RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 TRIM52Q96A61 297 aa15.44■□□□□ 0.06
APP-213ENST00000464867 PHF12Q96QT6 1004 aa15.44■□□□□ 0.06
APP-213ENST00000464867 XIRP1Q702N8 1843 aaKnown RBP15.43■□□□□ 0.06
APP-213ENST00000464867 ROBO1Q9Y6N7 1651 aa15.42■□□□□ 0.06
APP-213ENST00000464867 CCNB3Q8WWL7 1395 aa15.42■□□□□ 0.06
APP-213ENST00000464867 MEX3CQ5U5Q3 659 aaKnown RBP15.42■□□□□ 0.06
APP-213ENST00000464867 CASKIN1Q8WXD9 1431 aa15.42■□□□□ 0.06
APP-213ENST00000464867 ZC3H13Q5T200 1668 aaKnown RBP15.41■□□□□ 0.06
APP-213ENST00000464867 POTEIP0CG38 1075 aa15.41■□□□□ 0.06
APP-213ENST00000464867 CLCN6P51797 869 aa15.41■□□□□ 0.06
APP-213ENST00000464867 PLCD3Q8N3E9 789 aa15.41■□□□□ 0.06
APP-213ENST00000464867 JCADQ9P266 1359 aa15.4■□□□□ 0.06
APP-213ENST00000464867 RTEL1-TNFRSF6BF6WH68 1400 aa15.4■□□□□ 0.06
APP-213ENST00000464867 SRCAPQ6ZRS2 3230 aa15.39■□□□□ 0.05
APP-213ENST00000464867 PLEKHG5O94827 1062 aa15.39■□□□□ 0.05
APP-213ENST00000464867 LRRC9Q6ZRR7 1453 aa15.39■□□□□ 0.05
APP-213ENST00000464867 SCAF11Q99590 1463 aaKnown RBP15.39■□□□□ 0.05
APP-213ENST00000464867 TXNDC2Q86VQ3 553 aa15.38■□□□□ 0.05
APP-213ENST00000464867 EID1Q9Y6B2 187 aa15.38■□□□□ 0.05
APP-213ENST00000464867 PHLPP1O60346 1717 aa15.37■□□□□ 0.05
APP-213ENST00000464867 GALR2O43603 387 aaPredicted RBP15.37■□□□□ 0.05
APP-213ENST00000464867 RXRBP28702 533 aa15.37■□□□□ 0.05
APP-213ENST00000464867 TSPYL2Q9H2G4 693 aaPredicted RBP15.36■□□□□ 0.05
APP-213ENST00000464867 TMEM94Q12767 1356 aa15.36■□□□□ 0.05
APP-213ENST00000464867 PROSER2Q86WR7 435 aaPredicted RBP15.34■□□□□ 0.05
APP-213ENST00000464867 UBR1Q8IWV7 1749 aa15.33■□□□□ 0.04
APP-213ENST00000464867 SPATA31A6Q5VVP1 1343 aa15.33■□□□□ 0.04
APP-213ENST00000464867 LTKP29376 864 aa15.32■□□□□ 0.04
APP-213ENST00000464867 RASEFQ8IZ41 740 aa15.32■□□□□ 0.04
APP-213ENST00000464867 CFAP65Q6ZU64 1925 aaKnown RBP15.32■□□□□ 0.04
APP-213ENST00000464867 ZNF644Q9H582 1327 aaPredicted RBP15.32■□□□□ 0.04
APP-213ENST00000464867 FYCO1Q9BQS8 1478 aa15.32■□□□□ 0.04
APP-213ENST00000464867 KCNA6P17658 529 aa15.31■□□□□ 0.04
APP-213ENST00000464867 SLAIN2Q9P270 581 aa15.31■□□□□ 0.04
APP-213ENST00000464867 MSH6P52701 1360 aa15.3■□□□□ 0.04
APP-213ENST00000464867 MBD5Q9P267 1494 aa15.3■□□□□ 0.04
APP-213ENST00000464867 RSPH4AQ5TD94 716 aa15.29■□□□□ 0.04
APP-213ENST00000464867 FBXO3Q9UK99 471 aa15.29■□□□□ 0.04
APP-213ENST00000464867 CCDC61Q9Y6R9 512 aa15.29■□□□□ 0.04
APP-213ENST00000464867 ERVK-7P63135 1459 aa15.28■□□□□ 0.04
APP-213ENST00000464867 CDK12Q9NYV4 1490 aaPredicted RBP15.28■□□□□ 0.04
APP-213ENST00000464867 MTUS2Q5JR59 1369 aa15.28■□□□□ 0.04
APP-213ENST00000464867 SLIT1O75093 1534 aa15.27■□□□□ 0.04
APP-213ENST00000464867 RBM33Q96EV2 1170 aaKnown RBP15.27■□□□□ 0.04
APP-213ENST00000464867 DCBLD2Q96PD2 775 aa15.27■□□□□ 0.04
APP-213ENST00000464867 ARHGAP23Q9P227 1491 aa15.27■□□□□ 0.03
APP-213ENST00000464867 FGD6Q6ZV73 1430 aa15.26■□□□□ 0.03
APP-213ENST00000464867 CCDC141Q6ZP82 1450 aa15.26■□□□□ 0.03
APP-213ENST00000464867 TSPY4P0CV99 314 aa15.25■□□□□ 0.03
APP-213ENST00000464867 TSPY10P0CW01 314 aa15.25■□□□□ 0.03
APP-213ENST00000464867 LRP6O75581 1613 aa15.25■□□□□ 0.03
APP-213ENST00000464867 ABCC3O15438 1527 aa15.24■□□□□ 0.03
APP-213ENST00000464867 MAP3K1Q13233 1512 aa15.24■□□□□ 0.03
APP-213ENST00000464867 NCOA2Q15596 1464 aa15.24■□□□□ 0.03
APP-213ENST00000464867 PRDM15P57071 1507 aaPredicted RBP15.23■□□□□ 0.03
APP-213ENST00000464867 NUTM2BA6NNL0 878 aaPredicted RBP15.23■□□□□ 0.03
APP-213ENST00000464867 NUTM2EB1AL46 878 aaPredicted RBP15.23■□□□□ 0.03
APP-213ENST00000464867 NUBP1P53384 320 aa15.23■□□□□ 0.03
APP-213ENST00000464867 NUTM2DQ5VT03 806 aaPredicted RBP15.23■□□□□ 0.03
APP-213ENST00000464867 NUTM2AQ8IVF1 878 aaPredicted RBP15.23■□□□□ 0.03
APP-213ENST00000464867 COL16A1Q07092 1604 aaPredicted RBP15.23■□□□□ 0.03
APP-213ENST00000464867 BCANQ96GW7 911 aa15.22■□□□□ 0.03
APP-213ENST00000464867 MS4A3Q96HJ5 214 aa15.22■□□□□ 0.03
APP-213ENST00000464867 ZBTB47Q9UFB7 747 aaPredicted RBP15.22■□□□□ 0.03
APP-213ENST00000464867 NKTRP30414 1462 aaKnown RBP15.21■□□□□ 0.03
APP-213ENST00000464867 TIAM1Q13009 1591 aa15.21■□□□□ 0.03
APP-213ENST00000464867 SLC26A8Q96RN1 970 aa15.21■□□□□ 0.03
APP-213ENST00000464867 TMEM2Q9UHN6 1383 aa15.21■□□□□ 0.02
APP-213ENST00000464867 SHPRHQ149N8 1683 aa15.2■□□□□ 0.02
APP-213ENST00000464867 AFF2P51816 1311 aa15.18■□□□□ 0.02
APP-213ENST00000464867 VASPP50552 380 aaPredicted RBP15.18■□□□□ 0.02
APP-213ENST00000464867 RBM6P78332 1123 aaKnown RBP15.18■□□□□ 0.02
APP-213ENST00000464867 C14orf37Q86TY3 774 aa15.18■□□□□ 0.02
APP-213ENST00000464867 KIF12Q96FN5 646 aa15.18■□□□□ 0.02
APP-213ENST00000464867 CEP152O94986 1710 aa15.17■□□□□ 0.02
APP-213ENST00000464867 ATAD2Q6PL18 1390 aa15.16■□□□□ 0.02
APP-213ENST00000464867 QTRT2Q9H974 415 aaKnown RBP15.16■□□□□ 0.02
APP-213ENST00000464867 PIK3C2BO00750 1634 aa15.15■□□□□ 0.02
APP-213ENST00000464867 NGLY1Q96IV0 654 aa15.15■□□□□ 0.02
APP-213ENST00000464867 CAMSAP2Q08AD1 1489 aa15.14■□□□□ 0.01
APP-213ENST00000464867 EIF2AK4Q9P2K8 1649 aaKnown RBP15.14■□□□□ 0.01
APP-213ENST00000464867 KDM5AP29375 1690 aaKnown RBP15.14■□□□□ 0.01
APP-213ENST00000464867 RGS12O14924 1447 aa15.14■□□□□ 0.01
APP-213ENST00000464867 NWD1Q149M9 1564 aa15.14■□□□□ 0.01
APP-213ENST00000464867 EFCAB6Q5THR3 1501 aa15.13■□□□□ 0.01
APP-213ENST00000464867 TET3O43151 1660 aa15.13■□□□□ 0.01
APP-213ENST00000464867 ATF3P18847 181 aa15.13■□□□□ 0.01
APP-213ENST00000464867 CADPS2Q86UW7 1296 aa15.13■□□□□ 0.01
APP-213ENST00000464867 AHDC1Q5TGY3 1603 aaPredicted RBP15.13■□□□□ 0.01
APP-213ENST00000464867 EHBP1L1Q8N3D4 1523 aa15.12■□□□□ 0.01
APP-213ENST00000464867 LHX8Q68G74 356 aa15.12■□□□□ 0.01
APP-213ENST00000464867 ARHGAP31Q2M1Z3 1444 aa15.11■□□□□ 0.01
APP-213ENST00000464867 CEP162Q5TB80 1403 aa15.11■□□□□ 0.01
APP-213ENST00000464867 MAP3K13O43283 966 aa15.11■□□□□ 0.01
APP-213ENST00000464867 C8orf37Q96NL8 207 aa15.11■□□□□ 0.01
APP-213ENST00000464867 ARHGEF5Q12774 1597 aa15.11■□□□□ 0.01
APP-213ENST00000464867 SETBP1Q9Y6X0 1596 aa15.1■□□□□ 0.01
APP-213ENST00000464867 NCOA3Q9Y6Q9 1424 aa15.09■□□□□ 0.01
APP-213ENST00000464867 PELP1Q8IZL8 1130 aaKnown RBP15.09■□□□□ 0.01
APP-213ENST00000464867 CHD2O14647 1828 aaKnown RBP15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms