	11.41	□□□□□ -0.58
ITSN1-223	ENST00000465143	PLA2R1	Q13018	1463 aa		11.4	□□□□□ -0.58
ITSN1-223	ENST00000465143	SLC52A1	Q9NWF4	448 aa		11.4	□□□□□ -0.58
ITSN1-223	ENST00000465143	LMTK2	Q8IWU2	1503 aa		11.4	□□□□□ -0.59
ITSN1-223	ENST00000465143	MYO3A	Q8NEV4	1616 aa		11.39	□□□□□ -0.59
ITSN1-223	ENST00000465143	IDI1	Q13907	227 aa		11.39	□□□□□ -0.59
ITSN1-223	ENST00000465143	EID1	Q9Y6B2	187 aa		11.39	□□□□□ -0.59
ITSN1-223	ENST00000465143	ZC3H13	Q5T200	1668 aa	Known RBP	11.39	□□□□□ -0.59
ITSN1-223	ENST00000465143	SPATA31D1	Q6ZQQ2	1576 aa		11.38	□□□□□ -0.59
ITSN1-223	ENST00000465143	UGGT1	Q9NYU2	1555 aa		11.38	□□□□□ -0.59
ITSN1-223	ENST00000465143	CHGA	P10645	457 aa	Known RBP	11.38	□□□□□ -0.59
ITSN1-223	ENST00000465143	CERK	Q8TCT0	537 aa		11.38	□□□□□ -0.59
ITSN1-223	ENST00000465143	HFM1	A2PYH4	1435 aa		11.37	□□□□□ -0.59
ITSN1-223	ENST00000465143	NAIP	Q13075	1403 aa		11.37	□□□□□ -0.59
ITSN1-223	ENST00000465143	ILDR1	Q86SU0	546 aa	Predicted RBP	11.37	□□□□□ -0.59
ITSN1-223	ENST00000465143	TXNDC2	Q86VQ3	553 aa		11.37	□□□□□ -0.59
ITSN1-223	ENST00000465143	VWDE	Q8N2E2	1590 aa		11.37	□□□□□ -0.59
ITSN1-223	ENST00000465143	DEPDC5	O75140	1603 aa		11.36	□□□□□ -0.59
ITSN1-223	ENST00000465143	RPRD2	Q5VT52	1461 aa	Known RBP	11.36	□□□□□ -0.59
ITSN1-223	ENST00000465143	BCAN	Q96GW7	911 aa		11.35	□□□□□ -0.59
ITSN1-223	ENST00000465143	EFCAB6	Q5THR3	1501 aa		11.35	□□□□□ -0.59
ITSN1-223	ENST00000465143	NOS1	P29475	1434 aa		11.35	□□□□□ -0.59
ITSN1-223	ENST00000465143	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	11.35	□□□□□ -0.59
ITSN1-223	ENST00000465143	PPP1R15A	O75807	674 aa	Predicted RBP	11.34	□□□□□ -0.59
ITSN1-223	ENST00000465143	HDGF	P51858	240 aa	Known RBP	11.34	□□□□□ -0.59
ITSN1-223	ENST00000465143	FBXO41	Q8TF61	875 aa		11.34	□□□□□ -0.59
ITSN1-223	ENST00000465143	NPHP4	O75161	1426 aa	Predicted RBP	11.34	□□□□□ -0.59
ITSN1-223	ENST00000465143	TMEM2	Q9UHN6	1383 aa		11.33	□□□□□ -0.6
ITSN1-223	ENST00000465143	LTK	P29376	864 aa		11.33	□□□□□ -0.6
ITSN1-223	ENST00000465143	ZNF142	P52746	1687 aa	Predicted RBP	11.33	□□□□□ -0.6
ITSN1-223	ENST00000465143	CEP152	O94986	1710 aa		11.32	□□□□□ -0.6
ITSN1-223	ENST00000465143	SETD5	Q9C0A6	1442 aa		11.31	□□□□□ -0.6
ITSN1-223	ENST00000465143	UNC13B	O14795	1591 aa		11.31	□□□□□ -0.6
ITSN1-223	ENST00000465143	SCAF11	Q99590	1463 aa	Known RBP	11.31	□□□□□ -0.6
ITSN1-223	ENST00000465143	ACIN1	Q9UKV3	1341 aa	Known RBP	11.3	□□□□□ -0.6
ITSN1-223	ENST00000465143	STRC	Q7RTU9	1775 aa		11.29	□□□□□ -0.6
ITSN1-223	ENST00000465143	ZNF326	Q5BKZ1	582 aa	Known RBP	11.29	□□□□□ -0.6
ITSN1-223	ENST00000465143	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
ITSN1-223	ENST00000465143	RAB3GAP2	Q9H2M9	1393 aa		11.28	□□□□□ -0.6
ITSN1-223	ENST00000465143	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.28	□□□□□ -0.6
ITSN1-223	ENST00000465143	CREBZF	Q9NS37	354 aa		11.28	□□□□□ -0.6
ITSN1-223	ENST00000465143	TET3	O43151	1660 aa		11.27	□□□□□ -0.6
ITSN1-223	ENST00000465143	MED14	O60244	1454 aa		11.27	□□□□□ -0.6
ITSN1-223	ENST00000465143	ARHGAP23	Q9P227	1491 aa		11.27	□□□□□ -0.6
ITSN1-223	ENST00000465143	MPHOSPH9	Q99550	1183 aa		11.27	□□□□□ -0.61
ITSN1-223	ENST00000465143	SYNM	O15061	1565 aa		11.27	□□□□□ -0.61
ITSN1-223	ENST00000465143	IQGAP3	Q86VI3	1631 aa		11.27	□□□□□ -0.61
ITSN1-223	ENST00000465143	SLIT1	O75093	1534 aa		11.26	□□□□□ -0.61
ITSN1-223	ENST00000465143	SLC26A8	Q96RN1	970 aa		11.26	□□□□□ -0.61
ITSN1-223	ENST00000465143	GCC2	Q8IWJ2	1684 aa		11.26	□□□□□ -0.61
ITSN1-223	ENST00000465143	RIMS2	Q9UQ26	1411 aa		11.26	□□□□□ -0.61
ITSN1-223	ENST00000465143	ADGRB3	O60242	1522 aa		11.25	□□□□□ -0.61
ITSN1-223	ENST00000465143	ZRANB1	Q9UGI0	708 aa		11.25	□□□□□ -0.61
ITSN1-223	ENST00000465143	NEURL4	Q96JN8	1562 aa		11.24	□□□□□ -0.61
ITSN1-223	ENST00000465143	UBAP1L	F5GYI3	381 aa		11.24	□□□□□ -0.61
ITSN1-223	ENST00000465143	HRC	P23327	699 aa		11.24	□□□□□ -0.61
ITSN1-223	ENST00000465143	CCER1	Q8TC90	406 aa	Predicted RBP	11.24	□□□□□ -0.61
ITSN1-223	ENST00000465143	PIK3C2B	O00750	1634 aa		11.24	□□□□□ -0.61
ITSN1-223	ENST00000465143	LTBP4	Q8N2S1	1624 aa		11.24	□□□□□ -0.61
ITSN1-223	ENST00000465143	DCBLD2	Q96PD2	775 aa		11.23	□□□□□ -0.61
ITSN1-223	ENST00000465143	PLEKHG1	Q9ULL1	1385 aa		11.22	□□□□□ -0.61
ITSN1-223	ENST00000465143	UBR1	Q8IWV7	1749 aa		11.21	□□□□□ -0.61
ITSN1-223	ENST00000465143	CPS1	P31327	1500 aa		11.21	□□□□□ -0.61
ITSN1-223	ENST00000465143	ZFYVE9	O95405	1425 aa		11.21	□□□□□ -0.61
ITSN1-223	ENST00000465143	TOM1	O60784	492 aa		11.21	□□□□□ -0.61
ITSN1-223	ENST00000465143	KCNA6	P17658	529 aa		11.21	□□□□□ -0.61
ITSN1-223	ENST00000465143	ZNF579	Q8NAF0	562 aa	Known RBP	11.21	□□□□□ -0.61
ITSN1-223	ENST00000465143		E9PCH4	1651 aa		11.2	□□□□□ -0.62
ITSN1-223	ENST00000465143	IQSEC2	Q5JU85	1478 aa		11.2	□□□□□ -0.62
ITSN1-223	ENST00000465143	CLCN6	P51797	869 aa		11.2	□□□□□ -0.62
ITSN1-223	ENST00000465143	CFAP65	Q6ZU64	1925 aa	Known RBP	11.19	□□□□□ -0.62
ITSN1-223	ENST00000465143	CCDC144A	A2RUR9	1427 aa		11.19	□□□□□ -0.62
ITSN1-223	ENST00000465143	DHX57	Q6P158	1386 aa	Known RBP	11.19	□□□□□ -0.62
ITSN1-223	ENST00000465143	PIP4K2B	P78356	416 aa		11.19	□□□□□ -0.62
ITSN1-223	ENST00000465143	PROSER2	Q86WR7	435 aa	Predicted RBP	11.19	□□□□□ -0.62
ITSN1-223	ENST00000465143	TBX22	Q9Y458	520 aa		11.19	□□□□□ -0.62
ITSN1-223	ENST00000465143	IQGAP1	P46940	1657 aa		11.18	□□□□□ -0.62
ITSN1-223	ENST00000465143	VGF	O15240	615 aa	Predicted RBP	11.18	□□□□□ -0.62
ITSN1-223	ENST00000465143	RGL3	Q3MIN7	710 aa		11.18	□□□□□ -0.62
ITSN1-223	ENST00000465143	TRPM2	O94759	1503 aa		11.18	□□□□□ -0.62
ITSN1-223	ENST00000465143	RPGRIP1L	Q68CZ1	1315 aa		11.17	□□□□□ -0.62
ITSN1-223	ENST00000465143	SPDYE4	A6NLX3	237 aa		11.17	□□□□□ -0.62
ITSN1-223	ENST00000465143	GALR2	O43603	387 aa	Predicted RBP	11.17	□□□□□ -0.62
ITSN1-223	ENST00000465143	POLR1A	O95602	1720 aa	Predicted RBP	11.17	□□□□□ -0.62
ITSN1-223	ENST00000465143	C14orf37	Q86TY3	774 aa		11.16	□□□□□ -0.62
ITSN1-223	ENST00000465143	RBM33	Q96EV2	1170 aa	Known RBP	11.16	□□□□□ -0.62
ITSN1-223	ENST00000465143	KDM5A	P29375	1690 aa	Known RBP	11.16	□□□□□ -0.62
ITSN1-223	ENST00000465143	TMEM131L	A2VDJ0	1609 aa		11.16	□□□□□ -0.62
ITSN1-223	ENST00000465143	TMEM94	Q12767	1356 aa		11.16	□□□□□ -0.62
ITSN1-223	ENST00000465143	LRRC7	Q96NW7	1537 aa		11.14	□□□□□ -0.63
ITSN1-223	ENST00000465143	AMOTL2	Q9Y2J4	779 aa		11.14	□□□□□ -0.63
ITSN1-223	ENST00000465143	ADAMTS13	Q76LX8	1427 aa		11.14	□□□□□ -0.63
ITSN1-223	ENST00000465143	PIK3R4	Q99570	1358 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms